| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150003836
Identifier: 150003836
GI number: 150003836
Start: 1706214
End: 1708670
Strand: Reverse
Name: 150003836
Synonym: BVU_1268
Alternate gene names: NA
Gene position: 1708670-1706214 (Counterclockwise)
Preceding gene: 150003837
Following gene: 150003835
Centisome position: 33.09
GC content: 46.07
Gene sequence:
>2457_bases ATGAAGAAACTTCAACTATGCATTTTAGGAAGCTTATTCGCAGCTTCCTTACAAGCACAGAGTACAGATTACACCAAAGG ACTGAGCATCTGGTTTGATACCCCTAATAATTTGGACGGACGCGCTTCCTGGTATTCTCCTGCAACAGACAAAGCATGGG AAAACAACTCACTCCCCATAGGAAACGGCAGTTTGGGAGGTAATGTTATGGGATCTATAGCGGCAGAACGAATCACTTTA AACGAAAAGACACTATGGCGCGGAGGGCCGAACACAGAAAAGGGAGCAGCTTATTATTGGAACGTAAATAAAGAGTCGGC ACACCTGTTATCCGAAATCCGCCAAGCATTCACAGACGGTAACCAGAAAAAAGCAGAAGAACTTACCTGCAAAAACTTCA ACGGACTGGCCGATTATGAGCCAAGCCGTGAAACACCTTTTCGCTTCGGCTCCTTTACTACATTGGGAGAAGCTTACATC GAAACCGGTTTAAGTGAAATCGGTATGACCGATTATAAACGCATCCTGTCTCTTGACTCGGCCATGGCAATAGTCAGTTT TCGCAAAGATGAAGTGAACTACGAGCGTAAATACTTCGTTTCCTACCCCGACAGCGTAATGGTACTGAAGTTCACAGCCG ACCGTCCCGGCATGCAAAACCTGATATTCAGCTATGGCAGCAACCCTGAAGCCATAGGTGATATCAAAACAGACGGTCCC AATCGTTTGCTCTATACCGGTCGCCTCAAAAACAACCAAATGAAATTTGCTCTCCGCATACAAGCCATAAACAAAGGAGG AAGCCTGAACACGACTGATGGCAAATTCATTGTCCGCAATGCGGATGAAGTCATTTTTCTGCTGACCGCAGATACCGATT ATAAACTCAACTTCAATCCAGACTTCAAAGACCCCAAGACGTATGTCGGTCCTGATCCGGACCAAACAACCCTGGCCATG CTAGACGCTGCCGCTGCCAAAAATTACAACGAATTATGCGAGCGACACAAAACGGACTATACCCAACTGTTTGGCAGAGT CAAACTACAACTGAACCCTCATGCTCCTATGACCTTGCAATATCCTGCCGTTACAGATCTTCCCACCCATCAACGTCTGG CACGCTATCGCAAAGGAAATCCGGACTACCGGCTGGAAGAAATCTATTATCAGTTCGGACGATACTTATTAATTGCCAGT TCACGCCCCGGCAATCTCCCGGCCAACCTGCAAGGAATGTGGGCCAACGGGGTAGATGGCCCATGGCATGTAGATTACCA TAATAATATCAATATCCAGATGAACTACTGGCCTGCTTGCTCCACCAATCTGAACGAATGTGTATGGCCTTTGATAGACT TCATCCGTACCTTGGTAAAACCGGGAGAAAAAACAGCCCAAGCCTATTTCGGCGCACGCGGATGGACAGCCTCCATATCC GGAAACATTTTCGGATTTACCTCCCCTTTGACCGATGAAAATATGTCCTGGAACTTTAACCCGATGGCAGGTCCCTGGCT GGCAACTCACATTTGGGAATACTATGATTACACCCGAGACAAAAAATTCCTGAAAGAAGTAGGCTATGATCTTATCAAGA GCAGTGCCAACTTTGCTGTAGACTATTTATGGCATAAACCGGACGGGACCTACACTGCTGCTCCTTCAACTTCTCCCGAG CATGGACCTGTAGACCAAGGAGCTACTTTTGTACACGCTGTAGTCCGCGAAATATTGCTCAACGCCATTGATGCCAGCAA AGCACTGGGTGTCGATTCCAAAGACCGTAAACAATGGCAATATGTACTGAAACATCTTGTACCCTATCAAATAGGACGTT ATGGTCAGTTAATGGAATGGTCAACAGACATAGACGATCCCAAAGACGAGCATCGTCACGTCAACCATTTATTCGGACTG CATCCGGGCCACACCCTTTCACCAATTACTACTCCCGAATTAACCAATGCCGCCAAAGTTGTTTTAGAACACCGCGGTGA CGGAGCTACCGGCTGGAGCATGGGATGGAAACTGAATCAATGGGCACGTCTGCAAGACGGCAACCACGCCTACAAACTAT TTGGCAACTTACTAAAAAATGGAACTTTGGACAACTTATGGGATACCCATCCGCCTTTCCAGATTGACGGTAACTTTGGC GGAACTGCCGGTATCACAGAAATGTTGTTGCAAAGTCACATGGGATTCATCCAATTACTCCCAGCCTTGCCAGACGCATG GAAAGAAGGTTCTGTCAAAGGGCTTTGTGCCAAAGGTAACTTTGAAATTGACATTATCTGGCAGGATGGGAAATTAAAAG AAGCCGTCATTCTGTCCAAAGCCGGTGAGCCCTGCAATCTGAGATATGGTAACCTGACTTTTACCTTTAAGACAACTAAA GGAAAGACATATAAAGTAATGGTTGAGAATGAAAAACTGAAAAAAATCCCCTTATAA
Upstream 100 bases:
>100_bases AAAAACAGGAAATCACCCTAAATTTCAAACATTACATTTCTCACAAATAAAAATCTAATTGTATTTTTGTAAAAATACCT TTAACTAATATCATTAATTT
Downstream 100 bases:
>100_bases GAACAAAAAACAGTCAGACAAATCCCCCCTCATTTTTCAATCTATTTTGTCATTCTGAACACTATGTTATCTTTTACATC TGTTCAGAATGACAAATTAT
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Large Secreted Protein; Fibronectin Type III Domain Protein; Twin-Arginine Translocation Pathway Signal; Alpha/Beta Hydrolase Domain-Containing Protein; Alpha-Fucosidase; Glycoside Hydrolase Family Protein; Six-Hairpin Glycosidase; 1 2-Alpha-L-Fucosidase; Ricin B Lectin; Coagulation Factor 5/8 Type Domain-Containing Protein; Trehalose And Maltose Hydrolase-Like Protein; Glycosyl Hydrolase; F5/8 Type C Domain-Containing Protein; Candidate Alpha-L-Fucosidase; Fibronectin Type III Domain-Containing Protein; Glycosyl Hydrolase Family Protein; 1 2-A-L-Fucosidase
Number of amino acids: Translated: 818; Mature: 818
Protein sequence:
>818_residues MKKLQLCILGSLFAASLQAQSTDYTKGLSIWFDTPNNLDGRASWYSPATDKAWENNSLPIGNGSLGGNVMGSIAAERITL NEKTLWRGGPNTEKGAAYYWNVNKESAHLLSEIRQAFTDGNQKKAEELTCKNFNGLADYEPSRETPFRFGSFTTLGEAYI ETGLSEIGMTDYKRILSLDSAMAIVSFRKDEVNYERKYFVSYPDSVMVLKFTADRPGMQNLIFSYGSNPEAIGDIKTDGP NRLLYTGRLKNNQMKFALRIQAINKGGSLNTTDGKFIVRNADEVIFLLTADTDYKLNFNPDFKDPKTYVGPDPDQTTLAM LDAAAAKNYNELCERHKTDYTQLFGRVKLQLNPHAPMTLQYPAVTDLPTHQRLARYRKGNPDYRLEEIYYQFGRYLLIAS SRPGNLPANLQGMWANGVDGPWHVDYHNNINIQMNYWPACSTNLNECVWPLIDFIRTLVKPGEKTAQAYFGARGWTASIS GNIFGFTSPLTDENMSWNFNPMAGPWLATHIWEYYDYTRDKKFLKEVGYDLIKSSANFAVDYLWHKPDGTYTAAPSTSPE HGPVDQGATFVHAVVREILLNAIDASKALGVDSKDRKQWQYVLKHLVPYQIGRYGQLMEWSTDIDDPKDEHRHVNHLFGL HPGHTLSPITTPELTNAAKVVLEHRGDGATGWSMGWKLNQWARLQDGNHAYKLFGNLLKNGTLDNLWDTHPPFQIDGNFG GTAGITEMLLQSHMGFIQLLPALPDAWKEGSVKGLCAKGNFEIDIIWQDGKLKEAVILSKAGEPCNLRYGNLTFTFKTTK GKTYKVMVENEKLKKIPL
Sequences:
>Translated_818_residues MKKLQLCILGSLFAASLQAQSTDYTKGLSIWFDTPNNLDGRASWYSPATDKAWENNSLPIGNGSLGGNVMGSIAAERITL NEKTLWRGGPNTEKGAAYYWNVNKESAHLLSEIRQAFTDGNQKKAEELTCKNFNGLADYEPSRETPFRFGSFTTLGEAYI ETGLSEIGMTDYKRILSLDSAMAIVSFRKDEVNYERKYFVSYPDSVMVLKFTADRPGMQNLIFSYGSNPEAIGDIKTDGP NRLLYTGRLKNNQMKFALRIQAINKGGSLNTTDGKFIVRNADEVIFLLTADTDYKLNFNPDFKDPKTYVGPDPDQTTLAM LDAAAAKNYNELCERHKTDYTQLFGRVKLQLNPHAPMTLQYPAVTDLPTHQRLARYRKGNPDYRLEEIYYQFGRYLLIAS SRPGNLPANLQGMWANGVDGPWHVDYHNNINIQMNYWPACSTNLNECVWPLIDFIRTLVKPGEKTAQAYFGARGWTASIS GNIFGFTSPLTDENMSWNFNPMAGPWLATHIWEYYDYTRDKKFLKEVGYDLIKSSANFAVDYLWHKPDGTYTAAPSTSPE HGPVDQGATFVHAVVREILLNAIDASKALGVDSKDRKQWQYVLKHLVPYQIGRYGQLMEWSTDIDDPKDEHRHVNHLFGL HPGHTLSPITTPELTNAAKVVLEHRGDGATGWSMGWKLNQWARLQDGNHAYKLFGNLLKNGTLDNLWDTHPPFQIDGNFG GTAGITEMLLQSHMGFIQLLPALPDAWKEGSVKGLCAKGNFEIDIIWQDGKLKEAVILSKAGEPCNLRYGNLTFTFKTTK GKTYKVMVENEKLKKIPL >Mature_818_residues MKKLQLCILGSLFAASLQAQSTDYTKGLSIWFDTPNNLDGRASWYSPATDKAWENNSLPIGNGSLGGNVMGSIAAERITL NEKTLWRGGPNTEKGAAYYWNVNKESAHLLSEIRQAFTDGNQKKAEELTCKNFNGLADYEPSRETPFRFGSFTTLGEAYI ETGLSEIGMTDYKRILSLDSAMAIVSFRKDEVNYERKYFVSYPDSVMVLKFTADRPGMQNLIFSYGSNPEAIGDIKTDGP NRLLYTGRLKNNQMKFALRIQAINKGGSLNTTDGKFIVRNADEVIFLLTADTDYKLNFNPDFKDPKTYVGPDPDQTTLAM LDAAAAKNYNELCERHKTDYTQLFGRVKLQLNPHAPMTLQYPAVTDLPTHQRLARYRKGNPDYRLEEIYYQFGRYLLIAS SRPGNLPANLQGMWANGVDGPWHVDYHNNINIQMNYWPACSTNLNECVWPLIDFIRTLVKPGEKTAQAYFGARGWTASIS GNIFGFTSPLTDENMSWNFNPMAGPWLATHIWEYYDYTRDKKFLKEVGYDLIKSSANFAVDYLWHKPDGTYTAAPSTSPE HGPVDQGATFVHAVVREILLNAIDASKALGVDSKDRKQWQYVLKHLVPYQIGRYGQLMEWSTDIDDPKDEHRHVNHLFGL HPGHTLSPITTPELTNAAKVVLEHRGDGATGWSMGWKLNQWARLQDGNHAYKLFGNLLKNGTLDNLWDTHPPFQIDGNFG GTAGITEMLLQSHMGFIQLLPALPDAWKEGSVKGLCAKGNFEIDIIWQDGKLKEAVILSKAGEPCNLRYGNLTFTFKTTK GKTYKVMVENEKLKKIPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92115; Mature: 92115
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLQLCILGSLFAASLQAQSTDYTKGLSIWFDTPNNLDGRASWYSPATDKAWENNSLPI CCCEEEEHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC GNGSLGGNVMGSIAAERITLNEKTLWRGGPNTEKGAAYYWNVNKESAHLLSEIRQAFTDG CCCCCCCCHHHHHHHHEEEECCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCC NQKKAEELTCKNFNGLADYEPSRETPFRFGSFTTLGEAYIETGLSEIGMTDYKRILSLDS CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHCCHHHHHHHHHHHH AMAIVSFRKDEVNYERKYFVSYPDSVMVLKFTADRPGMQNLIFSYGSNPEAIGDIKTDGP HHHEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCC NRLLYTGRLKNNQMKFALRIQAINKGGSLNTTDGKFIVRNADEVIFLLTADTDYKLNFNP CEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEEECCCCEEEECCC DFKDPKTYVGPDPDQTTLAMLDAAAAKNYNELCERHKTDYTQLFGRVKLQLNPHAPMTLQ CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHCEEEEEEECCCCCEEEE YPAVTDLPTHQRLARYRKGNPDYRLEEIYYQFGRYLLIASSRPGNLPANLQGMWANGVDG CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCCCC PWHVDYHNNINIQMNYWPACSTNLNECVWPLIDFIRTLVKPGEKTAQAYFGARGWTASIS CEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEC GNIFGFTSPLTDENMSWNFNPMAGPWLATHIWEYYDYTRDKKFLKEVGYDLIKSSANFAV CCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEE DYLWHKPDGTYTAAPSTSPEHGPVDQGATFVHAVVREILLNAIDASKALGVDSKDRKQWQ EEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH YVLKHLVPYQIGRYGQLMEWSTDIDDPKDEHRHVNHLFGLHPGHTLSPITTPELTNAAKV HHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH VLEHRGDGATGWSMGWKLNQWARLQDGNHAYKLFGNLLKNGTLDNLWDTHPPFQIDGNFG HEEECCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCC GTAGITEMLLQSHMGFIQLLPALPDAWKEGSVKGLCAKGNFEIDIIWQDGKLKEAVILSK CHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCEEEEEEC AGEPCNLRYGNLTFTFKTTKGKTYKVMVENEKLKKIPL CCCCCCEEECCEEEEEEECCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MKKLQLCILGSLFAASLQAQSTDYTKGLSIWFDTPNNLDGRASWYSPATDKAWENNSLPI CCCEEEEHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC GNGSLGGNVMGSIAAERITLNEKTLWRGGPNTEKGAAYYWNVNKESAHLLSEIRQAFTDG CCCCCCCCHHHHHHHHEEEECCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCC NQKKAEELTCKNFNGLADYEPSRETPFRFGSFTTLGEAYIETGLSEIGMTDYKRILSLDS CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHCCHHHHHHHHHHHH AMAIVSFRKDEVNYERKYFVSYPDSVMVLKFTADRPGMQNLIFSYGSNPEAIGDIKTDGP HHHEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCC NRLLYTGRLKNNQMKFALRIQAINKGGSLNTTDGKFIVRNADEVIFLLTADTDYKLNFNP CEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEEECCCCEEEECCC DFKDPKTYVGPDPDQTTLAMLDAAAAKNYNELCERHKTDYTQLFGRVKLQLNPHAPMTLQ CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHCEEEEEEECCCCCEEEE YPAVTDLPTHQRLARYRKGNPDYRLEEIYYQFGRYLLIASSRPGNLPANLQGMWANGVDG CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCCCC PWHVDYHNNINIQMNYWPACSTNLNECVWPLIDFIRTLVKPGEKTAQAYFGARGWTASIS CEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEC GNIFGFTSPLTDENMSWNFNPMAGPWLATHIWEYYDYTRDKKFLKEVGYDLIKSSANFAV CCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEE DYLWHKPDGTYTAAPSTSPEHGPVDQGATFVHAVVREILLNAIDASKALGVDSKDRKQWQ EEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH YVLKHLVPYQIGRYGQLMEWSTDIDDPKDEHRHVNHLFGLHPGHTLSPITTPELTNAAKV HHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH VLEHRGDGATGWSMGWKLNQWARLQDGNHAYKLFGNLLKNGTLDNLWDTHPPFQIDGNFG HEEECCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCC GTAGITEMLLQSHMGFIQLLPALPDAWKEGSVKGLCAKGNFEIDIIWQDGKLKEAVILSK CHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCEEEEEEC AGEPCNLRYGNLTFTFKTTKGKTYKVMVENEKLKKIPL CCCCCCEEECCEEEEEEECCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA