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The map label for this gene is yxiA [H]

Identifier: 150003573

GI number: 150003573

Start: 1326235

End: 1327770

Strand: Reverse

Name: yxiA [H]

Synonym: BVU_1002

Alternate gene names: 150003573

Gene position: 1327770-1326235 (Counterclockwise)

Preceding gene: 150003606

Following gene: 150003572

Centisome position: 25.72

GC content: 46.55

Gene sequence:

>1536_bases
ATGGAACAGCAATTTTTTCCTCAAAGATTATTCATGGACATGAAGAGGTTAATAATAAATAGGTTGGTTGGTTTAGGCCT
GTTGGTCGTAGGGGCATTGGTATCATGCAATGCACCTACGGCTTTCGTGCCTGTTCCTTCACCGAATCCTTGGGTGGATG
ATTATACCGCCCTTTCGTCTATGGAAAATTACAAGCAGTGGGGAACGTATAATGTACACGATCCGGCCTGTAAAAAAATA
GGGGATACCTATTATATGTATTCCACTGATGCTATCTTTGCCGAGAACCGGAAAGAGGCGGAAGAGAAGAATGTACCGTT
AGGTTTTATCCAGGTACGCAAATCAAAAGATCTGGTACATTGGGATTTTGTGGGATGGGCCTTTCCCGAAATACCTGCTC
CGGCTATAGAATGGGTCCATAGTCAGGCGGAGGGAAAAGGGGCGACTAACATTTGGGCTCCCTTCCTGATGCCTTATCAG
GGTATTTATCGTTTGTATTATTGTGTATCGGCATTCGGCAGGAATACATCCTATATCGGTATGGCCGAGTCGGATTCTCC
CGAAGGTCCCTGGATACAGAAAGGGTGTGTGGTCAAGACAGGGGAAGGGGATGCGATGAATGCCATAGATCCTTCTGTTA
TTGAGGACCCGGAAACCGGAAAGTGGTGGATGCATTATGGCTCTTATTTCGGCGGTCTGTACTGTGTGGAACTGAATCCC
GAAACAGGAATGACTAAGCAGTCGGAGGATCATGGGCACTTGATAGCACGCCGGGCCAATTACCGGAAAGACAACTTGGA
AGCGCCGGAAATCATGTATCAGCCGGAACTTGGCAAATATTATCTGTTTACATCCTACGATCCGTTGATGACTACCTATA
ATGTACGTGTCGCTTATTCCGATTCTCCCGAAGGACCTTTTGTGGATTTCTATGGAGAGGATATAAAAGATACAACGAAT
AATGTTCCCATATTGACAGCTCCTTATCGCTTCGAAAATCATCCGGGATGGGCGGGAACGGCTCATTGCGGTCTTATTGA
TGCCGGTGACGGCCGTTATTTTATGGCTCACCAGGGACGTCTCTCTCCTCAGAACCATTTGATGGATCTGCATGTGCGTG
AAGTGTTCTTTACTGTGAATGGATGGCCCGTGGTTTCTCCCGAACGCTATGCGGGTACTGCTCCGCGCTCTTTCACTAAA
GAAGATTTGGTAGGTGAGTGGGAAATTATCCGCATTCAGGAACCACCTTTGGAACGTAGCTTGGAGGCCGGTCAGATATT
GTGGGGCGAAGGAGACTTGCGGAATGGTGAGCAGGCATTATCTGCCCGTGTCGTTTTGGAAGCAGATGGCAGTGCGGGAG
ATGCAGTATGGGGGTTTAATGCTAAAAAACAGCTTCTTACTATAAAAACAGCGACAGAAGATATTAACAATTTGATTATC
TTTGCCGGACACGATTGGGAAAATGAGACAGAAACCATTCTCTTTACTGGTCTGGATGCTCAAGGGCATTCTGTATGGGG
AAAGAGAATTAACTAA

Upstream 100 bases:

>100_bases
ATTAGTCAATGTGTCAATGTGCCGATTGGCTGCGCTATATGCCACATGGCCATTGACAAATTAGTACATTAGCAAATGGT
CATATAATAAACAAAATACT

Downstream 100 bases:

>100_bases
TAAAAATTAATAATATTACTATCATGAAATTACACCGAACTCTATTCACGGCATGGGTATTTGCTGCCGGAGTAGCGCTA
CATGCACAGAATGCGCACAA

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MEQQFFPQRLFMDMKRLIINRLVGLGLLVVGALVSCNAPTAFVPVPSPNPWVDDYTALSSMENYKQWGTYNVHDPACKKI
GDTYYMYSTDAIFAENRKEAEEKNVPLGFIQVRKSKDLVHWDFVGWAFPEIPAPAIEWVHSQAEGKGATNIWAPFLMPYQ
GIYRLYYCVSAFGRNTSYIGMAESDSPEGPWIQKGCVVKTGEGDAMNAIDPSVIEDPETGKWWMHYGSYFGGLYCVELNP
ETGMTKQSEDHGHLIARRANYRKDNLEAPEIMYQPELGKYYLFTSYDPLMTTYNVRVAYSDSPEGPFVDFYGEDIKDTTN
NVPILTAPYRFENHPGWAGTAHCGLIDAGDGRYFMAHQGRLSPQNHLMDLHVREVFFTVNGWPVVSPERYAGTAPRSFTK
EDLVGEWEIIRIQEPPLERSLEAGQILWGEGDLRNGEQALSARVVLEADGSAGDAVWGFNAKKQLLTIKTATEDINNLII
FAGHDWENETETILFTGLDAQGHSVWGKRIN

Sequences:

>Translated_511_residues
MEQQFFPQRLFMDMKRLIINRLVGLGLLVVGALVSCNAPTAFVPVPSPNPWVDDYTALSSMENYKQWGTYNVHDPACKKI
GDTYYMYSTDAIFAENRKEAEEKNVPLGFIQVRKSKDLVHWDFVGWAFPEIPAPAIEWVHSQAEGKGATNIWAPFLMPYQ
GIYRLYYCVSAFGRNTSYIGMAESDSPEGPWIQKGCVVKTGEGDAMNAIDPSVIEDPETGKWWMHYGSYFGGLYCVELNP
ETGMTKQSEDHGHLIARRANYRKDNLEAPEIMYQPELGKYYLFTSYDPLMTTYNVRVAYSDSPEGPFVDFYGEDIKDTTN
NVPILTAPYRFENHPGWAGTAHCGLIDAGDGRYFMAHQGRLSPQNHLMDLHVREVFFTVNGWPVVSPERYAGTAPRSFTK
EDLVGEWEIIRIQEPPLERSLEAGQILWGEGDLRNGEQALSARVVLEADGSAGDAVWGFNAKKQLLTIKTATEDINNLII
FAGHDWENETETILFTGLDAQGHSVWGKRIN
>Mature_511_residues
MEQQFFPQRLFMDMKRLIINRLVGLGLLVVGALVSCNAPTAFVPVPSPNPWVDDYTALSSMENYKQWGTYNVHDPACKKI
GDTYYMYSTDAIFAENRKEAEEKNVPLGFIQVRKSKDLVHWDFVGWAFPEIPAPAIEWVHSQAEGKGATNIWAPFLMPYQ
GIYRLYYCVSAFGRNTSYIGMAESDSPEGPWIQKGCVVKTGEGDAMNAIDPSVIEDPETGKWWMHYGSYFGGLYCVELNP
ETGMTKQSEDHGHLIARRANYRKDNLEAPEIMYQPELGKYYLFTSYDPLMTTYNVRVAYSDSPEGPFVDFYGEDIKDTTN
NVPILTAPYRFENHPGWAGTAHCGLIDAGDGRYFMAHQGRLSPQNHLMDLHVREVFFTVNGWPVVSPERYAGTAPRSFTK
EDLVGEWEIIRIQEPPLERSLEAGQILWGEGDLRNGEQALSARVVLEADGSAGDAVWGFNAKKQLLTIKTATEDINNLII
FAGHDWENETETILFTGLDAQGHSVWGKRIN

Specific function: Unknown

COG id: COG3507

COG function: function code G; Beta-xylosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 43 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006710 [H]

Pfam domain/function: PF04616 Glyco_hydro_43 [H]

EC number: NA

Molecular weight: Translated: 57637; Mature: 57637

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQQFFPQRLFMDMKRLIINRLVGLGLLVVGALVSCNAPTAFVPVPSPNPWVDDYTALSS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHH
MENYKQWGTYNVHDPACKKIGDTYYMYSTDAIFAENRKEAEEKNVPLGFIQVRKSKDLVH
HHHHHHCCCCCCCCHHHHHCCCEEEEEECCEEEECCCHHHHHCCCCEEEEEEECCCCCEE
WDFVGWAFPEIPAPAIEWVHSQAEGKGATNIWAPFLMPYQGIYRLYYCVSAFGRNTSYIG
EEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
MAESDSPEGPWIQKGCVVKTGEGDAMNAIDPSVIEDPETGKWWMHYGSYFGGLYCVELNP
EECCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCEEEHHCCCCCEEEEEECC
ETGMTKQSEDHGHLIARRANYRKDNLEAPEIMYQPELGKYYLFTSYDPLMTTYNVRVAYS
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCEEEEECCCCCEEEEEEEEEEC
DSPEGPFVDFYGEDIKDTTNNVPILTAPYRFENHPGWAGTAHCGLIDAGDGRYFMAHQGR
CCCCCCEEECCCCCCCCCCCCCCEEECCCEECCCCCCCCCCCCCEEECCCCCEEEEECCC
LSPQNHLMDLHVREVFFTVNGWPVVSPERYAGTAPRSFTKEDLVGEWEIIRIQEPPLERS
CCHHHCEEEEEEEEEEEEECCEEECCCHHHCCCCCCCCCHHHCCCCEEEEEECCCCHHHC
LEAGQILWGEGDLRNGEQALSARVVLEADGSAGDAVWGFNAKKQLLTIKTATEDINNLII
CCCCEEEECCCCCCCCHHHEEEEEEEEECCCCCCEEECCCCCCEEEEEEECCCCCCCEEE
FAGHDWENETETILFTGLDAQGHSVWGKRIN
EECCCCCCCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MEQQFFPQRLFMDMKRLIINRLVGLGLLVVGALVSCNAPTAFVPVPSPNPWVDDYTALSS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHH
MENYKQWGTYNVHDPACKKIGDTYYMYSTDAIFAENRKEAEEKNVPLGFIQVRKSKDLVH
HHHHHHCCCCCCCCHHHHHCCCEEEEEECCEEEECCCHHHHHCCCCEEEEEEECCCCCEE
WDFVGWAFPEIPAPAIEWVHSQAEGKGATNIWAPFLMPYQGIYRLYYCVSAFGRNTSYIG
EEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
MAESDSPEGPWIQKGCVVKTGEGDAMNAIDPSVIEDPETGKWWMHYGSYFGGLYCVELNP
EECCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCEEEHHCCCCCEEEEEECC
ETGMTKQSEDHGHLIARRANYRKDNLEAPEIMYQPELGKYYLFTSYDPLMTTYNVRVAYS
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCEEEEECCCCCEEEEEEEEEEC
DSPEGPFVDFYGEDIKDTTNNVPILTAPYRFENHPGWAGTAHCGLIDAGDGRYFMAHQGR
CCCCCCEEECCCCCCCCCCCCCCEEECCCEECCCCCCCCCCCCCEEECCCCCEEEEECCC
LSPQNHLMDLHVREVFFTVNGWPVVSPERYAGTAPRSFTKEDLVGEWEIIRIQEPPLERS
CCHHHCEEEEEEEEEEEEECCEEECCCHHHCCCCCCCCCHHHCCCCEEEEEECCCCHHHC
LEAGQILWGEGDLRNGEQALSARVVLEADGSAGDAVWGFNAKKQLLTIKTATEDINNLII
CCCCEEEECCCCCCCCHHHEEEEEEEEECCCCCCEEECCCCCCEEEEEEECCCCCCCEEE
FAGHDWENETETILFTGLDAQGHSVWGKRIN
EECCCCCCCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704263; 9384377; 2454913 [H]