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The map label for this gene is sufC [C]

Identifier: 150003925

GI number: 150003925

Start: 1810710

End: 1811462

Strand: Direct

Name: sufC [C]

Synonym: BVU_1358

Alternate gene names: 150003925

Gene position: 1810710-1811462 (Clockwise)

Preceding gene: 150003924

Following gene: 150003926

Centisome position: 35.07

GC content: 44.75

Gene sequence:

>753_bases
ATGTTAGAGATAAAAGACTTACATGCCAGTGTCAATGGCAAAGAAATATTGAAAGGTATTAATCTAAGCATAAAGAAAGG
TGAAGTTCATGCTATTATGGGACCCAACGGTTCCGGAAAGAGTACCCTTTCGTCTGTGTTGGTAGGCAATCCGGCTTTTG
AGGTAACGAAAGGTTCGGTGACTTTTGAAGGAAAAGATTTGTTGGCTTTGAGTCCTGAGGATCGCAGTCATGAAGGTCTG
TTTTTGTCTTTCCAATATCCGGTGGAGATTCCCGGAGTCAGTATGGTGAACTTTATGCGTGCGGCGGTAAACGAGCAGCG
TAAATATAAAGGCCTCCCTGCATTGACAGCCAGTGAGTTCTTGAAGCTGATGCGCGAGAAGCGGGCTGTGGTGGAATTGG
ATAATAAATTGGCAAACCGTTCGGTAAACGAGGGATTCAGCGGTGGTGAGAAGAAGCGCAATGAGATCTTCCAGATGGCT
ATGCTGGAACCTAAGTTGAGCATTTTGGATGAAACGGATTCCGGTCTTGATATTGATGCGTTGCGTATTGTAGCCGAGGG
TGTGAACAAACTGAAGACTCCCGAAACAAGTTGTATCGTCATTACGCACTATCAACGGTTGCTGGATTATATCAAACCCG
ATATTGTACATGTATTGTATAAAGGACGTATTGTGAAGACTGCGGGTCCTGAATTGGCTTTGGAACTGGAAGAGCGTGGT
TACGACTGGATAAAAGCCGAGTTGGGAGAATAA

Upstream 100 bases:

>100_bases
TAAACTTCCAATGGAGTTTGCGGTGGAGGCACAGAAACTGCTGGCTATTTCTCTAGAGGGAAGTGTAGGATAAATGAAGA
ACTAAGAATTTAATAGAATT

Downstream 100 bases:

>100_bases
TAATTTGATGCCTAAAGAAGAAAGTGATTATGAGAGCAGAACAACAATATATTGATCTCTTTTCTCAATGTGAGGCGATG
ATTTGCCGGCATAGTGCCGA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MLEIKDLHASVNGKEILKGINLSIKKGEVHAIMGPNGSGKSTLSSVLVGNPAFEVTKGSVTFEGKDLLALSPEDRSHEGL
FLSFQYPVEIPGVSMVNFMRAAVNEQRKYKGLPALTASEFLKLMREKRAVVELDNKLANRSVNEGFSGGEKKRNEIFQMA
MLEPKLSILDETDSGLDIDALRIVAEGVNKLKTPETSCIVITHYQRLLDYIKPDIVHVLYKGRIVKTAGPELALELEERG
YDWIKAELGE

Sequences:

>Translated_250_residues
MLEIKDLHASVNGKEILKGINLSIKKGEVHAIMGPNGSGKSTLSSVLVGNPAFEVTKGSVTFEGKDLLALSPEDRSHEGL
FLSFQYPVEIPGVSMVNFMRAAVNEQRKYKGLPALTASEFLKLMREKRAVVELDNKLANRSVNEGFSGGEKKRNEIFQMA
MLEPKLSILDETDSGLDIDALRIVAEGVNKLKTPETSCIVITHYQRLLDYIKPDIVHVLYKGRIVKTAGPELALELEERG
YDWIKAELGE
>Mature_250_residues
MLEIKDLHASVNGKEILKGINLSIKKGEVHAIMGPNGSGKSTLSSVLVGNPAFEVTKGSVTFEGKDLLALSPEDRSHEGL
FLSFQYPVEIPGVSMVNFMRAAVNEQRKYKGLPALTASEFLKLMREKRAVVELDNKLANRSVNEGFSGGEKKRNEIFQMA
MLEPKLSILDETDSGLDIDALRIVAEGVNKLKTPETSCIVITHYQRLLDYIKPDIVHVLYKGRIVKTAGPELALELEERG
YDWIKAELGE

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI42741659, Length=216, Percent_Identity=28.7037037037037, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI156105685, Length=214, Percent_Identity=28.5046728971963, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI255708477, Length=226, Percent_Identity=33.6283185840708, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI9961252, Length=230, Percent_Identity=27.8260869565217, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI4505771, Length=230, Percent_Identity=27.8260869565217, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI9961250, Length=230, Percent_Identity=27.8260869565217, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI1787972, Length=247, Percent_Identity=61.5384615384615, Blast_Score=315, Evalue=2e-87,
Organism=Escherichia coli, GI1789891, Length=227, Percent_Identity=30.8370044052863, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI87081791, Length=233, Percent_Identity=27.4678111587983, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786319, Length=204, Percent_Identity=30.3921568627451, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786654, Length=235, Percent_Identity=25.1063829787234, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787500, Length=214, Percent_Identity=30.8411214953271, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI87081709, Length=234, Percent_Identity=25.2136752136752, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790525, Length=198, Percent_Identity=29.7979797979798, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1788225, Length=233, Percent_Identity=30.0429184549356, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787792, Length=177, Percent_Identity=27.1186440677966, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789864, Length=260, Percent_Identity=24.6153846153846, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1790190, Length=200, Percent_Identity=26.5, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788761, Length=231, Percent_Identity=25.5411255411255, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI48995001, Length=241, Percent_Identity=25.3112033195021, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI48994883, Length=241, Percent_Identity=29.8755186721992, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787029, Length=237, Percent_Identity=26.5822784810127, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787113, Length=223, Percent_Identity=27.8026905829596, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17541710, Length=218, Percent_Identity=27.9816513761468, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI193209708, Length=240, Percent_Identity=28.75, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17567269, Length=236, Percent_Identity=27.1186440677966, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=218, Percent_Identity=27.9816513761468, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17543740, Length=211, Percent_Identity=29.3838862559242, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI115535101, Length=236, Percent_Identity=25.4237288135593, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193202349, Length=246, Percent_Identity=27.6422764227642, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17567265, Length=234, Percent_Identity=25.2136752136752, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115533592, Length=216, Percent_Identity=29.1666666666667, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6324498, Length=253, Percent_Identity=25.6916996047431, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27653; Mature: 27653

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEIKDLHASVNGKEILKGINLSIKKGEVHAIMGPNGSGKSTLSSVLVGNPAFEVTKGSV
CCEECHHHCCCCHHHHHHCCCCEEECCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCEE
TFEGKDLLALSPEDRSHEGLFLSFQYPVEIPGVSMVNFMRAAVNEQRKYKGLPALTASEF
EECCCEEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LKLMREKRAVVELDNKLANRSVNEGFSGGEKKRNEIFQMAMLEPKLSILDETDSGLDIDA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHEECCCCCCCCHHH
LRIVAEGVNKLKTPETSCIVITHYQRLLDYIKPDIVHVLYKGRIVKTAGPELALELEERG
HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCHHHHHHHHCCEEEEECCCCEEEEEHHCC
YDWIKAELGE
CCEEHHCCCC
>Mature Secondary Structure
MLEIKDLHASVNGKEILKGINLSIKKGEVHAIMGPNGSGKSTLSSVLVGNPAFEVTKGSV
CCEECHHHCCCCHHHHHHCCCCEEECCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCEE
TFEGKDLLALSPEDRSHEGLFLSFQYPVEIPGVSMVNFMRAAVNEQRKYKGLPALTASEF
EECCCEEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LKLMREKRAVVELDNKLANRSVNEGFSGGEKKRNEIFQMAMLEPKLSILDETDSGLDIDA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHEECCCCCCCCHHH
LRIVAEGVNKLKTPETSCIVITHYQRLLDYIKPDIVHVLYKGRIVKTAGPELALELEERG
HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCHHHHHHHHCCEEEEECCCCEEEEEHHCC
YDWIKAELGE
CCEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]