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The map label for this gene is yfcH [C]

Identifier: 148828357

GI number: 148828357

Start: 1803302

End: 1804192

Strand: Reverse

Name: yfcH [C]

Synonym: CGSHiGG_09765

Alternate gene names: 148828357

Gene position: 1804192-1803302 (Counterclockwise)

Preceding gene: 148828358

Following gene: 148828354

Centisome position: 95.6

GC content: 38.38

Gene sequence:

>891_bases
ATGAATATTCTATTAACGGGAGGAACAGGACTTATCGGCAAAGCACTTGTCGAACAACTCTGTTTACGCAATGAACAAGT
GACGATCTTAACGCGCTCAAGTTCGCCGCACACTCTCTCAAAGCACAAAAACATCAAATTTATTACCGCACTTTCCCAAC
TTAATTCACAAGAACAGTTTGATGCCATCATCAATCTTGCTGGCGAGCCAATTTTTCATAAAGTTTGGTCGAAAAACCAG
AAATCTATTTTACGAGAAAGTCGTTTAAGCCTCACTACTCAACTGGTTGAATTCATCAATCAGTATCAGCAATACCCAAT
TTTTATTTCAGGTTCAGCAACAGGAATTTACGGCGATCAAGACGAACAAAAAATTACCGAAACAAGCAAAACAGCAAAAA
CCTTCACTGCACAATTATGCCAAGATTGGGAAAATATTGCACGACAAGCACATGCTAGAGTTTGTTTGATTAGAACAGGC
ATGGTCTTTTCTACAAAAGGTGGCGCACTTGCTAAAATGTTGCCTTTATACAAATGGGGACTTGGCGGTAAACTGGGCAA
GGGAGAGCAATATTTCCCTTGGATTGCTTTGGAAGATATGGTAAACGGCATTTTATTTTTACTCGATCATTCAGAATGCA
GAGGGGCGTTTAACTTCGCTGCCCCCAAGTCTATAAAACAGCATAAATTTAACCGCACTTTAGCTCAACTATTAAAACGT
CCTGCTTTTGCAACCATTCCAAAATGGCTATTACATTTCATTCTTGGCGAGCGAGCAAATCTATTACTCGAAAGTCAAAA
TGTTGTACCTGAAAAATTACTTAACGCTGGATTCCAATTTCAATATGCTGATTGCGAAAACTATCTAAAAGATATCCTAA
AAAACAAATAA

Upstream 100 bases:

>100_bases
CTATCGCAGGCGATGATACTATTTTTGTCACGCCCACAAACGATAAACCTATCGACGAATTATTGCAAAATATCCAACGT
TTATTTGAAAACACATTGTA

Downstream 100 bases:

>100_bases
AAAAATCACCGCACTTTTAATACGATGATTTTTATCCCTCTAAATGCCTAGCATTTATTGTTCATTGTAAATTTCAAGAT
TGGATGCTTGTTTTTCTCGT

Product: amidophosphoribosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MNILLTGGTGLIGKALVEQLCLRNEQVTILTRSSSPHTLSKHKNIKFITALSQLNSQEQFDAIINLAGEPIFHKVWSKNQ
KSILRESRLSLTTQLVEFINQYQQYPIFISGSATGIYGDQDEQKITETSKTAKTFTAQLCQDWENIARQAHARVCLIRTG
MVFSTKGGALAKMLPLYKWGLGGKLGKGEQYFPWIALEDMVNGILFLLDHSECRGAFNFAAPKSIKQHKFNRTLAQLLKR
PAFATIPKWLLHFILGERANLLLESQNVVPEKLLNAGFQFQYADCENYLKDILKNK

Sequences:

>Translated_296_residues
MNILLTGGTGLIGKALVEQLCLRNEQVTILTRSSSPHTLSKHKNIKFITALSQLNSQEQFDAIINLAGEPIFHKVWSKNQ
KSILRESRLSLTTQLVEFINQYQQYPIFISGSATGIYGDQDEQKITETSKTAKTFTAQLCQDWENIARQAHARVCLIRTG
MVFSTKGGALAKMLPLYKWGLGGKLGKGEQYFPWIALEDMVNGILFLLDHSECRGAFNFAAPKSIKQHKFNRTLAQLLKR
PAFATIPKWLLHFILGERANLLLESQNVVPEKLLNAGFQFQYADCENYLKDILKNK
>Mature_296_residues
MNILLTGGTGLIGKALVEQLCLRNEQVTILTRSSSPHTLSKHKNIKFITALSQLNSQEQFDAIINLAGEPIFHKVWSKNQ
KSILRESRLSLTTQLVEFINQYQQYPIFISGSATGIYGDQDEQKITETSKTAKTFTAQLCQDWENIARQAHARVCLIRTG
MVFSTKGGALAKMLPLYKWGLGGKLGKGEQYFPWIALEDMVNGILFLLDHSECRGAFNFAAPKSIKQHKFNRTLAQLLKR
PAFATIPKWLLHFILGERANLLLESQNVVPEKLLNAGFQFQYADCENYLKDILKNK

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=302, Percent_Identity=32.4503311258278, Blast_Score=149, Evalue=3e-36,
Organism=Escherichia coli, GI1788642, Length=298, Percent_Identity=42.2818791946309, Blast_Score=248, Evalue=4e-67,
Organism=Drosophila melanogaster, GI28573846, Length=296, Percent_Identity=26.6891891891892, Blast_Score=125, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33418; Mature: 33418

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILLTGGTGLIGKALVEQLCLRNEQVTILTRSSSPHTLSKHKNIKFITALSQLNSQEQF
CEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHCCCCHHHHHHHHHCCHHHH
DAIINLAGEPIFHKVWSKNQKSILRESRLSLTTQLVEFINQYQQYPIFISGSATGIYGDQ
HHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC
DEQKITETSKTAKTFTAQLCQDWENIARQAHARVCLIRTGMVFSTKGGALAKMLPLYKWG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECEEEECCCCHHHHHHHHHHCC
LGGKLGKGEQYFPWIALEDMVNGILFLLDHSECRGAFNFAAPKSIKQHKFNRTLAQLLKR
CCCCCCCCCCCCCCEEHHHHHHHHEEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC
PAFATIPKWLLHFILGERANLLLESQNVVPEKLLNAGFQFQYADCENYLKDILKNK
CCHHHHHHHHHHHHHCCHHHEEEECCCCCHHHHHCCCCEEEEHHHHHHHHHHHCCC
>Mature Secondary Structure
MNILLTGGTGLIGKALVEQLCLRNEQVTILTRSSSPHTLSKHKNIKFITALSQLNSQEQF
CEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHCCCCHHHHHHHHHCCHHHH
DAIINLAGEPIFHKVWSKNQKSILRESRLSLTTQLVEFINQYQQYPIFISGSATGIYGDQ
HHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC
DEQKITETSKTAKTFTAQLCQDWENIARQAHARVCLIRTGMVFSTKGGALAKMLPLYKWG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECEEEECCCCHHHHHHHHHHCC
LGGKLGKGEQYFPWIALEDMVNGILFLLDHSECRGAFNFAAPKSIKQHKFNRTLAQLLKR
CCCCCCCCCCCCCCEEHHHHHHHHEEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC
PAFATIPKWLLHFILGERANLLLESQNVVPEKLLNAGFQFQYADCENYLKDILKNK
CCHHHHHHHHHHHHHCCHHHEEEECCCCCHHHHHCCCCEEEEHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]