Click here to switch to the map view.

The map label for this gene is yidD [C]

Identifier: 150003758

GI number: 150003758

Start: 1603497

End: 1603718

Strand: Direct

Name: yidD [C]

Synonym: BVU_1189

Alternate gene names: 150003758

Gene position: 1603497-1603718 (Clockwise)

Preceding gene: 150003757

Following gene: 150003759

Centisome position: 31.06

GC content: 47.3

Gene sequence:

>222_bases
ATGAAAAAGATACTTTCCTATCTGTTGCTGTTGCCTGTTTATTTCTATCGGGGGTACATTTCTCCAATGACTCCTCCTTC
ATGCCGTTTTGTACCTACCTGTTCGGAATATGCCATCGAGGCTATTAAAAAACATGGTCCTTTCAAGGGATTGTATCTGG
CTGTCCGCCGGATATTGCGTTGCCATCCGTGGGGCGGGTCGGGCTATGATCCGGTTCCGTAA

Upstream 100 bases:

>100_bases
TGATTATCGCCTTTATATGGCTGGATAACCATATTCATTCTTCTGCCGAAGTGGAGGAGAAAGTGAAGAAGCTGCTGTTT
CATATAGTGGAAAGGCTGGA

Downstream 100 bases:

>100_bases
AATCTGTTGTCCTTATGTTGCTGGATATTCATACGCATCGCAATGCTGCTGTACCGGGAGAATGCATTTTCAATGTAGAG
CCTGCATGGTTTGAACCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MKKILSYLLLLPVYFYRGYISPMTPPSCRFVPTCSEYAIEAIKKHGPFKGLYLAVRRILRCHPWGGSGYDPVP

Sequences:

>Translated_73_residues
MKKILSYLLLLPVYFYRGYISPMTPPSCRFVPTCSEYAIEAIKKHGPFKGLYLAVRRILRCHPWGGSGYDPVP
>Mature_73_residues
MKKILSYLLLLPVYFYRGYISPMTPPSCRFVPTCSEYAIEAIKKHGPFKGLYLAVRRILRCHPWGGSGYDPVP

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=68, Percent_Identity=48.5294117647059, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1189_BACV8 (A6KZL6)

Other databases:

- EMBL:   CP000139
- RefSeq:   YP_001298502.1
- STRING:   A6KZL6
- GeneID:   5302155
- GenomeReviews:   CP000139_GR
- KEGG:   bvu:BVU_1189
- eggNOG:   COG0759
- HOGENOM:   HBG634291
- OMA:   CSEYAIE
- ProtClustDB:   PRK00041
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 8364; Mature: 8364

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILSYLLLLPVYFYRGYISPMTPPSCRFVPTCSEYAIEAIKKHGPFKGLYLAVRRILR
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
CHPWGGSGYDPVP
CCCCCCCCCCCCC
>Mature Secondary Structure
MKKILSYLLLLPVYFYRGYISPMTPPSCRFVPTCSEYAIEAIKKHGPFKGLYLAVRRILR
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
CHPWGGSGYDPVP
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA