| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is luxQ [H]
Identifier: 150003606
GI number: 150003606
Start: 1372306
End: 1374729
Strand: Reverse
Name: luxQ [H]
Synonym: BVU_1035
Alternate gene names: 150003606
Gene position: 1374729-1372306 (Counterclockwise)
Preceding gene: 150003608
Following gene: 150003573
Centisome position: 26.63
GC content: 41.25
Gene sequence:
>2424_bases ATGGGGAAGATTCAAGAGAATGATGCAAGGTTGCAGCAGCTTGTATCAATGGCACGCATAGGATGGTGGGAGGTGGACTT TGATGAAGGAGTTTACTATTGTTCTGAGTTTGTAGCCGATTTGTTAGGAATAGAAGGGAATAAGATTTCTGCTAAAGATT TCGCGAATCTGATTTGTGAGAATTATCGGGAGCGTATTTTGGAGGAATTTCGCTCTTTCCGGATGATGGAGATTTATGAG CAGGTTTTTCCGATACATTCCAAATATGGGATGATGTGGGTCAGTACCAAGGTCGGTGAGAAGCGTATTACCAAAGAAGG TCATGTCCGCGTCATGGGTATGTTGCAATGTATTTCCCGGCAACGGATGAATATGCAGGAGCAGACGGTAGACCGGTTGA ACTCTTTATTATCTCGTTTGAACGGCATTTCCAAGTCATTGCTTGATTTTTTGCATTCTGATGATATTACCTTGGTTATC AATAAGATTTTAAAGGAGGTATTGCGCCAATTTCAAGCAGATCGTACTTATATTTTTGAATTGGACAGGAAATTGCATAC GGAAGTCTGTACCTATGAAATAGCAGTGGAGGGTATAAAAGAACGTAAGGTTTTATTGTCGGAATCTTCTATTGATTATG CCTCTTGGTGGACAGGACAGATATTGGCTGGTAATCCTATCATTCTTTTTACATTAAATTTGCTTCCTGATTCAGCCGGG GCGGATAAGCGTAGATTAGAGGAATATGGAGTGAAATCTACTATGGTGGTGCCTTTGAACTCAAAAGACGGAGTGTGGGG GTATATAGGGGTGGATATGGTGCGTGAACACCGGAATTGGTGCAATGAGGATTATCAATGGTTTGTCTCTTTGGGTAATA TTATCAGTATTTGTATGGAATTGAGACGCTCTGAATCTGAAGCCCGGCTGGAAAAAGCTTATTTGCAGAATATTTATAAG AATCTTCCTGCTGGTATCGAGTTGTATGATAAGGATGGGTTTATGACAGATTTGAATGACAAGGAGATGGAAATCTTCGG TCTCCGGCATAAGGAGGATGTGATAGGATTGAATTTATTTGATAATCCTTTGCTGCCGCAGGGGTTGAAAGATAAGTTGA AAGCAGGAGCACCTATTGATATGTCGTTTAATTATGATTTCGACCGTTTGGACGGCTATTATTCTACTTCTCGCACCGGT ACTATCAGTTTGATCTCGAAATTCGCTCCACTTTATGATGCTTTGGGCAATCTGATAAATATATTGTTGATCAATATTGA TAATACGGAAACAACAAATGCATATAGCAAAATACAGGACTTTGAGGAGTTTTTCACATTGATTGGTAACTATGCCAAAG TAGGATATGCCCATTTTAATGCCTTGAAATGTGATGGCTATGCTGTGAATAGCTGGTATCGGAATGTAGGTGAGAAAGAA GGAACTCCATTGAATGAGATTATCAAAGTGCATTCTCATTTTCATCCGGATGATCGCAGGATGATGCTTCGCTTCTTTGA TCAGGTATTGATACGGGAAGCCAGCCATCTGAGGCGTGATGTGCGTATATTATGTGAAGATGGCACGTATACATGGACAA GAGTCAATGTAATGGTACGCGATTTTCGTCCGGAAGACGGGATTATTGATATGGTTTGTGTCAATTATGACATAACTGAA CTGAAAGAAACGGAGCGGAAGTTGATAGCGGCAAGAGATAAAGCGGAAGAGCTGGATCGTTTGAAATCCGCTTTTCTGGC TAATATGAGTCATGAGATCCGCACTCCGCTGAATGCTATAGTGGGGTTTTCCAGCCTTTTAACGGAAACGGAAGATATGA AGGACCGCAAGCAGTACATGGCTATTGTACAGGAGAATACGGAGTTGCTTCTTCAGCTTATTTCAGATATTCTTGATTTA TCGAAGATGGAGTCGGGAGCTTTTGAATTTGTCAAGAGTGATACGGATGTCAATCTGCTTTGCAGTGAGATTATCCGTTC TTTACGCATGAAAGTGCCGGCCGGTGTGGAGCTGGTGTTTGAAGAATGCTTGCCCGGATGTCATGTATGGGCAGACAAGA ATCGTTTGAATCAAGTCATTTCCAATTTCATTAATAACGCTTTGAAGTTCACTTTTTCGGGCAGCATAACGTTAGGATAT TATAGGCAGACAGATGGGTATCTGCGGTTTTATGTTCGTGATACAGGAATGGGAATCCCGAAGAATAAGATAAAAACAGT ATTTGACCGTTTTGTGAAACTGAACAGTTTTGTTCATGGTACGGGACTTGGCTTGTCTATTTGTAAGAGTCTGGTGGAAC AGATGGGTGGAACTATCGGTGTGGAGTCAGAAGAAGGAGAAGGCTCTTGCTTTTGGTTTACTTATCCTTATCAGGAAATG GCTGGTAGTATTCTGGTACCGTAG
Upstream 100 bases:
>100_bases CATTGATTATTTATTGCCGGTGTTTATTTTTTCATGTTTAAGTATTTGGTATTGACAGATAATGATTATCTTGGTGCATA AATTAAAAGGTAGCTTGTAT
Downstream 100 bases:
>100_bases AGGGGTTTGATTAATAAAGGTTTATAGCTGTAGGGGTGAATTGAGTTCATCCGGATACATTGATTTTGTGGTATCGGGTG GGAGCATTTCACCCCTACAG
Product: two-component system sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 807; Mature: 806
Protein sequence:
>807_residues MGKIQENDARLQQLVSMARIGWWEVDFDEGVYYCSEFVADLLGIEGNKISAKDFANLICENYRERILEEFRSFRMMEIYE QVFPIHSKYGMMWVSTKVGEKRITKEGHVRVMGMLQCISRQRMNMQEQTVDRLNSLLSRLNGISKSLLDFLHSDDITLVI NKILKEVLRQFQADRTYIFELDRKLHTEVCTYEIAVEGIKERKVLLSESSIDYASWWTGQILAGNPIILFTLNLLPDSAG ADKRRLEEYGVKSTMVVPLNSKDGVWGYIGVDMVREHRNWCNEDYQWFVSLGNIISICMELRRSESEARLEKAYLQNIYK NLPAGIELYDKDGFMTDLNDKEMEIFGLRHKEDVIGLNLFDNPLLPQGLKDKLKAGAPIDMSFNYDFDRLDGYYSTSRTG TISLISKFAPLYDALGNLINILLINIDNTETTNAYSKIQDFEEFFTLIGNYAKVGYAHFNALKCDGYAVNSWYRNVGEKE GTPLNEIIKVHSHFHPDDRRMMLRFFDQVLIREASHLRRDVRILCEDGTYTWTRVNVMVRDFRPEDGIIDMVCVNYDITE LKETERKLIAARDKAEELDRLKSAFLANMSHEIRTPLNAIVGFSSLLTETEDMKDRKQYMAIVQENTELLLQLISDILDL SKMESGAFEFVKSDTDVNLLCSEIIRSLRMKVPAGVELVFEECLPGCHVWADKNRLNQVISNFINNALKFTFSGSITLGY YRQTDGYLRFYVRDTGMGIPKNKIKTVFDRFVKLNSFVHGTGLGLSICKSLVEQMGGTIGVESEEGEGSCFWFTYPYQEM AGSILVP
Sequences:
>Translated_807_residues MGKIQENDARLQQLVSMARIGWWEVDFDEGVYYCSEFVADLLGIEGNKISAKDFANLICENYRERILEEFRSFRMMEIYE QVFPIHSKYGMMWVSTKVGEKRITKEGHVRVMGMLQCISRQRMNMQEQTVDRLNSLLSRLNGISKSLLDFLHSDDITLVI NKILKEVLRQFQADRTYIFELDRKLHTEVCTYEIAVEGIKERKVLLSESSIDYASWWTGQILAGNPIILFTLNLLPDSAG ADKRRLEEYGVKSTMVVPLNSKDGVWGYIGVDMVREHRNWCNEDYQWFVSLGNIISICMELRRSESEARLEKAYLQNIYK NLPAGIELYDKDGFMTDLNDKEMEIFGLRHKEDVIGLNLFDNPLLPQGLKDKLKAGAPIDMSFNYDFDRLDGYYSTSRTG TISLISKFAPLYDALGNLINILLINIDNTETTNAYSKIQDFEEFFTLIGNYAKVGYAHFNALKCDGYAVNSWYRNVGEKE GTPLNEIIKVHSHFHPDDRRMMLRFFDQVLIREASHLRRDVRILCEDGTYTWTRVNVMVRDFRPEDGIIDMVCVNYDITE LKETERKLIAARDKAEELDRLKSAFLANMSHEIRTPLNAIVGFSSLLTETEDMKDRKQYMAIVQENTELLLQLISDILDL SKMESGAFEFVKSDTDVNLLCSEIIRSLRMKVPAGVELVFEECLPGCHVWADKNRLNQVISNFINNALKFTFSGSITLGY YRQTDGYLRFYVRDTGMGIPKNKIKTVFDRFVKLNSFVHGTGLGLSICKSLVEQMGGTIGVESEEGEGSCFWFTYPYQEM AGSILVP >Mature_806_residues GKIQENDARLQQLVSMARIGWWEVDFDEGVYYCSEFVADLLGIEGNKISAKDFANLICENYRERILEEFRSFRMMEIYEQ VFPIHSKYGMMWVSTKVGEKRITKEGHVRVMGMLQCISRQRMNMQEQTVDRLNSLLSRLNGISKSLLDFLHSDDITLVIN KILKEVLRQFQADRTYIFELDRKLHTEVCTYEIAVEGIKERKVLLSESSIDYASWWTGQILAGNPIILFTLNLLPDSAGA DKRRLEEYGVKSTMVVPLNSKDGVWGYIGVDMVREHRNWCNEDYQWFVSLGNIISICMELRRSESEARLEKAYLQNIYKN LPAGIELYDKDGFMTDLNDKEMEIFGLRHKEDVIGLNLFDNPLLPQGLKDKLKAGAPIDMSFNYDFDRLDGYYSTSRTGT ISLISKFAPLYDALGNLINILLINIDNTETTNAYSKIQDFEEFFTLIGNYAKVGYAHFNALKCDGYAVNSWYRNVGEKEG TPLNEIIKVHSHFHPDDRRMMLRFFDQVLIREASHLRRDVRILCEDGTYTWTRVNVMVRDFRPEDGIIDMVCVNYDITEL KETERKLIAARDKAEELDRLKSAFLANMSHEIRTPLNAIVGFSSLLTETEDMKDRKQYMAIVQENTELLLQLISDILDLS KMESGAFEFVKSDTDVNLLCSEIIRSLRMKVPAGVELVFEECLPGCHVWADKNRLNQVISNFINNALKFTFSGSITLGYY RQTDGYLRFYVRDTGMGIPKNKIKTVFDRFVKLNSFVHGTGLGLSICKSLVEQMGGTIGVESEEGEGSCFWFTYPYQEMA GSILVP
Specific function: At low cell density, in absence of AI-2 (autoinducer 2), luxQ has a kinase activity and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is t
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI145693157, Length=252, Percent_Identity=37.3015873015873, Blast_Score=147, Evalue=3e-36, Organism=Escherichia coli, GI1789149, Length=234, Percent_Identity=35.4700854700855, Blast_Score=142, Evalue=7e-35, Organism=Escherichia coli, GI48994928, Length=239, Percent_Identity=33.4728033472803, Blast_Score=136, Evalue=4e-33, Organism=Escherichia coli, GI87081816, Length=248, Percent_Identity=35.8870967741936, Blast_Score=133, Evalue=4e-32, Organism=Escherichia coli, GI1788713, Length=256, Percent_Identity=32.03125, Blast_Score=130, Evalue=3e-31, Organism=Escherichia coli, GI1786912, Length=232, Percent_Identity=31.0344827586207, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1786600, Length=273, Percent_Identity=28.2051282051282, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1790436, Length=214, Percent_Identity=28.5046728971963, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1788393, Length=215, Percent_Identity=30.2325581395349, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1788549, Length=251, Percent_Identity=26.6932270916335, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1786783, Length=239, Percent_Identity=27.1966527196653, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1787894, Length=242, Percent_Identity=26.0330578512397, Blast_Score=71, Evalue=3e-13, Organism=Escherichia coli, GI87082128, Length=250, Percent_Identity=24.4, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI1788279, Length=209, Percent_Identity=29.1866028708134, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI1790551, Length=213, Percent_Identity=25.8215962441315, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 92896; Mature: 92765
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKIQENDARLQQLVSMARIGWWEVDFDEGVYYCSEFVADLLGIEGNKISAKDFANLICE CCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH NYRERILEEFRSFRMMEIYEQVFPIHSKYGMMWVSTKVGEKRITKEGHVRVMGMLQCISR HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCHHHCCCCCCHHHHHHHHHHHH QRMNMQEQTVDRLNSLLSRLNGISKSLLDFLHSDDITLVINKILKEVLRQFQADRTYIFE HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEH LDRKLHTEVCTYEIAVEGIKERKVLLSESSIDYASWWTGQILAGNPIILFTLNLLPDSAG HHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHCCCCEEEECCCEEEEEEEECCCCCC ADKRRLEEYGVKSTMVVPLNSKDGVWGYIGVDMVREHRNWCNEDYQWFVSLGNIISICME CHHHHHHHCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LRRSESEARLEKAYLQNIYKNLPAGIELYDKDGFMTDLNDKEMEIFGLRHKEDVIGLNLF HHHCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEECCCCCCEEEEECCCCCCEEEEEEC DNPLLPQGLKDKLKAGAPIDMSFNYDFDRLDGYYSTSRTGTISLISKFAPLYDALGNLIN CCCCCCCCHHHHHCCCCCEEEECCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHE ILLINIDNTETTNAYSKIQDFEEFFTLIGNYAKVGYAHFNALKCDGYAVNSWYRNVGEKE EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEHHHHHHHCCCCC GTPLNEIIKVHSHFHPDDRRMMLRFFDQVLIREASHLRRDVRILCEDGTYTWTRVNVMVR CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEEEEEE DFRPEDGIIDMVCVNYDITELKETERKLIAARDKAEELDRLKSAFLANMSHEIRTPLNAI ECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH VGFSSLLTETEDMKDRKQYMAIVQENTELLLQLISDILDLSKMESGAFEFVKSDTDVNLL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHH CSEIIRSLRMKVPAGVELVFEECLPGCHVWADKNRLNQVISNFINNALKFTFSGSITLGY HHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHEEEEEECCEEEEE YRQTDGYLRFYVRDTGMGIPKNKIKTVFDRFVKLNSFVHGTGLGLSICKSLVEQMGGTIG EEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEE VESEEGEGSCFWFTYPYQEMAGSILVP CCCCCCCCCEEEEECCHHHHCCCCCCC >Mature Secondary Structure GKIQENDARLQQLVSMARIGWWEVDFDEGVYYCSEFVADLLGIEGNKISAKDFANLICE CCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH NYRERILEEFRSFRMMEIYEQVFPIHSKYGMMWVSTKVGEKRITKEGHVRVMGMLQCISR HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCHHHCCCCCCHHHHHHHHHHHH QRMNMQEQTVDRLNSLLSRLNGISKSLLDFLHSDDITLVINKILKEVLRQFQADRTYIFE HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEH LDRKLHTEVCTYEIAVEGIKERKVLLSESSIDYASWWTGQILAGNPIILFTLNLLPDSAG HHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHCCCCEEEECCCEEEEEEEECCCCCC ADKRRLEEYGVKSTMVVPLNSKDGVWGYIGVDMVREHRNWCNEDYQWFVSLGNIISICME CHHHHHHHCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LRRSESEARLEKAYLQNIYKNLPAGIELYDKDGFMTDLNDKEMEIFGLRHKEDVIGLNLF HHHCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEECCCCCCEEEEECCCCCCEEEEEEC DNPLLPQGLKDKLKAGAPIDMSFNYDFDRLDGYYSTSRTGTISLISKFAPLYDALGNLIN CCCCCCCCHHHHHCCCCCEEEECCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHE ILLINIDNTETTNAYSKIQDFEEFFTLIGNYAKVGYAHFNALKCDGYAVNSWYRNVGEKE EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEHHHHHHHCCCCC GTPLNEIIKVHSHFHPDDRRMMLRFFDQVLIREASHLRRDVRILCEDGTYTWTRVNVMVR CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEEEEEE DFRPEDGIIDMVCVNYDITELKETERKLIAARDKAEELDRLKSAFLANMSHEIRTPLNAI ECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH VGFSSLLTETEDMKDRKQYMAIVQENTELLLQLISDILDLSKMESGAFEFVKSDTDVNLL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHH CSEIIRSLRMKVPAGVELVFEECLPGCHVWADKNRLNQVISNFINNALKFTFSGSITLGY HHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHEEEEEECCEEEEE YRQTDGYLRFYVRDTGMGIPKNKIKTVFDRFVKLNSFVHGTGLGLSICKSLVEQMGGTIG EEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEE VESEEGEGSCFWFTYPYQEMAGSILVP CCCCCCCCCEEEEECCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7984107 [H]