| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is pepQ [H]
Identifier: 150003405
GI number: 150003405
Start: 1122178
End: 1123959
Strand: Direct
Name: pepQ [H]
Synonym: BVU_0828
Alternate gene names: 150003405
Gene position: 1122178-1123959 (Clockwise)
Preceding gene: 150003358
Following gene: 150003406
Centisome position: 21.73
GC content: 41.75
Gene sequence:
>1782_bases ATGAAATCGGAAATTATAAATAGAATAGCTAGTCTGCGCAATTTCATGCGTAAACACAAGCTTTCAGCCTTTATTATTCC CAGTACGGATCCCCATTCGGGAGAGTATATCCCCAAACATTGGGAAGCACGTAAATGGATATCAGGTTTCACAGGTTCGG CAGGTACGGTTGTCGTAACACTGGATAAAGCCGGACTTTGGACAGATTCACGCTATTTTCTTCAAGCGGCCGAACAATTA GAAAACACAGGTATTACTTTATTCAAGGAACGATTACCGGAAACTCCTTCCATTGTAGAGTGGTTGGGCTGTGTATTGAA TGCAGAAGACAATGTGGGTATAGACGGTTGGGTGAACAGCTATCAAGAAACAAGCAACTTACAGAAAGAATTAGAAAAAA AACAGATACACTTAACCCTTGCTCCCGATCCATTCAATGAATTATGGACAGATCGGCCTGCATTGCCCGATAACAAAGTG TTTATACATGAATTGAAATATGCCGGTCTCAGTTGCAAGGATAAAATCACTCAAATACGAGAAGCAATCCGTCGTAACAG TTGCACAGGCATTTTAATTTCCGCACTGGATGAAGTGGCATGGACCCTAAACTTACGGGGAAGTGACGTACACTGCAATC CGGTATTTGTAAGTTACCTTCTCATCACGGAATATAGTTCTACCTTATATATAATAGAGAATAAACTGTCAGATGAAGTA AAAGACTATCTAACAGAAAACGAAATTAAAGTAAGGCCTTATTCAACAATTGAAAAAGATTTAAAAGATTTTACCGGCAA ACTCCTGTTGTCAGCTAATATCAATGCCGCTGTCCATGCAGCAGCCTGCGCCCATTCCTTAATAAAAATAGCTCCTTCGC CTGTACTTTTTTTAAAAGCGATAAAGAATGAGACAGAAATAGAAGGCTTCCATCGCGCAATGAAACGCGACGGAGTAGCC ATGGTTAAATTTCTCCGCTGGCTGAAAGCTGCTGTTTCTACTGGAAATGAAACCGAAATAAGTATAGATAAGAAATTATA CGAATTCCGCGCCGGACAACCCCACTTCAATGGTATCAGTTTTGACACCATTGCCGGATATAAAGCTCATGGCGCTATTG TTCACTATGAAGCAACCCCCGAAACCGATATTCCCTTAAAACCTGAAGGCATGCTGCTGCTGGACAGTGGAGCACAATAT TTGGACGGAACAACTGATATTACTCGTACTATCGTTTTAGGAGCACTCACGAAAGAAGAAAAAACAGATTACACATTAGT CTTAAAAGGATTTATCCAACTCTCAATGGCTCAATTTCCACATGGAACTTGCGGAACACAACTAGATGCGCTGGCTCGCC TCCCTATGTGGAAAGCCGGAATCAATTACCTGCATGGAACAGGCCACGGTGTAGGTTGTTTTCTGAATGTACACGAAGGT CCTCACCAATTCCGCATGAACCACATGCCGGCCTTACTTGTTCCAGGCATGACAGTAACCAACGAGCCCGGTATATATAA AACCGGACGCCATGGAGTACGTACGGAAAATACCATGTTAATTGTTCCGTCACAAGAAACAGAATTCGGCACTTACTATA AATTCGAGCCACTTACCCTCTGCCCTATTGACAAAGAAGCCATCCTGACAGATATGCTGAGCGATGAAGAAATAACATGG TTCAACCAATATCATGAAAAAGTTTACAATTGTTTGAATCCGGAATTGAACAACGAGGAACGCGAGTGGTTAAAAGAAGT AACATCTCCTTTAAAACGGTAG
Upstream 100 bases:
>100_bases ATACTTTCTTTATTTACAAAACTTTCCGCAATTATTTATTTAAAATAATCTAGAAATCGTATCTTTGCTTTCTAGTACAA ACCATTATAAACCTATTAAA
Downstream 100 bases:
>100_bases AAATTAATTATGGCACTTATAAAATCAGTGAGAGGATTCACTCCAAAAATCGGCGAGAACTGTTATTTAGCCGATAATGC CACTATTATTGGCGATGTTG
Product: putative aminopeptidase
Products: NA
Alternate protein names: X-Pro dipeptidase; Imidodipeptidase; Proline dipeptidase; Prolidase [H]
Number of amino acids: Translated: 593; Mature: 593
Protein sequence:
>593_residues MKSEIINRIASLRNFMRKHKLSAFIIPSTDPHSGEYIPKHWEARKWISGFTGSAGTVVVTLDKAGLWTDSRYFLQAAEQL ENTGITLFKERLPETPSIVEWLGCVLNAEDNVGIDGWVNSYQETSNLQKELEKKQIHLTLAPDPFNELWTDRPALPDNKV FIHELKYAGLSCKDKITQIREAIRRNSCTGILISALDEVAWTLNLRGSDVHCNPVFVSYLLITEYSSTLYIIENKLSDEV KDYLTENEIKVRPYSTIEKDLKDFTGKLLLSANINAAVHAAACAHSLIKIAPSPVLFLKAIKNETEIEGFHRAMKRDGVA MVKFLRWLKAAVSTGNETEISIDKKLYEFRAGQPHFNGISFDTIAGYKAHGAIVHYEATPETDIPLKPEGMLLLDSGAQY LDGTTDITRTIVLGALTKEEKTDYTLVLKGFIQLSMAQFPHGTCGTQLDALARLPMWKAGINYLHGTGHGVGCFLNVHEG PHQFRMNHMPALLVPGMTVTNEPGIYKTGRHGVRTENTMLIVPSQETEFGTYYKFEPLTLCPIDKEAILTDMLSDEEITW FNQYHEKVYNCLNPELNNEEREWLKEVTSPLKR
Sequences:
>Translated_593_residues MKSEIINRIASLRNFMRKHKLSAFIIPSTDPHSGEYIPKHWEARKWISGFTGSAGTVVVTLDKAGLWTDSRYFLQAAEQL ENTGITLFKERLPETPSIVEWLGCVLNAEDNVGIDGWVNSYQETSNLQKELEKKQIHLTLAPDPFNELWTDRPALPDNKV FIHELKYAGLSCKDKITQIREAIRRNSCTGILISALDEVAWTLNLRGSDVHCNPVFVSYLLITEYSSTLYIIENKLSDEV KDYLTENEIKVRPYSTIEKDLKDFTGKLLLSANINAAVHAAACAHSLIKIAPSPVLFLKAIKNETEIEGFHRAMKRDGVA MVKFLRWLKAAVSTGNETEISIDKKLYEFRAGQPHFNGISFDTIAGYKAHGAIVHYEATPETDIPLKPEGMLLLDSGAQY LDGTTDITRTIVLGALTKEEKTDYTLVLKGFIQLSMAQFPHGTCGTQLDALARLPMWKAGINYLHGTGHGVGCFLNVHEG PHQFRMNHMPALLVPGMTVTNEPGIYKTGRHGVRTENTMLIVPSQETEFGTYYKFEPLTLCPIDKEAILTDMLSDEEITW FNQYHEKVYNCLNPELNNEEREWLKEVTSPLKR >Mature_593_residues MKSEIINRIASLRNFMRKHKLSAFIIPSTDPHSGEYIPKHWEARKWISGFTGSAGTVVVTLDKAGLWTDSRYFLQAAEQL ENTGITLFKERLPETPSIVEWLGCVLNAEDNVGIDGWVNSYQETSNLQKELEKKQIHLTLAPDPFNELWTDRPALPDNKV FIHELKYAGLSCKDKITQIREAIRRNSCTGILISALDEVAWTLNLRGSDVHCNPVFVSYLLITEYSSTLYIIENKLSDEV KDYLTENEIKVRPYSTIEKDLKDFTGKLLLSANINAAVHAAACAHSLIKIAPSPVLFLKAIKNETEIEGFHRAMKRDGVA MVKFLRWLKAAVSTGNETEISIDKKLYEFRAGQPHFNGISFDTIAGYKAHGAIVHYEATPETDIPLKPEGMLLLDSGAQY LDGTTDITRTIVLGALTKEEKTDYTLVLKGFIQLSMAQFPHGTCGTQLDALARLPMWKAGINYLHGTGHGVGCFLNVHEG PHQFRMNHMPALLVPGMTVTNEPGIYKTGRHGVRTENTMLIVPSQETEFGTYYKFEPLTLCPIDKEAILTDMLSDEEITW FNQYHEKVYNCLNPELNNEEREWLKEVTSPLKR
Specific function: Splits dipeptides with a prolyl in the C-terminal position and a nonpolar amino acid at the N-terminal position [H]
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family. Archaeal-type prolidase subfamily [H]
Homologues:
Organism=Homo sapiens, GI264681563, Length=614, Percent_Identity=39.5765472312704, Blast_Score=406, Evalue=1e-113, Organism=Homo sapiens, GI264681565, Length=614, Percent_Identity=37.785016286645, Blast_Score=374, Evalue=1e-103, Organism=Homo sapiens, GI93141226, Length=601, Percent_Identity=36.2728785357737, Blast_Score=369, Evalue=1e-102, Organism=Escherichia coli, GI1788728, Length=233, Percent_Identity=30.4721030042918, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17509539, Length=617, Percent_Identity=33.22528363047, Blast_Score=338, Evalue=7e-93, Organism=Caenorhabditis elegans, GI25149105, Length=614, Percent_Identity=29.6416938110749, Blast_Score=272, Evalue=4e-73, Organism=Saccharomyces cerevisiae, GI6322999, Length=652, Percent_Identity=35.8895705521472, Blast_Score=346, Evalue=5e-96, Organism=Drosophila melanogaster, GI17137632, Length=619, Percent_Identity=36.9951534733441, Blast_Score=371, Evalue=1e-103, Organism=Drosophila melanogaster, GI161078230, Length=598, Percent_Identity=28.7625418060201, Blast_Score=269, Evalue=4e-72, Organism=Drosophila melanogaster, GI21357287, Length=598, Percent_Identity=28.7625418060201, Blast_Score=269, Evalue=4e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000587 - InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR001131 [H]
Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]
EC number: =3.4.13.9 [H]
Molecular weight: Translated: 66877; Mature: 66877
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSEIINRIASLRNFMRKHKLSAFIIPSTDPHSGEYIPKHWEARKWISGFTGSAGTVVVT CHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEE LDKAGLWTDSRYFLQAAEQLENTGITLFKERLPETPSIVEWLGCVLNAEDNVGIDGWVNS EECCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHH YQETSNLQKELEKKQIHLTLAPDPFNELWTDRPALPDNKVFIHELKYAGLSCKDKITQIR HHHHHHHHHHHHHCEEEEEECCCCHHHHHCCCCCCCCCCEEEEEHHHCCCCHHHHHHHHH EAIRRNSCTGILISALDEVAWTLNLRGSDVHCNPVFVSYLLITEYSSTLYIIENKLSDEV HHHHHCCCCHHHHHHHHHHEEEEEECCCCEECCHHHHHHHHHHCCCCEEEEEECHHHHHH KDYLTENEIKVRPYSTIEKDLKDFTGKLLLSANINAAVHAAACAHSLIKIAPSPVLFLKA HHHHCCCCEEECCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHH IKNETEIEGFHRAMKRDGVAMVKFLRWLKAAVSTGNETEISIDKKLYEFRAGQPHFNGIS HCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCCCCC FDTIAGYKAHGAIVHYEATPETDIPLKPEGMLLLDSGAQYLDGTTDITRTIVLGALTKEE CHHCCCEECCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCC KTDYTLVLKGFIQLSMAQFPHGTCGTQLDALARLPMWKAGINYLHGTGHGVGCFLNVHEG CCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHCCCEECCCCCCEEEEEEECCC PHQFRMNHMPALLVPGMTVTNEPGIYKTGRHGVRTENTMLIVPSQETEFGTYYKFEPLTL CHHHHHCCCCEEEECCEEECCCCCCEECCCCCCCCCCEEEEEECCCCCCCCEEEECCEEE CPIDKEAILTDMLSDEEITWFNQYHEKVYNCLNPELNNEEREWLKEVTSPLKR CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKSEIINRIASLRNFMRKHKLSAFIIPSTDPHSGEYIPKHWEARKWISGFTGSAGTVVVT CHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEE LDKAGLWTDSRYFLQAAEQLENTGITLFKERLPETPSIVEWLGCVLNAEDNVGIDGWVNS EECCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHH YQETSNLQKELEKKQIHLTLAPDPFNELWTDRPALPDNKVFIHELKYAGLSCKDKITQIR HHHHHHHHHHHHHCEEEEEECCCCHHHHHCCCCCCCCCCEEEEEHHHCCCCHHHHHHHHH EAIRRNSCTGILISALDEVAWTLNLRGSDVHCNPVFVSYLLITEYSSTLYIIENKLSDEV HHHHHCCCCHHHHHHHHHHEEEEEECCCCEECCHHHHHHHHHHCCCCEEEEEECHHHHHH KDYLTENEIKVRPYSTIEKDLKDFTGKLLLSANINAAVHAAACAHSLIKIAPSPVLFLKA HHHHCCCCEEECCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHH IKNETEIEGFHRAMKRDGVAMVKFLRWLKAAVSTGNETEISIDKKLYEFRAGQPHFNGIS HCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCCCCC FDTIAGYKAHGAIVHYEATPETDIPLKPEGMLLLDSGAQYLDGTTDITRTIVLGALTKEE CHHCCCEECCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCC KTDYTLVLKGFIQLSMAQFPHGTCGTQLDALARLPMWKAGINYLHGTGHGVGCFLNVHEG CCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHCCCEECCCCCCEEEEEEECCC PHQFRMNHMPALLVPGMTVTNEPGIYKTGRHGVRTENTMLIVPSQETEFGTYYKFEPLTL CHHHHHCCCCEEEECCEEECCCCCCEECCCCCCCCCCEEEEEECCCCCCCCEEEECCEEE CPIDKEAILTDMLSDEEITWFNQYHEKVYNCLNPELNNEEREWLKEVTSPLKR CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]