| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is idnO [H]
Identifier: 150003675
GI number: 150003675
Start: 1473422
End: 1474225
Strand: Reverse
Name: idnO [H]
Synonym: BVU_1106
Alternate gene names: 150003675
Gene position: 1474225-1473422 (Counterclockwise)
Preceding gene: 150003676
Following gene: 150003674
Centisome position: 28.55
GC content: 45.77
Gene sequence:
>804_bases ATGAATCAGTATTTGAATTTTTCTTTGGAAGGTAAAGTAGCTCTTGTAACAGGCGCTTCTTATGGTATCGGTTTTGCTAT TGCATCTGCTTTTGCAGAACAGGGCGCAACCATCTGTTTCAACGACATCAATCAGGAATTGGTGGATAAAGGTCTGGCTT CTTACGCTGAAAAAGGAATCAAGGCACACGGATATGTATGCGATGTTACTGACGAACCTGCCGTACAGGCTATGGTTGCC ACTATTGCCAAAAAAGTAGGTACCATCGATATTCTTGTAAACAATGCCGGTATTATCCGTCGCGTTCCGATGCACGAGAT GGAAGCTGCCGATTTCCGCCGTGTTATTGATATTGATTTGAATGCTCCGTTCATTGTTTCTAAAGCGGTTTTGCCTGCGA TGATGGAAAAAGGACACGGAAAAATCATCAATATCTGCTCTATGATGTCTGAGTTGGGTCGTGAAACCGTTTCTGCATAC GCTGCCGCTAAAGGTGGTTTGAAGATGTTGACCCGTAACATCTGTTCTGAATACGGAGAATACAACATTCAGTGTAATGG TATCGGTCCGGGCTATATCGCTACTCCGCAAACAGCTCCGTTACGTGAAATCCAGCCCGATGGAAGCCGTCATCCGTTTG ATACATTCATCTGTGCCAAGACTCCGGCCGGCCGTTGGTTGGATCCGCAGGAATTGACCGGTCCTGCCGTATTCCTTGCA TCCGAAGCATCTAATGCCGTCAATGGCCATATTCTCTATGTAGATGGCGGTATTCTGGCCTACATTGGTAAGCAGCCTAA ATAA
Upstream 100 bases:
>100_bases TATGGGTGGAGAGAATCTGGATTACGGTGATCAGGACTTCTCATTGATTACAGACTTGAAATAAATCATATAACTTCATT AATTTAATAATATAAGTATC
Downstream 100 bases:
>100_bases TTAGTAGATATAAATAGAAAGAATCTGCTTGTGTCTTTGTTGATACTTGCAGATTCTTTGTATTTTTGTCTTTCAGTTCG ACAAACAATAAATAGTATGA
Product: gluconate 5-dehydrogenase
Products: NA
Alternate protein names: 5-keto-D-gluconate 5-reductase [H]
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MNQYLNFSLEGKVALVTGASYGIGFAIASAFAEQGATICFNDINQELVDKGLASYAEKGIKAHGYVCDVTDEPAVQAMVA TIAKKVGTIDILVNNAGIIRRVPMHEMEAADFRRVIDIDLNAPFIVSKAVLPAMMEKGHGKIINICSMMSELGRETVSAY AAAKGGLKMLTRNICSEYGEYNIQCNGIGPGYIATPQTAPLREIQPDGSRHPFDTFICAKTPAGRWLDPQELTGPAVFLA SEASNAVNGHILYVDGGILAYIGKQPK
Sequences:
>Translated_267_residues MNQYLNFSLEGKVALVTGASYGIGFAIASAFAEQGATICFNDINQELVDKGLASYAEKGIKAHGYVCDVTDEPAVQAMVA TIAKKVGTIDILVNNAGIIRRVPMHEMEAADFRRVIDIDLNAPFIVSKAVLPAMMEKGHGKIINICSMMSELGRETVSAY AAAKGGLKMLTRNICSEYGEYNIQCNGIGPGYIATPQTAPLREIQPDGSRHPFDTFICAKTPAGRWLDPQELTGPAVFLA SEASNAVNGHILYVDGGILAYIGKQPK >Mature_267_residues MNQYLNFSLEGKVALVTGASYGIGFAIASAFAEQGATICFNDINQELVDKGLASYAEKGIKAHGYVCDVTDEPAVQAMVA TIAKKVGTIDILVNNAGIIRRVPMHEMEAADFRRVIDIDLNAPFIVSKAVLPAMMEKGHGKIINICSMMSELGRETVSAY AAAKGGLKMLTRNICSEYGEYNIQCNGIGPGYIATPQTAPLREIQPDGSRHPFDTFICAKTPAGRWLDPQELTGPAVFLA SEASNAVNGHILYVDGGILAYIGKQPK
Specific function: Catalyzes a reversible reduction of 5-ketoglutanate to form D-gluconate. Dependent on NADP, almost inactive with NAD [H]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=250, Percent_Identity=30.8, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI15277342, Length=268, Percent_Identity=29.4776119402985, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI40254992, Length=247, Percent_Identity=29.5546558704453, Blast_Score=101, Evalue=8e-22, Organism=Homo sapiens, GI10190704, Length=254, Percent_Identity=31.8897637795276, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI59889578, Length=235, Percent_Identity=30.6382978723404, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI20149619, Length=209, Percent_Identity=33.0143540669856, Blast_Score=98, Evalue=6e-21, Organism=Homo sapiens, GI210032110, Length=191, Percent_Identity=27.7486910994764, Blast_Score=98, Evalue=7e-21, Organism=Homo sapiens, GI66933014, Length=250, Percent_Identity=30, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI142976729, Length=208, Percent_Identity=25.4807692307692, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI4503301, Length=203, Percent_Identity=28.0788177339901, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI126723750, Length=254, Percent_Identity=29.5275590551181, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI4504505, Length=193, Percent_Identity=32.1243523316062, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=31.8681318681319, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI19923817, Length=259, Percent_Identity=28.1853281853282, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI7705925, Length=259, Percent_Identity=28.957528957529, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI4758504, Length=272, Percent_Identity=29.7794117647059, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI40807363, Length=155, Percent_Identity=30.9677419354839, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI5031737, Length=249, Percent_Identity=26.9076305220884, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI33667109, Length=188, Percent_Identity=29.2553191489362, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI25282469, Length=187, Percent_Identity=29.4117647058824, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI83715985, Length=272, Percent_Identity=28.6764705882353, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI109715829, Length=220, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI4503817, Length=214, Percent_Identity=29.9065420560748, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI157739938, Length=198, Percent_Identity=24.2424242424242, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI7706318, Length=190, Percent_Identity=26.8421052631579, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI310128830, Length=144, Percent_Identity=30.5555555555556, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI310115468, Length=144, Percent_Identity=30.5555555555556, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI226371731, Length=195, Percent_Identity=28.2051282051282, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI31542939, Length=253, Percent_Identity=26.0869565217391, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1790717, Length=256, Percent_Identity=47.65625, Blast_Score=239, Evalue=2e-64, Organism=Escherichia coli, GI87082160, Length=259, Percent_Identity=42.4710424710425, Blast_Score=182, Evalue=2e-47, Organism=Escherichia coli, GI1789208, Length=255, Percent_Identity=38.4313725490196, Blast_Score=157, Evalue=7e-40, Organism=Escherichia coli, GI1787335, Length=254, Percent_Identity=37.007874015748, Blast_Score=153, Evalue=1e-38, Organism=Escherichia coli, GI1787905, Length=252, Percent_Identity=36.5079365079365, Blast_Score=135, Evalue=2e-33, Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=35.4581673306773, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1788459, Length=251, Percent_Identity=29.8804780876494, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI1786812, Length=256, Percent_Identity=26.5625, Blast_Score=88, Evalue=4e-19, Organism=Escherichia coli, GI1787820, Length=211, Percent_Identity=28.436018957346, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1789057, Length=259, Percent_Identity=26.6409266409266, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI2367175, Length=252, Percent_Identity=29.3650793650794, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI2367365, Length=253, Percent_Identity=30.4347826086957, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789378, Length=252, Percent_Identity=28.1746031746032, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787526, Length=193, Percent_Identity=30.0518134715026, Blast_Score=73, Evalue=2e-14, Organism=Caenorhabditis elegans, GI25147288, Length=252, Percent_Identity=30.952380952381, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17561402, Length=257, Percent_Identity=30.7392996108949, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17544670, Length=263, Percent_Identity=30.7984790874525, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17555706, Length=264, Percent_Identity=28.7878787878788, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17560676, Length=255, Percent_Identity=25.0980392156863, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17559104, Length=259, Percent_Identity=28.957528957529, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI193203115, Length=197, Percent_Identity=27.9187817258883, Blast_Score=91, Evalue=9e-19, Organism=Caenorhabditis elegans, GI193203117, Length=191, Percent_Identity=27.7486910994764, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17564282, Length=159, Percent_Identity=32.0754716981132, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17565030, Length=266, Percent_Identity=27.8195488721804, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17536025, Length=257, Percent_Identity=29.5719844357977, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17568967, Length=195, Percent_Identity=29.2307692307692, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17562904, Length=271, Percent_Identity=25.830258302583, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17560150, Length=274, Percent_Identity=27.007299270073, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17508895, Length=190, Percent_Identity=27.8947368421053, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17538480, Length=268, Percent_Identity=25, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17560332, Length=265, Percent_Identity=26.4150943396226, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17567345, Length=220, Percent_Identity=23.6363636363636, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17561272, Length=261, Percent_Identity=29.8850574712644, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17562990, Length=267, Percent_Identity=25.8426966292135, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17562906, Length=270, Percent_Identity=25.1851851851852, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17560220, Length=268, Percent_Identity=28.7313432835821, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI115534694, Length=253, Percent_Identity=26.0869565217391, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17562908, Length=268, Percent_Identity=26.1194029850746, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17551412, Length=263, Percent_Identity=25.4752851711027, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI193204405, Length=269, Percent_Identity=27.5092936802974, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17536651, Length=257, Percent_Identity=27.6264591439689, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=25.3012048192771, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17562910, Length=265, Percent_Identity=25.6603773584906, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=25, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17563726, Length=258, Percent_Identity=26.7441860465116, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=26.0377358490566, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17538182, Length=229, Percent_Identity=30.1310043668122, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71982365, Length=189, Percent_Identity=31.2169312169312, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17558006, Length=209, Percent_Identity=25.3588516746411, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=193, Percent_Identity=33.6787564766839, Blast_Score=100, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6324126, Length=255, Percent_Identity=27.843137254902, Blast_Score=70, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6323882, Length=197, Percent_Identity=28.9340101522843, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6320089, Length=191, Percent_Identity=25.6544502617801, Blast_Score=63, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6322227, Length=201, Percent_Identity=27.8606965174129, Blast_Score=63, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6322226, Length=195, Percent_Identity=26.1538461538462, Blast_Score=62, Evalue=8e-11, Organism=Drosophila melanogaster, GI24639444, Length=253, Percent_Identity=33.201581027668, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI21355319, Length=255, Percent_Identity=27.843137254902, Blast_Score=107, Evalue=7e-24, Organism=Drosophila melanogaster, GI23397609, Length=254, Percent_Identity=31.1023622047244, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI24643142, Length=250, Percent_Identity=31.2, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24640492, Length=192, Percent_Identity=29.6875, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24644339, Length=254, Percent_Identity=30.3149606299213, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI24581726, Length=256, Percent_Identity=29.296875, Blast_Score=91, Evalue=5e-19, Organism=Drosophila melanogaster, GI21357041, Length=260, Percent_Identity=30, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI281364892, Length=176, Percent_Identity=31.8181818181818, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI28571526, Length=260, Percent_Identity=29.6153846153846, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI18859837, Length=187, Percent_Identity=33.6898395721925, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI17737361, Length=268, Percent_Identity=29.1044776119403, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI21357673, Length=192, Percent_Identity=32.8125, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24644337, Length=259, Percent_Identity=30.1158301158301, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24649181, Length=192, Percent_Identity=26.5625, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24648693, Length=205, Percent_Identity=31.219512195122, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI21355889, Length=205, Percent_Identity=31.219512195122, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI21358495, Length=197, Percent_Identity=27.4111675126904, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI221510726, Length=195, Percent_Identity=28.7179487179487, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI28571387, Length=212, Percent_Identity=26.4150943396226, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI21355631, Length=174, Percent_Identity=26.4367816091954, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24641232, Length=224, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24641388, Length=206, Percent_Identity=28.1553398058252, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.69 [H]
Molecular weight: Translated: 28588; Mature: 28588
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQYLNFSLEGKVALVTGASYGIGFAIASAFAEQGATICFNDINQELVDKGLASYAEKGI CCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCEEEEHHCCHHHHHHHHHHHHHCCC KAHGYVCDVTDEPAVQAMVATIAKKVGTIDILVNNAGIIRRVPMHEMEAADFRRVIDIDL CCCCEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCEEEECCHHHHHHHHCCEEEEEEC NAPFIVSKAVLPAMMEKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTRNICSEYGE CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC YNIQCNGIGPGYIATPQTAPLREIQPDGSRHPFDTFICAKTPAGRWLDPQELTGPAVFLA EEEEECCCCCCCEECCCCCCCHHCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCEEEEE SEASNAVNGHILYVDGGILAYIGKQPK CCCCCCCCCEEEEECCCEEEECCCCCC >Mature Secondary Structure MNQYLNFSLEGKVALVTGASYGIGFAIASAFAEQGATICFNDINQELVDKGLASYAEKGI CCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCEEEEHHCCHHHHHHHHHHHHHCCC KAHGYVCDVTDEPAVQAMVATIAKKVGTIDILVNNAGIIRRVPMHEMEAADFRRVIDIDL CCCCEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCEEEECCHHHHHHHHCCEEEEEEC NAPFIVSKAVLPAMMEKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTRNICSEYGE CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC YNIQCNGIGPGYIATPQTAPLREIQPDGSRHPFDTFICAKTPAGRWLDPQELTGPAVFLA EEEEECCCCCCCEECCCCCCCHHCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCEEEEE SEASNAVNGHILYVDGGILAYIGKQPK CCCCCCCCCEEEEECCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]