| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150003854
Identifier: 150003854
GI number: 150003854
Start: 1732643
End: 1735369
Strand: Reverse
Name: 150003854
Synonym: BVU_1286
Alternate gene names: NA
Gene position: 1735369-1732643 (Counterclockwise)
Preceding gene: 150003855
Following gene: 150003853
Centisome position: 33.61
GC content: 37.88
Gene sequence:
>2727_bases ATGAACAAAAAATTTTTAAGTGCAATCCTGTTCGGAGCCTTGATGGTTTCTTCGACAGGAACATTTGTATCTTGTAAAGA CTATGATGATGACATAGACAATTTGCAGGAACAAATTAACAAACTGGCGACTAAGGAGGACATGACTTCTCAGATCGCTA CTTTGCAAGCTGCTTTAACTACTGCTGCAAAAGATGCAAGCGATGCTCTTGCTAAAGCAACTGCCGCTGAAACCGCTGCA AAAGCTGCTGGTGATGCTGCCGCTGCTGCAAAAGCCGCTGCAGACAAAGCTGTTGCAGATGCAAAGGCAGAAGCAATCAA AGCTGTACAAGCAGAAATTGAGACATTGAAAAAAGAAGTAGAAGAATCCACTGACGCAGCATTGAAAGAAATGGCAGAAA AAGTTGATGCTGCCACTAAGAAAGTAGAAGACATTGTAGGCAAGATTGCTGATATGGTTACTAGTGTAGAACTGGTGGCT TCGTATTCTGCTAATCCTACAGGCGATGAATTGATTTTCTCCACTGCTATTGAAAAAGAAAACGTATTTAGTGAAGGTAT TACAAATGCTATAACATTTACTAAGGGTAAACAAGTTCAGACTGGTGACAAGTTTGTAGTACGTGTATCTCCGACAAATG CGGTTCTTACTCCTGATATGATTTCTTTGACTAATAGCCAAGGACAGAACTTGAATGAATTTTTATCTGTTCAGAAAGTT GAGAAATATAATGGATTATTAAGCCGTGCGGCAGGAAACAACGGATTGTGGGAAGTTACAGTTGCTTTGAAGAATTATGA TGAAAAAGCTTTTTCTGCTGTAACAGAAACCAAAGTTGGCAATGATACTGAATCTATTCTCTTTGCTGTACAGGTAAATA ACACCTTGTCTACTGCTGAAACAAGAGAAGTTATTTCATCTTATGACTTAACTTTGGATTGGACTGAATATGTAGGTGAA AAGTCTTTAAACTATTTTGTTGATGCAACAAACGTCAAGGATATTCATAATCGTTTCACTAAAGCAGAAGATGGTACTAA TGTAACATATCAAGAATTAGCTTGGAAGAGTGATGCGGCTACTACCATTATTCCTTTAGATAAGGTTAATACAAATGTTA AAGTAGATAACGGAGACGACCGTCAAACTCAAAAATTATATCCTGCAGTACAAGGAGAGGCTATCAAAATTGCTTTGTCT ACAGCCGATGATAAAGTAACAGCTCCGGTAAATATCCGTGGTATTTATGTAGTTTTAGATAAGGCTAATGCGGTAGAATC TGCACCGTCTGAATTGAATGCATGGAATAGCTATACTTATTCTGGTTTGAATACAGTGGTTGAAGGTACTTCTACAGAAA TTACCATCAACAGCACTACGGCTATTAATGATGTTATTGGTTTCCGTGTATATGCTGTAAACTTTGATGGTACTTTAGTT GATCCTGATGGTAAAGCGTTTTATGTGCAGTTAGGTAATGCTGCTACAGATTGGAATGCTACTGCCACTACTGTTACTGC ACTTAATCCGACTGACAAAGCTGTTACTGACACTCAGTCAGATAAGGTTGCTGTGTCTTTGACTAAGTTAACTGCTCCGA CTGCTGCTACTTGGACTACAGACAAGGTTAATAATGTAAATCCTGCATTCAATGCTATCTTTGTTGATGCTAATAATAAT GTACTGTACAATACAGCTGCTCCAAATACATTCCCGGCAGATTTCAGCAAGGTTGCCAAAGTTTATACTGTTCCGACTGT TGATGACTGGACCAAGTATGAAGATAACAAAACTTATAATGGAACATTGACTATCAAGAATGCTTCAGGACATGTATTAG CCACTATGAAAGTTTCTATGACTAAGGTATTGCCTACTACTATTCCTGCGGGATTCTCTGTTAAAACTGCACAGGTTACT GATGGCATCTATAATTGTTACATGATTCCTATGAATGACGCCAATGATATCGCTTGGACAGCTGAAACAGCTACAAAGGG TTCTATGAAGATGTCTGAAGTATTCAACTATGGTACAGGTGCTGCCGCTAACTATAACATAACATTCGCTACATCTAAGA AAGATGGAAATAAAGATGTTGCTGTAGTAGTTGCCGGAGACAAAACATTAGAAGTTGCTAAAGATTACATCAACAACTCA GTTAAACATACCACTACAGTGGTTTACAACTATGGTAAGATTTCTTCAGTGAAGAATTCTGAAGGTGGTTATGATGATGT AACTAGAGAAGCTGAAAGATTTGAAACTATCTACAACTGTATTTATAATAGCACTTATACTTGGGCATGGGCTACTCGCG AACAATTAGGCGCTCCGTATACAGATAAGGATAGCGACGGTAATTATACCACTGCAATGCCGTCTACAAAATTAACTTAT GGTACAGATCGTCTTGACTTTGCTGCTGACAGCTTCATTTTTGGAACAAGTGCTAAAGATAGCAGATATAGCAAACTGTT AAGTACACCTTATGAATCAAGTCTGATTATTACAGATGCGACTTTGACCAGTGATGCAAATGGTGAAGAAGAATACTTTG ATGTAATTATAGATAATAATAAGCATATTACAGGTTTCAAGGCTACTGCTTTGTCTTCTGAAACGAATCCGACTGCTGCT GTTCCTTCTACATTGACTATCAAGTGCAAGGATATGTATGGTCACGATGTAATAATTAAAGTTGCTATGACTGTTAACAA ACGATAA
Upstream 100 bases:
>100_bases TCGCAGAGTCGGAATCCTTTTATGGTTCAACGCAATTAAGTCCTTTTATAACAATAAACATTTTGAGTTTTTAAATTTAT AAATTTAAAGTTTTTCTATT
Downstream 100 bases:
>100_bases CATAGAAGAATAGATTATGCTTTAAATGTATATTCTTTCTATTACTCTATAAAGAACGAAGGTGTGTCAAAATGCACACC TTCTGTTTTTTACGCACAAA
Product: putative cell surface protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 908; Mature: 908
Protein sequence:
>908_residues MNKKFLSAILFGALMVSSTGTFVSCKDYDDDIDNLQEQINKLATKEDMTSQIATLQAALTTAAKDASDALAKATAAETAA KAAGDAAAAAKAAADKAVADAKAEAIKAVQAEIETLKKEVEESTDAALKEMAEKVDAATKKVEDIVGKIADMVTSVELVA SYSANPTGDELIFSTAIEKENVFSEGITNAITFTKGKQVQTGDKFVVRVSPTNAVLTPDMISLTNSQGQNLNEFLSVQKV EKYNGLLSRAAGNNGLWEVTVALKNYDEKAFSAVTETKVGNDTESILFAVQVNNTLSTAETREVISSYDLTLDWTEYVGE KSLNYFVDATNVKDIHNRFTKAEDGTNVTYQELAWKSDAATTIIPLDKVNTNVKVDNGDDRQTQKLYPAVQGEAIKIALS TADDKVTAPVNIRGIYVVLDKANAVESAPSELNAWNSYTYSGLNTVVEGTSTEITINSTTAINDVIGFRVYAVNFDGTLV DPDGKAFYVQLGNAATDWNATATTVTALNPTDKAVTDTQSDKVAVSLTKLTAPTAATWTTDKVNNVNPAFNAIFVDANNN VLYNTAAPNTFPADFSKVAKVYTVPTVDDWTKYEDNKTYNGTLTIKNASGHVLATMKVSMTKVLPTTIPAGFSVKTAQVT DGIYNCYMIPMNDANDIAWTAETATKGSMKMSEVFNYGTGAAANYNITFATSKKDGNKDVAVVVAGDKTLEVAKDYINNS VKHTTTVVYNYGKISSVKNSEGGYDDVTREAERFETIYNCIYNSTYTWAWATREQLGAPYTDKDSDGNYTTAMPSTKLTY GTDRLDFAADSFIFGTSAKDSRYSKLLSTPYESSLIITDATLTSDANGEEEYFDVIIDNNKHITGFKATALSSETNPTAA VPSTLTIKCKDMYGHDVIIKVAMTVNKR
Sequences:
>Translated_908_residues MNKKFLSAILFGALMVSSTGTFVSCKDYDDDIDNLQEQINKLATKEDMTSQIATLQAALTTAAKDASDALAKATAAETAA KAAGDAAAAAKAAADKAVADAKAEAIKAVQAEIETLKKEVEESTDAALKEMAEKVDAATKKVEDIVGKIADMVTSVELVA SYSANPTGDELIFSTAIEKENVFSEGITNAITFTKGKQVQTGDKFVVRVSPTNAVLTPDMISLTNSQGQNLNEFLSVQKV EKYNGLLSRAAGNNGLWEVTVALKNYDEKAFSAVTETKVGNDTESILFAVQVNNTLSTAETREVISSYDLTLDWTEYVGE KSLNYFVDATNVKDIHNRFTKAEDGTNVTYQELAWKSDAATTIIPLDKVNTNVKVDNGDDRQTQKLYPAVQGEAIKIALS TADDKVTAPVNIRGIYVVLDKANAVESAPSELNAWNSYTYSGLNTVVEGTSTEITINSTTAINDVIGFRVYAVNFDGTLV DPDGKAFYVQLGNAATDWNATATTVTALNPTDKAVTDTQSDKVAVSLTKLTAPTAATWTTDKVNNVNPAFNAIFVDANNN VLYNTAAPNTFPADFSKVAKVYTVPTVDDWTKYEDNKTYNGTLTIKNASGHVLATMKVSMTKVLPTTIPAGFSVKTAQVT DGIYNCYMIPMNDANDIAWTAETATKGSMKMSEVFNYGTGAAANYNITFATSKKDGNKDVAVVVAGDKTLEVAKDYINNS VKHTTTVVYNYGKISSVKNSEGGYDDVTREAERFETIYNCIYNSTYTWAWATREQLGAPYTDKDSDGNYTTAMPSTKLTY GTDRLDFAADSFIFGTSAKDSRYSKLLSTPYESSLIITDATLTSDANGEEEYFDVIIDNNKHITGFKATALSSETNPTAA VPSTLTIKCKDMYGHDVIIKVAMTVNKR >Mature_908_residues MNKKFLSAILFGALMVSSTGTFVSCKDYDDDIDNLQEQINKLATKEDMTSQIATLQAALTTAAKDASDALAKATAAETAA KAAGDAAAAAKAAADKAVADAKAEAIKAVQAEIETLKKEVEESTDAALKEMAEKVDAATKKVEDIVGKIADMVTSVELVA SYSANPTGDELIFSTAIEKENVFSEGITNAITFTKGKQVQTGDKFVVRVSPTNAVLTPDMISLTNSQGQNLNEFLSVQKV EKYNGLLSRAAGNNGLWEVTVALKNYDEKAFSAVTETKVGNDTESILFAVQVNNTLSTAETREVISSYDLTLDWTEYVGE KSLNYFVDATNVKDIHNRFTKAEDGTNVTYQELAWKSDAATTIIPLDKVNTNVKVDNGDDRQTQKLYPAVQGEAIKIALS TADDKVTAPVNIRGIYVVLDKANAVESAPSELNAWNSYTYSGLNTVVEGTSTEITINSTTAINDVIGFRVYAVNFDGTLV DPDGKAFYVQLGNAATDWNATATTVTALNPTDKAVTDTQSDKVAVSLTKLTAPTAATWTTDKVNNVNPAFNAIFVDANNN VLYNTAAPNTFPADFSKVAKVYTVPTVDDWTKYEDNKTYNGTLTIKNASGHVLATMKVSMTKVLPTTIPAGFSVKTAQVT DGIYNCYMIPMNDANDIAWTAETATKGSMKMSEVFNYGTGAAANYNITFATSKKDGNKDVAVVVAGDKTLEVAKDYINNS VKHTTTVVYNYGKISSVKNSEGGYDDVTREAERFETIYNCIYNSTYTWAWATREQLGAPYTDKDSDGNYTTAMPSTKLTY GTDRLDFAADSFIFGTSAKDSRYSKLLSTPYESSLIITDATLTSDANGEEEYFDVIIDNNKHITGFKATALSSETNPTAA VPSTLTIKCKDMYGHDVIIKVAMTVNKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97921; Mature: 97921
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKFLSAILFGALMVSSTGTFVSCKDYDDDIDNLQEQINKLATKEDMTSQIATLQAALT CCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAAKDASDALAKATAAETAAKAAGDAAAAAKAAADKAVADAKAEAIKAVQAEIETLKKEV HHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EESTDAALKEMAEKVDAATKKVEDIVGKIADMVTSVELVASYSANPTGDELIFSTAIEKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEHHCHH NVFSEGITNAITFTKGKQVQTGDKFVVRVSPTNAVLTPDMISLTNSQGQNLNEFLSVQKV HHHHHCCCCEEEECCCCEEECCCEEEEEECCCCEEECCHHHEECCCCCCCHHHHHHHHHH EKYNGLLSRAAGNNGLWEVTVALKNYDEKAFSAVTETKVGNDTESILFAVQVNNTLSTAE HHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHH TREVISSYDLTLDWTEYVGEKSLNYFVDATNVKDIHNRFTKAEDGTNVTYQELAWKSDAA HHHHHHHCCCEEEHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCHHHHEECCCCC TTIIPLDKVNTNVKVDNGDDRQTQKLYPAVQGEAIKIALSTADDKVTAPVNIRGIYVVLD EEEEEECCCCCEEEECCCCCCHHHHHCCCCCCCEEEEEEECCCCCEECCEEEEEEEEEEE KANAVESAPSELNAWNSYTYSGLNTVVEGTSTEITINSTTAINDVIGFRVYAVNFDGTLV CCCCCCCCCHHHCCCCCEEECCCHHHCCCCCEEEEEECCCHHHHCEEEEEEEEECCCEEE DPDGKAFYVQLGNAATDWNATATTVTALNPTDKAVTDTQSDKVAVSLTKLTAPTAATWTT CCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCEEEC DKVNNVNPAFNAIFVDANNNVLYNTAAPNTFPADFSKVAKVYTVPTVDDWTKYEDNKTYN CCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCHHHHEEEEECCCCCCCCCCCCCCEEE GTLTIKNASGHVLATMKVSMTKVLPTTIPAGFSVKTAQVTDGIYNCYMIPMNDANDIAWT EEEEEECCCCCEEEEEEEEEHHHCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCEEEE AETATKGSMKMSEVFNYGTGAAANYNITFATSKKDGNKDVAVVVAGDKTLEVAKDYINNS ECCCCCCCEEHHHHHCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHCCC VKHTTTVVYNYGKISSVKNSEGGYDDVTREAERFETIYNCIYNSTYTWAWATREQLGAPY CCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCC TDKDSDGNYTTAMPSTKLTYGTDRLDFAADSFIFGTSAKDSRYSKLLSTPYESSLIITDA CCCCCCCCEEEECCCCEEEECCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCEEEEEEE TLTSDANGEEEYFDVIIDNNKHITGFKATALSSETNPTAAVPSTLTIKCKDMYGHDVIIK EECCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEE VAMTVNKR EEEEECCC >Mature Secondary Structure MNKKFLSAILFGALMVSSTGTFVSCKDYDDDIDNLQEQINKLATKEDMTSQIATLQAALT CCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAAKDASDALAKATAAETAAKAAGDAAAAAKAAADKAVADAKAEAIKAVQAEIETLKKEV HHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EESTDAALKEMAEKVDAATKKVEDIVGKIADMVTSVELVASYSANPTGDELIFSTAIEKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEHHCHH NVFSEGITNAITFTKGKQVQTGDKFVVRVSPTNAVLTPDMISLTNSQGQNLNEFLSVQKV HHHHHCCCCEEEECCCCEEECCCEEEEEECCCCEEECCHHHEECCCCCCCHHHHHHHHHH EKYNGLLSRAAGNNGLWEVTVALKNYDEKAFSAVTETKVGNDTESILFAVQVNNTLSTAE HHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHH TREVISSYDLTLDWTEYVGEKSLNYFVDATNVKDIHNRFTKAEDGTNVTYQELAWKSDAA HHHHHHHCCCEEEHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCHHHHEECCCCC TTIIPLDKVNTNVKVDNGDDRQTQKLYPAVQGEAIKIALSTADDKVTAPVNIRGIYVVLD EEEEEECCCCCEEEECCCCCCHHHHHCCCCCCCEEEEEEECCCCCEECCEEEEEEEEEEE KANAVESAPSELNAWNSYTYSGLNTVVEGTSTEITINSTTAINDVIGFRVYAVNFDGTLV CCCCCCCCCHHHCCCCCEEECCCHHHCCCCCEEEEEECCCHHHHCEEEEEEEEECCCEEE DPDGKAFYVQLGNAATDWNATATTVTALNPTDKAVTDTQSDKVAVSLTKLTAPTAATWTT CCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCEEEC DKVNNVNPAFNAIFVDANNNVLYNTAAPNTFPADFSKVAKVYTVPTVDDWTKYEDNKTYN CCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCHHHHEEEEECCCCCCCCCCCCCCEEE GTLTIKNASGHVLATMKVSMTKVLPTTIPAGFSVKTAQVTDGIYNCYMIPMNDANDIAWT EEEEEECCCCCEEEEEEEEEHHHCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCEEEE AETATKGSMKMSEVFNYGTGAAANYNITFATSKKDGNKDVAVVVAGDKTLEVAKDYINNS ECCCCCCCEEHHHHHCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHCCC VKHTTTVVYNYGKISSVKNSEGGYDDVTREAERFETIYNCIYNSTYTWAWATREQLGAPY CCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCC TDKDSDGNYTTAMPSTKLTYGTDRLDFAADSFIFGTSAKDSRYSKLLSTPYESSLIITDA CCCCCCCCEEEECCCCEEEECCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCEEEEEEE TLTSDANGEEEYFDVIIDNNKHITGFKATALSSETNPTAAVPSTLTIKCKDMYGHDVIIK EECCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEE VAMTVNKR EEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA