| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is wzxC [H]
Identifier: 150003456
GI number: 150003456
Start: 1188097
End: 1189533
Strand: Direct
Name: wzxC [H]
Synonym: BVU_0883
Alternate gene names: 150003456
Gene position: 1188097-1189533 (Clockwise)
Preceding gene: 150003455
Following gene: 150003457
Centisome position: 23.01
GC content: 44.05
Gene sequence:
>1437_bases ATGGCAGAACAATCCTTGAAAGAAAAGACAGCAAAAGGCCTCTTCTGGGGCGGATTAAGCAATGGAGTACAGCAGCTGCT GAATCTTTTTTTCGGGATATTCCTGTCACGCATTCTGAATGCGGAAGATTATGGCATGGTGGGAATGCTGTCCATCTTCT CCCTTATTGCAGGCTCTTTGCAGGAAAGCGGGTTCACGGCCGCCCTAGCCAACAAACGGGATATCTCCCACAAAGACTAT AATGCCGTATTCTGGTTCAGTACCGGGCTAAGTGCCTGTCTCTACCTCATTCTGTTCCTTTGCGCCCCACTCATTGCCGA ATTCTATCACACTCCCGAACTGACAGCTTTGGCACGATACACTTTCCTCGGTTTCTTTGTAGCCAGTTTGGGCATTGCCC ACAGTGCTTACCTGTTCCGCAACTTAATGGTCAAGCAAAAGGCAATGGCGGTCACTATCGGATTAACCGCCTCAGGAACT ATCGGTATAACTATGGCCTGCTTGGGATTTGCCTATTGGGGGATAGCCACACAAAGCATTGTCTATGTAGGAACCATTAA TATCTGTTATTGGTGCTTCTCACCCTGGCGACCTACACTTACTTTCGACTTCAAGCCTTTGAGAGGGATGCTTTCTTTCA GCAGCAAATTATTAGTAACCAATATATTCAACCACATCAATAATAATATCTTTACCGTTATCCTTGGTAAATTCTATTCG GGACAAGAAGTAGGCTATTTTACTCAAGCTAATAAATGGAATTATATGGGACATTCATTAATTTCAGGAACAGTCAACAG TGTGGCCCAACCTGTACTTTCCAGTTTGTCGGATGAAAGGGAACGCCAACAACGCGCTTTCCGGAAGATGCTCCGCTTCA CTGCCTTTATTTCTTTTCCGGCTATGTTAGGATTATCATTAATCGCACCCGAACTGATTATACTGACTATTACAGACAAA TGGCTACCCAGTGCCTTCATCCTGCAATTGCTCTGCATCGGTGGCGCATTCATTCCCATAACCAATTTGTATTCCAACCT AGTCATCAGCAAAGGAAAATCGGATATCTATATGTGGAATACCATCGGCTTAGGCATCATCCAGTTAACAACCATGCTTC TGCTCTATCCATACGGCGTACATACCATGATTATAGTGTATGTATCCATCAATATCTGCTGGCTGTTTGTATGGCACTAT TTTGTATGGAAACAAATACGGCTCAGCTTGTTTGCAGCGCTGAAAGACATCCTTCCGTTTGCCTTCATAGCTACCGCAGT AATGGCGGCTACCTATTATATCACTATCGGCTTTGCCAATCTGTATTTATTAATGGCAAGCAAAATGATCATAGCCGGCA CACTCTACACAGCCATCCTGTGGTTGAGCGGCTCCGTCACTTTTAAAGAGAGTTTACACTATATAATCAAGAAATAA
Upstream 100 bases:
>100_bases GGGCAGTGAAGTGAAATAATATACACCCAAATACAGAAAAGGCTGAAAGCAACTGAAACGTCCGCTTTCAGCCTGACTGT TTTATAATCTATCTATAAAA
Downstream 100 bases:
>100_bases TGGCTGCTACACGTCACTCCGGATTAGAATGTTTACGAATTATCAGTATCATACTGATTGTATCCATGCATATTCTAGGA AATACCTTCCACACCAGTAA
Product: putative lipopolysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MAEQSLKEKTAKGLFWGGLSNGVQQLLNLFFGIFLSRILNAEDYGMVGMLSIFSLIAGSLQESGFTAALANKRDISHKDY NAVFWFSTGLSACLYLILFLCAPLIAEFYHTPELTALARYTFLGFFVASLGIAHSAYLFRNLMVKQKAMAVTIGLTASGT IGITMACLGFAYWGIATQSIVYVGTINICYWCFSPWRPTLTFDFKPLRGMLSFSSKLLVTNIFNHINNNIFTVILGKFYS GQEVGYFTQANKWNYMGHSLISGTVNSVAQPVLSSLSDERERQQRAFRKMLRFTAFISFPAMLGLSLIAPELIILTITDK WLPSAFILQLLCIGGAFIPITNLYSNLVISKGKSDIYMWNTIGLGIIQLTTMLLLYPYGVHTMIIVYVSINICWLFVWHY FVWKQIRLSLFAALKDILPFAFIATAVMAATYYITIGFANLYLLMASKMIIAGTLYTAILWLSGSVTFKESLHYIIKK
Sequences:
>Translated_478_residues MAEQSLKEKTAKGLFWGGLSNGVQQLLNLFFGIFLSRILNAEDYGMVGMLSIFSLIAGSLQESGFTAALANKRDISHKDY NAVFWFSTGLSACLYLILFLCAPLIAEFYHTPELTALARYTFLGFFVASLGIAHSAYLFRNLMVKQKAMAVTIGLTASGT IGITMACLGFAYWGIATQSIVYVGTINICYWCFSPWRPTLTFDFKPLRGMLSFSSKLLVTNIFNHINNNIFTVILGKFYS GQEVGYFTQANKWNYMGHSLISGTVNSVAQPVLSSLSDERERQQRAFRKMLRFTAFISFPAMLGLSLIAPELIILTITDK WLPSAFILQLLCIGGAFIPITNLYSNLVISKGKSDIYMWNTIGLGIIQLTTMLLLYPYGVHTMIIVYVSINICWLFVWHY FVWKQIRLSLFAALKDILPFAFIATAVMAATYYITIGFANLYLLMASKMIIAGTLYTAILWLSGSVTFKESLHYIIKK >Mature_477_residues AEQSLKEKTAKGLFWGGLSNGVQQLLNLFFGIFLSRILNAEDYGMVGMLSIFSLIAGSLQESGFTAALANKRDISHKDYN AVFWFSTGLSACLYLILFLCAPLIAEFYHTPELTALARYTFLGFFVASLGIAHSAYLFRNLMVKQKAMAVTIGLTASGTI GITMACLGFAYWGIATQSIVYVGTINICYWCFSPWRPTLTFDFKPLRGMLSFSSKLLVTNIFNHINNNIFTVILGKFYSG QEVGYFTQANKWNYMGHSLISGTVNSVAQPVLSSLSDERERQQRAFRKMLRFTAFISFPAMLGLSLIAPELIILTITDKW LPSAFILQLLCIGGAFIPITNLYSNLVISKGKSDIYMWNTIGLGIIQLTTMLLLYPYGVHTMIIVYVSINICWLFVWHYF VWKQIRLSLFAALKDILPFAFIATAVMAATYYITIGFANLYLLMASKMIIAGTLYTAILWLSGSVTFKESLHYIIKK
Specific function: Lipopolysaccharide biosynthesis. [C]
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide synthase family [H]
Homologues:
Organism=Escherichia coli, GI1788359, Length=360, Percent_Identity=25.5555555555556, Blast_Score=130, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002797 [H]
Pfam domain/function: PF01943 Polysacc_synt [H]
EC number: NA
Molecular weight: Translated: 53537; Mature: 53406
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQSLKEKTAKGLFWGGLSNGVQQLLNLFFGIFLSRILNAEDYGMVGMLSIFSLIAGSL CCCHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH QESGFTAALANKRDISHKDYNAVFWFSTGLSACLYLILFLCAPLIAEFYHTPELTALARY HHCCCEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH TFLGFFVASLGIAHSAYLFRNLMVKQKAMAVTIGLTASGTIGITMACLGFAYWGIATQSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCE VYVGTINICYWCFSPWRPTLTFDFKPLRGMLSFSSKLLVTNIFNHINNNIFTVILGKFYS EEEEEHEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC GQEVGYFTQANKWNYMGHSLISGTVNSVAQPVLSSLSDERERQQRAFRKMLRFTAFISFP CCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMLGLSLIAPELIILTITDKWLPSAFILQLLCIGGAFIPITNLYSNLVISKGKSDIYMWN HHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCEEEEE TIGLGIIQLTTMLLLYPYGVHTMIIVYVSINICWLFVWHYFVWKQIRLSLFAALKDILPF HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFIATAVMAATYYITIGFANLYLLMASKMIIAGTLYTAILWLSGSVTFKESLHYIIKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure AEQSLKEKTAKGLFWGGLSNGVQQLLNLFFGIFLSRILNAEDYGMVGMLSIFSLIAGSL CCHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH QESGFTAALANKRDISHKDYNAVFWFSTGLSACLYLILFLCAPLIAEFYHTPELTALARY HHCCCEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH TFLGFFVASLGIAHSAYLFRNLMVKQKAMAVTIGLTASGTIGITMACLGFAYWGIATQSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCE VYVGTINICYWCFSPWRPTLTFDFKPLRGMLSFSSKLLVTNIFNHINNNIFTVILGKFYS EEEEEHEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC GQEVGYFTQANKWNYMGHSLISGTVNSVAQPVLSSLSDERERQQRAFRKMLRFTAFISFP CCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMLGLSLIAPELIILTITDKWLPSAFILQLLCIGGAFIPITNLYSNLVISKGKSDIYMWN HHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCEEEEE TIGLGIIQLTTMLLLYPYGVHTMIIVYVSINICWLFVWHYFVWKQIRLSLFAALKDILPF HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFIATAVMAATYYITIGFANLYLLMASKMIIAGTLYTAILWLSGSVTFKESLHYIIKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8759852; 9097040; 9278503 [H]