Click here to switch to the map view.

The map label for this gene is yrbC [C]

Identifier: 148828246

GI number: 148828246

Start: 1678935

End: 1679579

Strand: Reverse

Name: yrbC [C]

Synonym: CGSHiGG_09060

Alternate gene names: 148828246

Gene position: 1679579-1678935 (Counterclockwise)

Preceding gene: 148828247

Following gene: 148828245

Centisome position: 89.0

GC content: 31.32

Gene sequence:

>645_bases
ATGAACCTTACTCAACTAAAAAAATGGTTTACTATTTTAACTTTCGTATTAACCGCACTTTTGGTTACACGAACAGCTAT
TGCAGAAACAAGTCCTTATGTTTTAATGCAGCAAGCATCAGATAAACTATTTTCTGATATACAAGCTAATCAAAGTAAAA
TTAAACAAGATCCAAATTATTTACGTACTATTGTTCGTAATGATTTATTGCCTTATGTAAACTTAGAATATGCAGGTTCT
AAAGTATTAGGTTCATACTACAAATCAACCTCTACAGAACAACGAGAAAAATTTTTCAAGACTTTTGGTGAATTGATTGA
GCAAAAGTACGCACAAACATTAACAAATTATTCTAATCAAAAAATTCAAATTGAATCAGAAAAAGAATTAGGCGATAACA
ATTTTGTAAATATTCGCGTAAGTATTATTCAAACTAATGGCGTTGCTCCGATCCTATTAGATTTTAAATGGCGTAAAGGC
AATAAAAGTGGGGAATGGAAAGCCTACGATATGGCAGCAGCTGGCGTAAGTATGCTGGAAGATACGATAAAAAATTGGGT
TGGTATTTTAAACAAACAAGGTATTGATACATTAATCACAAAGATGCAGCAATCTGCCTCACAACCTATAATTTTCAATC
AATAA

Upstream 100 bases:

>100_bases
TAATTGGGCAATTCTTATACGGAAGTAAAAAATCAGACGGCAATGAAAAATCAGAATCCGCAGAATAATAGGTTAAATTT
TATAAATTAGGAGATTGATA

Downstream 100 bases:

>100_bases
ATGAATAACTATGCTAAATTGGGATTTGCAAAAAAATAATGATAAAATAACGCTCTTTTTGTTTGGGGAACTATCTCGCA
GCACCTTGTTACCAATGTGG

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MNLTQLKKWFTILTFVLTALLVTRTAIAETSPYVLMQQASDKLFSDIQANQSKIKQDPNYLRTIVRNDLLPYVNLEYAGS
KVLGSYYKSTSTEQREKFFKTFGELIEQKYAQTLTNYSNQKIQIESEKELGDNNFVNIRVSIIQTNGVAPILLDFKWRKG
NKSGEWKAYDMAAAGVSMLEDTIKNWVGILNKQGIDTLITKMQQSASQPIIFNQ

Sequences:

>Translated_214_residues
MNLTQLKKWFTILTFVLTALLVTRTAIAETSPYVLMQQASDKLFSDIQANQSKIKQDPNYLRTIVRNDLLPYVNLEYAGS
KVLGSYYKSTSTEQREKFFKTFGELIEQKYAQTLTNYSNQKIQIESEKELGDNNFVNIRVSIIQTNGVAPILLDFKWRKG
NKSGEWKAYDMAAAGVSMLEDTIKNWVGILNKQGIDTLITKMQQSASQPIIFNQ
>Mature_214_residues
MNLTQLKKWFTILTFVLTALLVTRTAIAETSPYVLMQQASDKLFSDIQANQSKIKQDPNYLRTIVRNDLLPYVNLEYAGS
KVLGSYYKSTSTEQREKFFKTFGELIEQKYAQTLTNYSNQKIQIESEKELGDNNFVNIRVSIIQTNGVAPILLDFKWRKG
NKSGEWKAYDMAAAGVSMLEDTIKNWVGILNKQGIDTLITKMQQSASQPIIFNQ

Specific function: Unknown

COG id: COG2854

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaC/ttg2D family [H]

Homologues:

Organism=Escherichia coli, GI1789583, Length=207, Percent_Identity=42.9951690821256, Blast_Score=186, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023094
- InterPro:   IPR008869 [H]

Pfam domain/function: PF05494 Tol_Tol_Ttg2 [H]

EC number: NA

Molecular weight: Translated: 24439; Mature: 24439

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTQLKKWFTILTFVLTALLVTRTAIAETSPYVLMQQASDKLFSDIQANQSKIKQDPNY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LRTIVRNDLLPYVNLEYAGSKVLGSYYKSTSTEQREKFFKTFGELIEQKYAQTLTNYSNQ
HHHHHHHCCCCCEEEHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KIQIESEKELGDNNFVNIRVSIIQTNGVAPILLDFKWRKGNKSGEWKAYDMAAAGVSMLE
EEEEECHHHCCCCCEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
DTIKNWVGILNKQGIDTLITKMQQSASQPIIFNQ
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNLTQLKKWFTILTFVLTALLVTRTAIAETSPYVLMQQASDKLFSDIQANQSKIKQDPNY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LRTIVRNDLLPYVNLEYAGSKVLGSYYKSTSTEQREKFFKTFGELIEQKYAQTLTNYSNQ
HHHHHHHCCCCCEEEHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KIQIESEKELGDNNFVNIRVSIIQTNGVAPILLDFKWRKGNKSGEWKAYDMAAAGVSMLE
EEEEECHHHCCCCCEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
DTIKNWVGILNKQGIDTLITKMQQSASQPIIFNQ
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]