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The map label for this gene is kduI1 [H]

Identifier: 150003676

GI number: 150003676

Start: 1474262

End: 1475104

Strand: Reverse

Name: kduI1 [H]

Synonym: BVU_1107

Alternate gene names: 150003676

Gene position: 1475104-1474262 (Counterclockwise)

Preceding gene: 150003677

Following gene: 150003675

Centisome position: 28.57

GC content: 47.81

Gene sequence:

>843_bases
ATGAAGACAAATTATGAAATCCGTTATGCCGCGCATCCCGAAGATGCCAAAGGCTATGACACCCAAAGGATACGACGGGA
TTTCTTAATGGAAAAAGTATTTTCGGACAATGAGGTGAACATGGTTTATTCCATGTATGACCGCATGATTGTAGGAGGAG
CCAGACCCGTAGGGGAGGTATTGAAGCTGGAGGCTATCGATCCGTTGAAAGCGCCTTATTTCCTTACCCGCCGTGAAATG
GGGATCTTCAATGTGGGCGGTCCCGGTGTGGTCAAAGCCGGAGATGCCGTGTTCGAACTGGATTATAAAGAAGCGCTTTA
TCTGGGTTCGGGAGACCGGGAAGTGACTTTTGAAAGTAAAGATGTCAAGAACCCTGCCAAATTCTATTTTAACTCTGTTA
CCGCTCATCGTAACTATCCCGATAAAAAAGTGACCAAGGCAGATGCCATCGTTGCTGAAATGGGTTCATTGGAAGGGTCC
AACCATCGTTGCATCAACAAGATGCTGGTCAGTCAGGTATTGCCTACCTGCCAGTTGCAGATGGGAATGACCGAACTGAA
ACCGGGAAGTGTGTGGAACACCATGCCGGCGCACGTGCACAGCCGCCGTATGGAAGCCTACTTCTATTTCGAAGTGCCCG
ATGAACACGCTGTTTGCCATTTTATGGGAGAAGTGGATGAAACCCGTCATATATGGATGAAAGGCGATCAGGCAGTCTTG
TCTCCCGAATGGTCTATCCATAGTGCGGCGGCAACACACAACTATACCTTTATCTGGGGTATGGGTGGAGAGAATCTGGA
TTACGGTGATCAGGACTTCTCATTGATTACAGACTTGAAATAA

Upstream 100 bases:

>100_bases
CTATTCTGAACGATTTTTGCAGCATCGGAACAAGATTGTTTCGTAACTTTGCCCAAGTCGAAATAATTCGGAATACTATA
AAAACATAAAATAGCTGCTT

Downstream 100 bases:

>100_bases
ATCATATAACTTCATTAATTTAATAATATAAGTATCATGAATCAGTATTTGAATTTTTCTTTGGAAGGTAAAGTAGCTCT
TGTAACAGGCGCTTCTTATG

Product: 5-keto-4-deoxyuronate isomerase

Products: NA

Alternate protein names: 5-keto-4-deoxyuronate isomerase 1; DKI isomerase 1 [H]

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKTNYEIRYAAHPEDAKGYDTQRIRRDFLMEKVFSDNEVNMVYSMYDRMIVGGARPVGEVLKLEAIDPLKAPYFLTRREM
GIFNVGGPGVVKAGDAVFELDYKEALYLGSGDREVTFESKDVKNPAKFYFNSVTAHRNYPDKKVTKADAIVAEMGSLEGS
NHRCINKMLVSQVLPTCQLQMGMTELKPGSVWNTMPAHVHSRRMEAYFYFEVPDEHAVCHFMGEVDETRHIWMKGDQAVL
SPEWSIHSAAATHNYTFIWGMGGENLDYGDQDFSLITDLK

Sequences:

>Translated_280_residues
MKTNYEIRYAAHPEDAKGYDTQRIRRDFLMEKVFSDNEVNMVYSMYDRMIVGGARPVGEVLKLEAIDPLKAPYFLTRREM
GIFNVGGPGVVKAGDAVFELDYKEALYLGSGDREVTFESKDVKNPAKFYFNSVTAHRNYPDKKVTKADAIVAEMGSLEGS
NHRCINKMLVSQVLPTCQLQMGMTELKPGSVWNTMPAHVHSRRMEAYFYFEVPDEHAVCHFMGEVDETRHIWMKGDQAVL
SPEWSIHSAAATHNYTFIWGMGGENLDYGDQDFSLITDLK
>Mature_280_residues
MKTNYEIRYAAHPEDAKGYDTQRIRRDFLMEKVFSDNEVNMVYSMYDRMIVGGARPVGEVLKLEAIDPLKAPYFLTRREM
GIFNVGGPGVVKAGDAVFELDYKEALYLGSGDREVTFESKDVKNPAKFYFNSVTAHRNYPDKKVTKADAIVAEMGSLEGS
NHRCINKMLVSQVLPTCQLQMGMTELKPGSVWNTMPAHVHSRRMEAYFYFEVPDEHAVCHFMGEVDETRHIWMKGDQAVL
SPEWSIHSAAATHNYTFIWGMGGENLDYGDQDFSLITDLK

Specific function: Pectin degradation. [C]

COG id: COG3717

COG function: function code G; 5-keto 4-deoxyuronate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kduI family [H]

Homologues:

Organism=Escherichia coli, GI1789209, Length=277, Percent_Identity=49.0974729241877, Blast_Score=283, Evalue=1e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR007045
- InterPro:   IPR021120 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: =5.3.1.17 [H]

Molecular weight: Translated: 31850; Mature: 31850

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNYEIRYAAHPEDAKGYDTQRIRRDFLMEKVFSDNEVNMVYSMYDRMIVGGARPVGEV
CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHH
LKLEAIDPLKAPYFLTRREMGIFNVGGPGVVKAGDAVFELDYKEALYLGSGDREVTFESK
HEEECCCCCCCCEEEEECCCCEEECCCCCEEECCCEEEEECCHHEEEECCCCCEEEECCC
DVKNPAKFYFNSVTAHRNYPDKKVTKADAIVAEMGSLEGSNHRCINKMLVSQVLPTCQLQ
CCCCHHHHHHHHECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHEEC
MGMTELKPGSVWNTMPAHVHSRRMEAYFYFEVPDEHAVCHFMGEVDETRHIWMKGDQAVL
CCCHHCCCCCCCCCCCHHHHHCCEEEEEEEECCCCCCCHHHHCCCCCCEEEEEECCEEEE
SPEWSIHSAAATHNYTFIWGMGGENLDYGDQDFSLITDLK
CCCCCCCCCEECCCEEEEEECCCCCCCCCCCCCEEEECCC
>Mature Secondary Structure
MKTNYEIRYAAHPEDAKGYDTQRIRRDFLMEKVFSDNEVNMVYSMYDRMIVGGARPVGEV
CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHH
LKLEAIDPLKAPYFLTRREMGIFNVGGPGVVKAGDAVFELDYKEALYLGSGDREVTFESK
HEEECCCCCCCCEEEEECCCCEEECCCCCEEECCCEEEEECCHHEEEECCCCCEEEECCC
DVKNPAKFYFNSVTAHRNYPDKKVTKADAIVAEMGSLEGSNHRCINKMLVSQVLPTCQLQ
CCCCHHHHHHHHECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHEEC
MGMTELKPGSVWNTMPAHVHSRRMEAYFYFEVPDEHAVCHFMGEVDETRHIWMKGDQAVL
CCCHHCCCCCCCCCCCHHHHHCCEEEEEEEECCCCCCCHHHHCCCCCCEEEEEECCEEEE
SPEWSIHSAAATHNYTFIWGMGGENLDYGDQDFSLITDLK
CCCCCCCCCEECCCEEEEEECCCCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12663928 [H]