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The map label for this gene is yciH [C]

Identifier: 150004195

GI number: 150004195

Start: 2121582

End: 2121920

Strand: Reverse

Name: yciH [C]

Synonym: BVU_1636

Alternate gene names: 150004195

Gene position: 2121920-2121582 (Counterclockwise)

Preceding gene: 150004199

Following gene: 150004183

Centisome position: 41.1

GC content: 39.23

Gene sequence:

>339_bases
ATGAAAAATAACGATTGGAAAGAACGTCTGAATGTGGTTTATTCCACAAATCCTGATTTCAAGTATGAAAGTGTTGAAGA
GGAAGCGGTTGAGACATTAGATAAAAAACAACAGAAACTCCGTGTCAATATAGAAAAAAAAGGACGGGGTGGCAAAACCG
TGACATTAATCAACGGGTTCATCGGAACAGAAAATGACCTGAAAGAGTTGGGTAAATTATTGAAAAGCAAATGTGGAGTA
GGCGGTTCAGTAAAAGACGGGGAGATCCTTATCCAAGGAGAGTTCAAGCAACGGGTCATCGAGTTATTGAAAGCTGAAGG
ATATACCCAGACCAAATAA

Upstream 100 bases:

>100_bases
ATCATTAGGTAATTTGCAAAAGTACACTTTTATTTGTTACATTGACGGATAGAGTATAAAAAAAGTCTTATCTTTGAGTA
TTCATTTAAGCAAAATTCAC

Downstream 100 bases:

>100_bases
CCGGAAAAAAGAAAGGGACTGTTGTCACACAGTCCCCCATTCTATAATTGCGGAAATCTTATTCAGCACGTAAAGTGAAA
CGTTTGAAAGCAACGATCTG

Product: putative translation initiation factor SUI1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MKNNDWKERLNVVYSTNPDFKYESVEEEAVETLDKKQQKLRVNIEKKGRGGKTVTLINGFIGTENDLKELGKLLKSKCGV
GGSVKDGEILIQGEFKQRVIELLKAEGYTQTK

Sequences:

>Translated_112_residues
MKNNDWKERLNVVYSTNPDFKYESVEEEAVETLDKKQQKLRVNIEKKGRGGKTVTLINGFIGTENDLKELGKLLKSKCGV
GGSVKDGEILIQGEFKQRVIELLKAEGYTQTK
>Mature_112_residues
MKNNDWKERLNVVYSTNPDFKYESVEEEAVETLDKKQQKLRVNIEKKGRGGKTVTLINGFIGTENDLKELGKLLKSKCGV
GGSVKDGEILIQGEFKQRVIELLKAEGYTQTK

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022851
- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 12663; Mature: 12663

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNDWKERLNVVYSTNPDFKYESVEEEAVETLDKKQQKLRVNIEKKGRGGKTVTLINGF
CCCCCHHHHCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEECEECCCCCCCEEEEEECC
IGTENDLKELGKLLKSKCGVGGSVKDGEILIQGEFKQRVIELLKAEGYTQTK
CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKNNDWKERLNVVYSTNPDFKYESVEEEAVETLDKKQQKLRVNIEKKGRGGKTVTLINGF
CCCCCHHHHCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEECEECCCCCCCEEEEEECC
IGTENDLKELGKLLKSKCGVGGSVKDGEILIQGEFKQRVIELLKAEGYTQTK
CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479 [H]