| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is yibP [C]
Identifier: 150003978
GI number: 150003978
Start: 1887213
End: 1888547
Strand: Direct
Name: yibP [C]
Synonym: BVU_1412
Alternate gene names: 150003978
Gene position: 1887213-1888547 (Clockwise)
Preceding gene: 150003977
Following gene: 150003979
Centisome position: 36.55
GC content: 43.22
Gene sequence:
>1335_bases ATGAAACGTATCTTCTTACTACTCATAGCCTGCTGCTTTTTAAGTACTATTTCAGCGCAAAGTACTCGGAAAATAAGGGA GCTTGAAGCCAAACGGAAGGAACTTCACCAGCAGATTGCCGAGTCTGAAACTTTGTTGCAATCTACCAAAAAGGATGTGA AAAGCCAGTTGGACAACCTTGCTTTGCTGACAGGTCAGATTGAGGAGAGAAGAAAATATATCAATACCATAGAGAGTGAT GTTCATACATTGACAAGTGAGATCGCTTCTTTACAGAAACAACTGAATAAACTTCAGCGTGATTTGAAAGACAAGAAGCG GAAGTATGAAACTTCGGTGCAATACATGTATCGTAACAAGTCTGTTCAAGAGAAATTAATGTTTATTTTTTCTGCCGAGA ATTTGAGTCAGACTTACCGTCGTATGCGTTATGTGCAGGAATATGCAAACTTCCAGCGCCTTCAAGGAATGGAGATAGAA CGTAAGCAGAAGCAAATTGCCGCTAAAAAAAGAGAAGTGGAACAAACTAAGCATGCCAAACAGAATCTTTTAAAACAGGG TGAGGTTGAAAAGGCCAAACTGGAGATTCAGGAAAAGGAGCGCCAGACTCTTTTGGCGAATTTGCAAAAGAAGCAGAAAG GTATACAAAGCGAGATAAGGAAGAAAAAACGTTCGGCTGAGCAATTGAATGCCCAGATTGACCGTTTGATTGAAATTGAA ATAGAGAAAGCTAGAAAGCGTGCAGAGGAGGAAGCTCGTAGGAAAGCCGCTGCTGAGGCTGCCGCAAAGGCGGCAGCAGC TAAGAAAGCGGAGCGTGAAACTACGGGAGGGGCGTCCCGTTCTAAATCTACGGAAAAAAATGAGTCTACAAAGAAGGTCG CTCCGGTGGAGAAGTTCAGTCTGAATAATGAGGACCGCCAGCTGTCGGGCAGTTTTGAACGTAACCGGGGTATTTTGCCG GTTCCCATTACCGGTCCATACGTGATTGTCAGCCATTACGGACAGTATGCCGTAGATGGTTTGCGTAATGTGAAACTGGA TAATAAAGGGATTGATATCAAGGGCAAACCGGGAGCGCAGGCACGTGCCGTTTTCAATGGAGAAGTTTCGGCTATTTTCC AGTATAATGGTTTGAACAATATACTGGTGCGTCATGGTAATTACATCTCTGTCTATTGCAACCTTTCTTCCGTATCGGTT TCTAAAGGCAGCAAAGTCAATACACGTACCGTTCTTGGTACTATCCATACAGATAGTTCGGGTAATACGGTCTTGCATTT TCAACTTCGTAAGGAAACGGCTAAACTTAATCCGGAATTATGGTTGGGAAGATGA
Upstream 100 bases:
>100_bases CCCGCCTTTCTACCAATAAGGATTGGGAAGCTCATACCGAAGTGCCCGGAAAATACGAAAGAATAGAATTGCAAGATTTG CTAAAACAGCTTATTAAATA
Downstream 100 bases:
>100_bases AAAAGATAAGTTCTCTTTCTGTATTTTATTACTTTGCGGTTTCTCGCAGCTTGTTTGGAAACTGAAGAATTTTCTGTAGT TCCTGTTCCTGAAATTTCTT
Product: putative peptidase
Products: NA
Alternate protein names: Peptidase; M23 Family Peptidase; M23/M37 Family Peptidase; Exported Peptidase; LA Protein; Peptidase Family M; M24/M37 Family Peptidase
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MKRIFLLLIACCFLSTISAQSTRKIRELEAKRKELHQQIAESETLLQSTKKDVKSQLDNLALLTGQIEERRKYINTIESD VHTLTSEIASLQKQLNKLQRDLKDKKRKYETSVQYMYRNKSVQEKLMFIFSAENLSQTYRRMRYVQEYANFQRLQGMEIE RKQKQIAAKKREVEQTKHAKQNLLKQGEVEKAKLEIQEKERQTLLANLQKKQKGIQSEIRKKKRSAEQLNAQIDRLIEIE IEKARKRAEEEARRKAAAEAAAKAAAAKKAERETTGGASRSKSTEKNESTKKVAPVEKFSLNNEDRQLSGSFERNRGILP VPITGPYVIVSHYGQYAVDGLRNVKLDNKGIDIKGKPGAQARAVFNGEVSAIFQYNGLNNILVRHGNYISVYCNLSSVSV SKGSKVNTRTVLGTIHTDSSGNTVLHFQLRKETAKLNPELWLGR
Sequences:
>Translated_444_residues MKRIFLLLIACCFLSTISAQSTRKIRELEAKRKELHQQIAESETLLQSTKKDVKSQLDNLALLTGQIEERRKYINTIESD VHTLTSEIASLQKQLNKLQRDLKDKKRKYETSVQYMYRNKSVQEKLMFIFSAENLSQTYRRMRYVQEYANFQRLQGMEIE RKQKQIAAKKREVEQTKHAKQNLLKQGEVEKAKLEIQEKERQTLLANLQKKQKGIQSEIRKKKRSAEQLNAQIDRLIEIE IEKARKRAEEEARRKAAAEAAAKAAAAKKAERETTGGASRSKSTEKNESTKKVAPVEKFSLNNEDRQLSGSFERNRGILP VPITGPYVIVSHYGQYAVDGLRNVKLDNKGIDIKGKPGAQARAVFNGEVSAIFQYNGLNNILVRHGNYISVYCNLSSVSV SKGSKVNTRTVLGTIHTDSSGNTVLHFQLRKETAKLNPELWLGR >Mature_444_residues MKRIFLLLIACCFLSTISAQSTRKIRELEAKRKELHQQIAESETLLQSTKKDVKSQLDNLALLTGQIEERRKYINTIESD VHTLTSEIASLQKQLNKLQRDLKDKKRKYETSVQYMYRNKSVQEKLMFIFSAENLSQTYRRMRYVQEYANFQRLQGMEIE RKQKQIAAKKREVEQTKHAKQNLLKQGEVEKAKLEIQEKERQTLLANLQKKQKGIQSEIRKKKRSAEQLNAQIDRLIEIE IEKARKRAEEEARRKAAAEAAAKAAAAKKAERETTGGASRSKSTEKNESTKKVAPVEKFSLNNEDRQLSGSFERNRGILP VPITGPYVIVSHYGQYAVDGLRNVKLDNKGIDIKGKPGAQARAVFNGEVSAIFQYNGLNNILVRHGNYISVYCNLSSVSV SKGSKVNTRTVLGTIHTDSSGNTVLHFQLRKETAKLNPELWLGR
Specific function: Unknown
COG id: COG4942
COG function: function code D; Membrane-bound metallopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50693; Mature: 50693
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIFLLLIACCFLSTISAQSTRKIRELEAKRKELHQQIAESETLLQSTKKDVKSQLDNL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLTGQIEERRKYINTIESDVHTLTSEIASLQKQLNKLQRDLKDKKRKYETSVQYMYRNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH SVQEKLMFIFSAENLSQTYRRMRYVQEYANFQRLQGMEIERKQKQIAAKKREVEQTKHAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH QNLLKQGEVEKAKLEIQEKERQTLLANLQKKQKGIQSEIRKKKRSAEQLNAQIDRLIEIE HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEKARKRAEEEARRKAAAEAAAKAAAAKKAERETTGGASRSKSTEKNESTKKVAPVEKFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHC LNNEDRQLSGSFERNRGILPVPITGPYVIVSHYGQYAVDGLRNVKLDNKGIDIKGKPGAQ CCCCCHHHCCCHHHCCCEEEECCCCCEEEEHHCCHHHHHHHHCCEECCCCCCCCCCCCCC ARAVFNGEVSAIFQYNGLNNILVRHGNYISVYCNLSSVSVSKGSKVNTRTVLGTIHTDSS EEEEECCCEEEEEEECCCCCEEEECCCEEEEEEEECEEECCCCCCCCCEEEEEEEEECCC GNTVLHFQLRKETAKLNPELWLGR CCEEEEEEEEHHHHHCCCCCCCCC >Mature Secondary Structure MKRIFLLLIACCFLSTISAQSTRKIRELEAKRKELHQQIAESETLLQSTKKDVKSQLDNL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLTGQIEERRKYINTIESDVHTLTSEIASLQKQLNKLQRDLKDKKRKYETSVQYMYRNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH SVQEKLMFIFSAENLSQTYRRMRYVQEYANFQRLQGMEIERKQKQIAAKKREVEQTKHAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH QNLLKQGEVEKAKLEIQEKERQTLLANLQKKQKGIQSEIRKKKRSAEQLNAQIDRLIEIE HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEKARKRAEEEARRKAAAEAAAKAAAAKKAERETTGGASRSKSTEKNESTKKVAPVEKFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHC LNNEDRQLSGSFERNRGILPVPITGPYVIVSHYGQYAVDGLRNVKLDNKGIDIKGKPGAQ CCCCCHHHCCCHHHCCCEEEECCCCCEEEEHHCCHHHHHHHHCCEECCCCCCCCCCCCCC ARAVFNGEVSAIFQYNGLNNILVRHGNYISVYCNLSSVSVSKGSKVNTRTVLGTIHTDSS EEEEECCCEEEEEEECCCCCEEEECCCEEEEEEEECEEECCCCCCCCCEEEEEEEEECCC GNTVLHFQLRKETAKLNPELWLGR CCEEEEEEEEHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA