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The map label for this gene is sufD [C]

Identifier: 150003926

GI number: 150003926

Start: 1811492

End: 1812835

Strand: Direct

Name: sufD [C]

Synonym: BVU_1359

Alternate gene names: 150003926

Gene position: 1811492-1812835 (Clockwise)

Preceding gene: 150003925

Following gene: 150003927

Centisome position: 35.08

GC content: 44.12

Gene sequence:

>1344_bases
ATGAGAGCAGAACAACAATATATTGATCTCTTTTCTCAATGTGAGGCGATGATTTGCCGGCATAGTGCCGAGGTGCTGAA
CGCTCCCCGTGCGCAAGCTTTCGCAGATTTCGAAAAATTAGGTTTCCCTACCCGCAAACAGGAGAAGTATAAATATACGG
ATGTGAGCAAGTTGTTCGAGCCGGATTATGGTTTGAATTTGAACAGACTCGACATTCCGGTGAATCCGTATGAAGTGTTC
AAGTGCGATGTACCTAATATGAGTACCGCTCTTTATTTTGTAGTAAACGATGCTTTTTATCGTAAGGCTTTGCCGAAGGC
ACAATTGCCGGAAGGAGTGTTGCTTGGCAGCTTGAAAGAGCTGTCTGAACAATATCCGGCTTTGGTCAAGCAGTATTATG
GCAAGTTGGCAGATACTTCCAAGGATGGTGTGACCGCCTTCAATACTACTTTTGCCCAGGATGGCTTTATGCTGTATGTG
CCGAAAGGCGTGGTGGTGGACAAACCCATTCAACTGGTGAACATATTGCGTGCTGATGTTAATTTTATGGTGAACCGCCG
TGTGCTGGTTGTGCTGGAAGAAGGTGCGCAGGCTCGTCTGTTGATTTGTGATCATGCCATGGATAATGTAAATTTCCTTT
CTACTCAGGTTATTGAGGTCTTTGCAAAAGAAAATGCTACTTTCGATCTTTATGAACTGGAAGAAACCCATACCAGCACA
GTGCGTTTCAGTAACCTCTATGTGAACCAGGAGGCAGACAGTAATGTGCTTTTGAATGGTATGACTTTGCATAACGGTAC
TACGCGTAATACAACTGAAGTAACTTTGGCCGGACGTGGAGCTGAGATCAATTTGTGTGGTATGGTCATTGCCGATAAGA
ATGAACAGGTGGACAATCATACTTTCATTGACCACAAGGTTGCTGATTGCACTAGTAATGAGCTGTTTAAATATGTATTG
GATGATCAGGCGACAGGTGCGTTTGCCGGAAAAGTATTGGTACGTGAAGGAGCACAACATACTAATTCCCAACAAACCAA
CCGCAACCTCTGTGCTACTCGTGATGCCCATATGTACACTCAGCCGCAACTGGAAATTTATGCGGATGACGTAAAGTGCT
CTCACGGAGCTACTGTCGGTCAGCTGGATGAAAATGCGTTGTTCTATATGCAACAGCGTGGTATCAGTCTGAAGGAAGCA
CGTTTATTGCTTATGTTTGCTTTTGTCAATGAAGTAATAGATACGATCCGCCTGGATGCATTGAAAGACCGTTTGCATCT
GTTGGTGGAAAAACGTTTCCGTGGTGAGTTGAATAAATGTCAGGGATGTGCGATATGTAAATAA

Upstream 100 bases:

>100_bases
CGGGTCCTGAATTGGCTTTGGAACTGGAAGAGCGTGGTTACGACTGGATAAAAGCCGAGTTGGGAGAATAATAATTTGAT
GCCTAAAGAAGAAAGTGATT

Downstream 100 bases:

>100_bases
GACGCCATGTACGATATACAAAAAATAAGAGAAGATTTTCCGATATTAGATCGGGAGGTGTATGGAAAGCCGCTTATTTA
TCTGGATAATGGGGCTACCA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MRAEQQYIDLFSQCEAMICRHSAEVLNAPRAQAFADFEKLGFPTRKQEKYKYTDVSKLFEPDYGLNLNRLDIPVNPYEVF
KCDVPNMSTALYFVVNDAFYRKALPKAQLPEGVLLGSLKELSEQYPALVKQYYGKLADTSKDGVTAFNTTFAQDGFMLYV
PKGVVVDKPIQLVNILRADVNFMVNRRVLVVLEEGAQARLLICDHAMDNVNFLSTQVIEVFAKENATFDLYELEETHTST
VRFSNLYVNQEADSNVLLNGMTLHNGTTRNTTEVTLAGRGAEINLCGMVIADKNEQVDNHTFIDHKVADCTSNELFKYVL
DDQATGAFAGKVLVREGAQHTNSQQTNRNLCATRDAHMYTQPQLEIYADDVKCSHGATVGQLDENALFYMQQRGISLKEA
RLLLMFAFVNEVIDTIRLDALKDRLHLLVEKRFRGELNKCQGCAICK

Sequences:

>Translated_447_residues
MRAEQQYIDLFSQCEAMICRHSAEVLNAPRAQAFADFEKLGFPTRKQEKYKYTDVSKLFEPDYGLNLNRLDIPVNPYEVF
KCDVPNMSTALYFVVNDAFYRKALPKAQLPEGVLLGSLKELSEQYPALVKQYYGKLADTSKDGVTAFNTTFAQDGFMLYV
PKGVVVDKPIQLVNILRADVNFMVNRRVLVVLEEGAQARLLICDHAMDNVNFLSTQVIEVFAKENATFDLYELEETHTST
VRFSNLYVNQEADSNVLLNGMTLHNGTTRNTTEVTLAGRGAEINLCGMVIADKNEQVDNHTFIDHKVADCTSNELFKYVL
DDQATGAFAGKVLVREGAQHTNSQQTNRNLCATRDAHMYTQPQLEIYADDVKCSHGATVGQLDENALFYMQQRGISLKEA
RLLLMFAFVNEVIDTIRLDALKDRLHLLVEKRFRGELNKCQGCAICK
>Mature_447_residues
MRAEQQYIDLFSQCEAMICRHSAEVLNAPRAQAFADFEKLGFPTRKQEKYKYTDVSKLFEPDYGLNLNRLDIPVNPYEVF
KCDVPNMSTALYFVVNDAFYRKALPKAQLPEGVLLGSLKELSEQYPALVKQYYGKLADTSKDGVTAFNTTFAQDGFMLYV
PKGVVVDKPIQLVNILRADVNFMVNRRVLVVLEEGAQARLLICDHAMDNVNFLSTQVIEVFAKENATFDLYELEETHTST
VRFSNLYVNQEADSNVLLNGMTLHNGTTRNTTEVTLAGRGAEINLCGMVIADKNEQVDNHTFIDHKVADCTSNELFKYVL
DDQATGAFAGKVLVREGAQHTNSQQTNRNLCATRDAHMYTQPQLEIYADDVKCSHGATVGQLDENALFYMQQRGISLKEA
RLLLMFAFVNEVIDTIRLDALKDRLHLLVEKRFRGELNKCQGCAICK

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=401, Percent_Identity=26.9326683291771, Blast_Score=141, Evalue=9e-35,
Organism=Escherichia coli, GI87081955, Length=329, Percent_Identity=21.580547112462, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 50471; Mature: 50471

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAEQQYIDLFSQCEAMICRHSAEVLNAPRAQAFADFEKLGFPTRKQEKYKYTDVSKLFE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHC
PDYGLNLNRLDIPVNPYEVFKCDVPNMSTALYFVVNDAFYRKALPKAQLPEGVLLGSLKE
CCCCCCCEEEECCCCCCEEEEECCCCCCEEEEEEEECHHHHHCCCCCCCCCCHHHHHHHH
LSEQYPALVKQYYGKLADTSKDGVTAFNTTFAQDGFMLYVPKGVVVDKPIQLVNILRADV
HHHHHHHHHHHHHHHHCCCCCCCCEEEECEECCCCEEEEECCCCEECCHHHHHHHHHHHH
NFMVNRRVLVVLEEGAQARLLICDHAMDNVNFLSTQVIEVFAKENATFDLYELEETHTST
HHEECCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCE
VRFSNLYVNQEADSNVLLNGMTLHNGTTRNTTEVTLAGRGAEINLCGMVIADKNEQVDNH
EEEEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCC
TFIDHKVADCTSNELFKYVLDDQATGAFAGKVLVREGAQHTNSQQTNRNLCATRDAHMYT
EECCCCHHCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE
QPQLEIYADDVKCSHGATVGQLDENALFYMQQRGISLKEARLLLMFAFVNEVIDTIRLDA
CCCEEEEECCEECCCCCCCCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKDRLHLLVEKRFRGELNKCQGCAICK
HHHHHHHHHHHHHCCCHHHCCCCCCCC
>Mature Secondary Structure
MRAEQQYIDLFSQCEAMICRHSAEVLNAPRAQAFADFEKLGFPTRKQEKYKYTDVSKLFE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHC
PDYGLNLNRLDIPVNPYEVFKCDVPNMSTALYFVVNDAFYRKALPKAQLPEGVLLGSLKE
CCCCCCCEEEECCCCCCEEEEECCCCCCEEEEEEEECHHHHHCCCCCCCCCCHHHHHHHH
LSEQYPALVKQYYGKLADTSKDGVTAFNTTFAQDGFMLYVPKGVVVDKPIQLVNILRADV
HHHHHHHHHHHHHHHHCCCCCCCCEEEECEECCCCEEEEECCCCEECCHHHHHHHHHHHH
NFMVNRRVLVVLEEGAQARLLICDHAMDNVNFLSTQVIEVFAKENATFDLYELEETHTST
HHEECCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCE
VRFSNLYVNQEADSNVLLNGMTLHNGTTRNTTEVTLAGRGAEINLCGMVIADKNEQVDNH
EEEEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCC
TFIDHKVADCTSNELFKYVLDDQATGAFAGKVLVREGAQHTNSQQTNRNLCATRDAHMYT
EECCCCHHCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE
QPQLEIYADDVKCSHGATVGQLDENALFYMQQRGISLKEARLLLMFAFVNEVIDTIRLDA
CCCEEEEECCEECCCCCCCCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKDRLHLLVEKRFRGELNKCQGCAICK
HHHHHHHHHHHHHCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]