| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150003441
Identifier: 150003441
GI number: 150003441
Start: 1171462
End: 1172337
Strand: Direct
Name: 150003441
Synonym: BVU_0868
Alternate gene names: NA
Gene position: 1171462-1172337 (Clockwise)
Preceding gene: 150003440
Following gene: 150003442
Centisome position: 22.69
GC content: 44.41
Gene sequence:
>876_bases ATGTATGGAGCATCTATCGGTTGGGGTAAGCGTTTGAGATGGCCGGATGACTATTTTACCTTGTCAGCCGAACTTTCTTA CCAGCGCTTTATTTTGAAAGACTGGAGCTACTTGTATATCAAGTTGAACAACGGAGAATACATGTCAACCGGTAATTGCA ACAACCTGAGTTTGAATCTGACTTTGGCACGTAACTCTACGGATAACCCGATTTTCCCGCGTCGCGGTTCTGAATTCTCG GCTTCCGTACAGCTGACTCCTCCGTACTCATTGTTCAGTAACAAGGACTACTCGGTATACGGTAAAGATGATTATGATGA AGCGGCAAGTATGTTCAACTGGATTGAATACCACAAATGGAAATTCAAATCAAAGACCTATACCGCTCTTACAGGAGGTC AGAAATGTCCGGTTATCATGACACGTGCAGAGTTCGGTTTGCTGGGTCACTATAACAAGTACAAGAAATCACCTTTTGAA ACATTCTATATGGGTGGTGACGGTATGACAGGATATAGCACCAGCTACGCTTCCGAAACCATTGCACTGCGTGGTTACGA AAACGGTTCATTGACTCCTTATGGTAGTGAAGGCTATGCTTACGTACGTTTAGGTGCAGAATTAAGATACCCGTTGATGC TGGAAAATTCGACCAGTATCTATGCATTAGGCTTCATTGAAGGAGGTAACGCATGGACAGATGTAAGCAAATTCAATCCG TTCCAGTTGAAACGCTCGGCAGGTGTCGGTGTCCGTATCTTCCTGCCGATGATTGGTATGATGGGTATTGACTGGGCATA CGGTTTCGACAAGATTAACGGATCCAGCCAGTATAGTGGAAGCCAGTTCCACTTTATCCTGGGACAAGAGTTTTAA
Upstream 100 bases:
>100_bases ATATGAATAATTACTACAATTATTACAGCGGTTATGGAAATTATTATGGCGGATATAATAACAACTACGAGTCTTTTTAT GACCCGATAAATCTATCCAG
Downstream 100 bases:
>100_bases TAACTAAAAACAATGTGATTATGAAAAAGGCTATCCTATTATCTCTATTGTTTGTGGCTTGTGTATTCACAGCCAGCGCT CAAAAGTTCGCCTTGATTGA
Product: putative outer membrane protein
Products: NA
Alternate protein names: Outer Membrane Protein Assembly Complex YaeT Protein; Surface Antigen; Outer Membrane Protein Assembly Complex Yaet Protein; Surface Antigen Family Protein; Outer Membrane Protein Assembly Factor YaeT; Outer Membrane Protein Assembly Complex; Outer Membrane Protein Assembly Complex Protein YaeT; OMP85 Family Outer Membrane Protein; Outer Membrane Protein/Protective Antigen OMA; Surface Antigen Variable Number Repeat Protein
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MYGASIGWGKRLRWPDDYFTLSAELSYQRFILKDWSYLYIKLNNGEYMSTGNCNNLSLNLTLARNSTDNPIFPRRGSEFS ASVQLTPPYSLFSNKDYSVYGKDDYDEAASMFNWIEYHKWKFKSKTYTALTGGQKCPVIMTRAEFGLLGHYNKYKKSPFE TFYMGGDGMTGYSTSYASETIALRGYENGSLTPYGSEGYAYVRLGAELRYPLMLENSTSIYALGFIEGGNAWTDVSKFNP FQLKRSAGVGVRIFLPMIGMMGIDWAYGFDKINGSSQYSGSQFHFILGQEF
Sequences:
>Translated_291_residues MYGASIGWGKRLRWPDDYFTLSAELSYQRFILKDWSYLYIKLNNGEYMSTGNCNNLSLNLTLARNSTDNPIFPRRGSEFS ASVQLTPPYSLFSNKDYSVYGKDDYDEAASMFNWIEYHKWKFKSKTYTALTGGQKCPVIMTRAEFGLLGHYNKYKKSPFE TFYMGGDGMTGYSTSYASETIALRGYENGSLTPYGSEGYAYVRLGAELRYPLMLENSTSIYALGFIEGGNAWTDVSKFNP FQLKRSAGVGVRIFLPMIGMMGIDWAYGFDKINGSSQYSGSQFHFILGQEF >Mature_291_residues MYGASIGWGKRLRWPDDYFTLSAELSYQRFILKDWSYLYIKLNNGEYMSTGNCNNLSLNLTLARNSTDNPIFPRRGSEFS ASVQLTPPYSLFSNKDYSVYGKDDYDEAASMFNWIEYHKWKFKSKTYTALTGGQKCPVIMTRAEFGLLGHYNKYKKSPFE TFYMGGDGMTGYSTSYASETIALRGYENGSLTPYGSEGYAYVRLGAELRYPLMLENSTSIYALGFIEGGNAWTDVSKFNP FQLKRSAGVGVRIFLPMIGMMGIDWAYGFDKINGSSQYSGSQFHFILGQEF
Specific function: Unknown
COG id: COG4775
COG function: function code M; Outer membrane protein/protective antigen OMA87
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33041; Mature: 33041
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS50993 NIDOGEN_G2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGASIGWGKRLRWPDDYFTLSAELSYQRFILKDWSYLYIKLNNGEYMSTGNCNNLSLNL CCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCEEEEEEECCCCEEECCCCCEEEEEE TLARNSTDNPIFPRRGSEFSASVQLTPPYSLFSNKDYSVYGKDDYDEAASMFNWIEYHKW EEECCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCCEEEECCCCHHHHHHHHHHHHHHEE KFKSKTYTALTGGQKCPVIMTRAEFGLLGHYNKYKKSPFETFYMGGDGMTGYSTSYASET EECCCEEEEECCCCCCCEEEEECCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCE IALRGYENGSLTPYGSEGYAYVRLGAELRYPLMLENSTSIYALGFIEGGNAWTDVSKFNP EEEEECCCCCCCEECCCCEEEEEECCCEECEEEEECCCCEEEEEEEECCCCCCCCCCCCC FQLKRSAGVGVRIFLPMIGMMGIDWAYGFDKINGSSQYSGSQFHFILGQEF EEEECCCCCCEEEHHHHHHHHCCCHHCCCCCCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure MYGASIGWGKRLRWPDDYFTLSAELSYQRFILKDWSYLYIKLNNGEYMSTGNCNNLSLNL CCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCEEEEEEECCCCEEECCCCCEEEEEE TLARNSTDNPIFPRRGSEFSASVQLTPPYSLFSNKDYSVYGKDDYDEAASMFNWIEYHKW EEECCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCCEEEECCCCHHHHHHHHHHHHHHEE KFKSKTYTALTGGQKCPVIMTRAEFGLLGHYNKYKKSPFETFYMGGDGMTGYSTSYASET EECCCEEEEECCCCCCCEEEEECCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCE IALRGYENGSLTPYGSEGYAYVRLGAELRYPLMLENSTSIYALGFIEGGNAWTDVSKFNP EEEEECCCCCCCEECCCCEEEEEECCCEECEEEEECCCCEEEEEEEECCCCCCCCCCCCC FQLKRSAGVGVRIFLPMIGMMGIDWAYGFDKINGSSQYSGSQFHFILGQEF EEEECCCCCCEEEHHHHHHHHCCCHHCCCCCCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA