Click here to switch to the map view.

The map label for this gene is omp85 [H]

Identifier: 150003440

GI number: 150003440

Start: 1169696

End: 1171498

Strand: Direct

Name: omp85 [H]

Synonym: BVU_0867

Alternate gene names: 150003440

Gene position: 1169696-1171498 (Clockwise)

Preceding gene: 150003439

Following gene: 150003441

Centisome position: 22.65

GC content: 42.37

Gene sequence:

>1803_bases
ATGCTATATCGTATTTCACTTATACTATTAACGCTTACATGCCTATTTTGCTTTTCAACAGGCAGTTACGCCCAAGAAGC
AAACGTAGAAGAAAACGACAATCCAGTCATACTTTATTCCGGAACGCCCAAGAAGTATGAAATCGGCGGAATCAAAGTAG
AAGGCGTAAAAAACTATGAAGATTATGTATTGATCGGACTTTCAGGACTATCGGTAGGACAGACCATTGTTGTTCCGGGA
GATGACATCACCACAGCTGTAAAACGTTATTGGAGACACGGACTGTTCTCGGATGTACAAATCCTAGCTGAAAAAATTGT
TGGAGACAAGATATATTTAAAAATCATCCTGGCCCAACGTCCACGTATTGCCGACATTCGTTACCACGGCGTAAAGAAAA
GCGAGCGTGAAGATTTGGAAGCCAAACTAGGTTTGGTAAAAGGAAGCCAGATTACTCCCAACTTGATAGACCGTGCTAAA
ATATTAATCAAGAAACATTTCGATGAAAAAGGTTTTAAAAACGCCGAAGTGACCATCGTAGAGCGTGATTTGGCTGACAA
TAAGGACCAAGTGGATGTTGATGTGATGATTGACAAGAAAGAAAAGGTGAAAGTCCACAAGATCACCATTGACGGCAACA
CCGTGTTAAGTGACAAGAAGTTAAAACGCGTCATGAAGAAGACGAATGAGAAAAACAAACTTGTCAACCTTTTCCGTACC
AAAAAATTCATTGAAGAGAAATACGAAGAAGACAAACAGCATATCATCGACAAATACAACGAATTAGGTTACCGCGACGC
ACAAATTGTTGTGGACAGTGTTTCTCCGTACGATGACCGTACCGTCGACGTGTACATGAAAATAGAAGAAGGTGACAAAT
ACTATCTGCGCAACGTGACCTGGGTAGGTAACACCATTTATGCTTCGGACTGGCTGAACGAACAGCTCCGTATGAAAAAG
GGAGATGTTTATAACCAGAAATTAATGACCGAGCGTCTGACCGGTGATGAAGATGCTATCGGTAACTACTACTATAATAA
AGGATACGTTTTCTATAACCTTGACCCCGTAGAAGTAAACATAGACGGCGACTCCATTGATTTGGAAATGCGTATTCAGG
AAGGTCCTCAGGCCTCTATCAGCAAAGTGCGTATCAACGGTAACGACCGTTTGTATGAAAACGTAGTACGCCGTGAGTTA
AGAACCAAGCCGGGAGACCTGTTCAGCAAAGAAGCATTGGAACGTTCTTATCGTGAGATAGCCCAAATGGGACACTTCAA
CCCTGAAAATATCCAGCCGGATGTACAACCGGACCCGACCAACGGTACGGTAGACATCAACTGGAACCTGGAGTCCAAAG
CAAACGACCAGGTAGAATTCTCGGCAGGTTGGGGACAGACCGGTGTTATCGGTAAATTAAGTTTGAAGTTCACGAACTTC
TCTATGGCCAACTTGTTCCATAAGAGTGACAACTACCGCGGATTCCTGCCACAGGGTGATGGACAGACATTAACCATCAG
CGGACAGACCAACGGTAGTTATTACCAGTCATATAGTGTATCGTTCTTTGACCCATGGTTTGGCGGAAAACGTCCGAATT
CATTCTCTGTTTCGGCTTTCTACTCCATACAGACAGATATCAGCAGTAACTACTATAACTCAGCTTATATGAATAATTAC
TACAATTATTACAGCGGTTATGGAAATTATTATGGCGGATATAATAACAACTACGAGTCTTTTTATGACCCGATAAATCT
ATCCAGATGTATGGAGCATCTATCGGTTGGGGTAAGCGTTTGA

Upstream 100 bases:

>100_bases
CGGACTTCCGCGAAGAAGAATTTTGCAAAGCCATTTATGATTATCAGAAAAGAGAACGCCGTTTCGGCAAAACCAGTGAA
CAAATATAAAGTTAGATAAA

Downstream 100 bases:

>100_bases
GATGGCCGGATGACTATTTTACCTTGTCAGCCGAACTTTCTTACCAGCGCTTTATTTTGAAAGACTGGAGCTACTTGTAT
ATCAAGTTGAACAACGGAGA

Product: putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 600

Protein sequence:

>600_residues
MLYRISLILLTLTCLFCFSTGSYAQEANVEENDNPVILYSGTPKKYEIGGIKVEGVKNYEDYVLIGLSGLSVGQTIVVPG
DDITTAVKRYWRHGLFSDVQILAEKIVGDKIYLKIILAQRPRIADIRYHGVKKSEREDLEAKLGLVKGSQITPNLIDRAK
ILIKKHFDEKGFKNAEVTIVERDLADNKDQVDVDVMIDKKEKVKVHKITIDGNTVLSDKKLKRVMKKTNEKNKLVNLFRT
KKFIEEKYEEDKQHIIDKYNELGYRDAQIVVDSVSPYDDRTVDVYMKIEEGDKYYLRNVTWVGNTIYASDWLNEQLRMKK
GDVYNQKLMTERLTGDEDAIGNYYYNKGYVFYNLDPVEVNIDGDSIDLEMRIQEGPQASISKVRINGNDRLYENVVRREL
RTKPGDLFSKEALERSYREIAQMGHFNPENIQPDVQPDPTNGTVDINWNLESKANDQVEFSAGWGQTGVIGKLSLKFTNF
SMANLFHKSDNYRGFLPQGDGQTLTISGQTNGSYYQSYSVSFFDPWFGGKRPNSFSVSAFYSIQTDISSNYYNSAYMNNY
YNYYSGYGNYYGGYNNNYESFYDPINLSRCMEHLSVGVSV

Sequences:

>Translated_600_residues
MLYRISLILLTLTCLFCFSTGSYAQEANVEENDNPVILYSGTPKKYEIGGIKVEGVKNYEDYVLIGLSGLSVGQTIVVPG
DDITTAVKRYWRHGLFSDVQILAEKIVGDKIYLKIILAQRPRIADIRYHGVKKSEREDLEAKLGLVKGSQITPNLIDRAK
ILIKKHFDEKGFKNAEVTIVERDLADNKDQVDVDVMIDKKEKVKVHKITIDGNTVLSDKKLKRVMKKTNEKNKLVNLFRT
KKFIEEKYEEDKQHIIDKYNELGYRDAQIVVDSVSPYDDRTVDVYMKIEEGDKYYLRNVTWVGNTIYASDWLNEQLRMKK
GDVYNQKLMTERLTGDEDAIGNYYYNKGYVFYNLDPVEVNIDGDSIDLEMRIQEGPQASISKVRINGNDRLYENVVRREL
RTKPGDLFSKEALERSYREIAQMGHFNPENIQPDVQPDPTNGTVDINWNLESKANDQVEFSAGWGQTGVIGKLSLKFTNF
SMANLFHKSDNYRGFLPQGDGQTLTISGQTNGSYYQSYSVSFFDPWFGGKRPNSFSVSAFYSIQTDISSNYYNSAYMNNY
YNYYSGYGNYYGGYNNNYESFYDPINLSRCMEHLSVGVSV
>Mature_600_residues
MLYRISLILLTLTCLFCFSTGSYAQEANVEENDNPVILYSGTPKKYEIGGIKVEGVKNYEDYVLIGLSGLSVGQTIVVPG
DDITTAVKRYWRHGLFSDVQILAEKIVGDKIYLKIILAQRPRIADIRYHGVKKSEREDLEAKLGLVKGSQITPNLIDRAK
ILIKKHFDEKGFKNAEVTIVERDLADNKDQVDVDVMIDKKEKVKVHKITIDGNTVLSDKKLKRVMKKTNEKNKLVNLFRT
KKFIEEKYEEDKQHIIDKYNELGYRDAQIVVDSVSPYDDRTVDVYMKIEEGDKYYLRNVTWVGNTIYASDWLNEQLRMKK
GDVYNQKLMTERLTGDEDAIGNYYYNKGYVFYNLDPVEVNIDGDSIDLEMRIQEGPQASISKVRINGNDRLYENVVRREL
RTKPGDLFSKEALERSYREIAQMGHFNPENIQPDVQPDPTNGTVDINWNLESKANDQVEFSAGWGQTGVIGKLSLKFTNF
SMANLFHKSDNYRGFLPQGDGQTLTISGQTNGSYYQSYSVSFFDPWFGGKRPNSFSVSAFYSIQTDISSNYYNSAYMNNY
YNYYSGYGNYYGGYNNNYESFYDPINLSRCMEHLSVGVSV

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=483, Percent_Identity=23.6024844720497, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 68844; Mature: 68844

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYRISLILLTLTCLFCFSTGSYAQEANVEENDNPVILYSGTPKKYEIGGIKVEGVKNYE
CEEEHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEEECCCCCEEEECCEEEECCCCCC
DYVLIGLSGLSVGQTIVVPGDDITTAVKRYWRHGLFSDVQILAEKIVGDKIYLKIILAQR
CEEEEEECCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEEECC
PRIADIRYHGVKKSEREDLEAKLGLVKGSQITPNLIDRAKILIKKHFDEKGFKNAEVTIV
CCEEEEEECCCCCCCHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEE
ERDLADNKDQVDVDVMIDKKEKVKVHKITIDGNTVLSDKKLKRVMKKTNEKNKLVNLFRT
EECCCCCCCCEEEEEEECCCCCEEEEEEEECCCEEECHHHHHHHHHHCCCHHHHHHHHHH
KKFIEEKYEEDKQHIIDKYNELGYRDAQIVVDSVSPYDDRTVDVYMKIEEGDKYYLRNVT
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEEECCCEEEEEEEE
WVGNTIYASDWLNEQLRMKKGDVYNQKLMTERLTGDEDAIGNYYYNKGYVFYNLDPVEVN
EECCEEEECHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEECCEEEEECCEEEEE
IDGDSIDLEMRIQEGPQASISKVRINGNDRLYENVVRRELRTKPGDLFSKEALERSYREI
ECCCEEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AQMGHFNPENIQPDVQPDPTNGTVDINWNLESKANDQVEFSAGWGQTGVIGKLSLKFTNF
HHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCEEEEEEEEEECC
SMANLFHKSDNYRGFLPQGDGQTLTISGQTNGSYYQSYSVSFFDPWFGGKRPNSFSVSAF
HHHHHHHCCCCCEEECCCCCCCEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEE
YSIQTDISSNYYNSAYMNNYYNYYSGYGNYYGGYNNNYESFYDPINLSRCMEHLSVGVSV
EEEEECCCCCCCCCHHHHCCHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MLYRISLILLTLTCLFCFSTGSYAQEANVEENDNPVILYSGTPKKYEIGGIKVEGVKNYE
CEEEHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEEECCCCCEEEECCEEEECCCCCC
DYVLIGLSGLSVGQTIVVPGDDITTAVKRYWRHGLFSDVQILAEKIVGDKIYLKIILAQR
CEEEEEECCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEEECC
PRIADIRYHGVKKSEREDLEAKLGLVKGSQITPNLIDRAKILIKKHFDEKGFKNAEVTIV
CCEEEEEECCCCCCCHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEE
ERDLADNKDQVDVDVMIDKKEKVKVHKITIDGNTVLSDKKLKRVMKKTNEKNKLVNLFRT
EECCCCCCCCEEEEEEECCCCCEEEEEEEECCCEEECHHHHHHHHHHCCCHHHHHHHHHH
KKFIEEKYEEDKQHIIDKYNELGYRDAQIVVDSVSPYDDRTVDVYMKIEEGDKYYLRNVT
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEEECCCEEEEEEEE
WVGNTIYASDWLNEQLRMKKGDVYNQKLMTERLTGDEDAIGNYYYNKGYVFYNLDPVEVN
EECCEEEECHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEECCEEEEECCEEEEE
IDGDSIDLEMRIQEGPQASISKVRINGNDRLYENVVRRELRTKPGDLFSKEALERSYREI
ECCCEEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AQMGHFNPENIQPDVQPDPTNGTVDINWNLESKANDQVEFSAGWGQTGVIGKLSLKFTNF
HHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCEEEEEEEEEECC
SMANLFHKSDNYRGFLPQGDGQTLTISGQTNGSYYQSYSVSFFDPWFGGKRPNSFSVSAF
HHHHHHHCCCCCEEECCCCCCCEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEE
YSIQTDISSNYYNSAYMNNYYNYYSGYGNYYGGYNNNYESFYDPINLSRCMEHLSVGVSV
EEEEECCCCCCCCCHHHHCCHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]