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The map label for this gene is gadW [C]

Identifier: 150003855

GI number: 150003855

Start: 1735431

End: 1735658

Strand: Reverse

Name: gadW [C]

Synonym: BVU_1287

Alternate gene names: 150003855

Gene position: 1735658-1735431 (Counterclockwise)

Preceding gene: 150003856

Following gene: 150003854

Centisome position: 33.62

GC content: 47.37

Gene sequence:

>228_bases
GTGAACAACTACTTCGGATGCAATTTCAAGCGGTTAATAAATTCTTACAGGGTGGTTCGCGCGAAGGAGTTGCTGGACGG
TAAAGATTGCCCGGTGAATGAGCTTTTCAGCCGTTGCGGGTTCGCCTCCAAGAGCGTGTTCTATGTGGCGTTCAGAAAAG
TGGTTGGCATGACTCCCCTGCAATATATATCGCAGAGTCGGAATCCTTTTATGGTTCAACGCAATTAA

Upstream 100 bases:

>100_bases
GCCCTTGCATCATTAAAGTTGTCACACATATAACTGGTGTTCAAACAATTAGTATTACTGTATAGTATCCGGCACGAATA
CGACCTACCTGAGTAATGCG

Downstream 100 bases:

>100_bases
GTCCTTTTATAACAATAAACATTTTGAGTTTTTAAATTTATAAATTTAAAGTTTTTCTATTATGAACAAAAAATTTTTAA
GTGCAATCCTGTTCGGAGCC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MNNYFGCNFKRLINSYRVVRAKELLDGKDCPVNELFSRCGFASKSVFYVAFRKVVGMTPLQYISQSRNPFMVQRN

Sequences:

>Translated_75_residues
MNNYFGCNFKRLINSYRVVRAKELLDGKDCPVNELFSRCGFASKSVFYVAFRKVVGMTPLQYISQSRNPFMVQRN
>Mature_75_residues
MNNYFGCNFKRLINSYRVVRAKELLDGKDCPVNELFSRCGFASKSVFYVAFRKVVGMTPLQYISQSRNPFMVQRN

Specific function: Depending On The Conditions (Growth Phase And Medium), Acts As A Positive Or Negative Regulator Of Gada And Gadbc. Repression Occurs Directly Or Via The Repression Of The Expression Of Gadx. Activation Occurs Directly By The Binding Of Gadw To The Gada An

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8751; Mature: 8751

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNYFGCNFKRLINSYRVVRAKELLDGKDCPVNELFSRCGFASKSVFYVAFRKVVGMTPL
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHH
QYISQSRNPFMVQRN
HHHHCCCCCEEEECC
>Mature Secondary Structure
MNNYFGCNFKRLINSYRVVRAKELLDGKDCPVNELFSRCGFASKSVFYVAFRKVVGMTPL
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHH
QYISQSRNPFMVQRN
HHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA