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The map label for this gene is yafJ [C]

Identifier: 148828203

GI number: 148828203

Start: 1630681

End: 1631517

Strand: Reverse

Name: yafJ [C]

Synonym: CGSHiGG_08805

Alternate gene names: 148828203

Gene position: 1631517-1630681 (Counterclockwise)

Preceding gene: 148828206

Following gene: 148828197

Centisome position: 86.45

GC content: 35.13

Gene sequence:

>837_bases
ATGTGTCAATTACTCGGAATGAATTGTAATACGCCAACGGATATTGTTTTTTCTTTTGAAGGTTTCCGTCGTCGTGCAGG
TTTAACAGATTGCCATTCAGATGGCTTTGGAATCGCGTTTTTTGAAGGACGTGGTGTACGTATTTTTCGTGATAATCAAG
CAGCCAGTCTTTCCCCCATCGCAGATTGTATAAAACAATATAATATTAAATCTCTTAATGTTATTGCGCATATTCGTAAA
GCAACACAAGGCGAAGTCAATATTGAAAACACCCATCCGTTCATTCGTGAAATTTGGGGACAAAACTGGGTTTTTGCGCA
TAATGGTAATTTAAAAAACTTACCAGATATGACAGATCATTTTTTACAGCCAATAGGTTCTACAGATTCTGAAGCTGCTT
TCTGTTATATGGCTGAATATCTTAAAAATACTTTCCACAAAAAACCAAGTGAAATGGAAATTTTTGAAGCAATTCAAAAA
GTAACAAAAGAACTTGCTCAACACGGTACGTTTAATTTCATTCTTTCTAATGGCGAGTGGATGATTGCACATTGCTCAAC
AAACTTACATTATGTTATGCGAAAAGCACCTTTTGGCAAAGCTCACCGTATTGATGATGATGGAGTAATTGATTTTAGCT
ATTATGCAAAAGCAGGAGATAAGGTCAATATCATCACAACATTTCCTTTAACCAAAAATGAATCTTGGACAAAAATGGAA
AATGGTGGATTTGTGTTTTTTAAAAATGGAGAGAAAATCGCCGAAGTTATTGGGACGCCAAAAGAAGCGATTGATGATGG
TACTTTAGGTAATAGGAGAATAAATTCTGCTATTTAA

Upstream 100 bases:

>100_bases
ATATCTATACAACATAAAAATTCATTAAATCTCTCTTGATATTCTCCCTATAATGGTGTTAAATCGCTCACATATTGTGA
GGTTATATCTAATTAAAGTT

Downstream 100 bases:

>100_bases
ATGTCAATGTAAATAAACTTCCCCTTATTCTTATAAAAGAATTTTATATCTTTTATAAGAATTATAAAAATCAAAAACCT
CTAAAAACGAAATAAAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MCQLLGMNCNTPTDIVFSFEGFRRRAGLTDCHSDGFGIAFFEGRGVRIFRDNQAASLSPIADCIKQYNIKSLNVIAHIRK
ATQGEVNIENTHPFIREIWGQNWVFAHNGNLKNLPDMTDHFLQPIGSTDSEAAFCYMAEYLKNTFHKKPSEMEIFEAIQK
VTKELAQHGTFNFILSNGEWMIAHCSTNLHYVMRKAPFGKAHRIDDDGVIDFSYYAKAGDKVNIITTFPLTKNESWTKME
NGGFVFFKNGEKIAEVIGTPKEAIDDGTLGNRRINSAI

Sequences:

>Translated_278_residues
MCQLLGMNCNTPTDIVFSFEGFRRRAGLTDCHSDGFGIAFFEGRGVRIFRDNQAASLSPIADCIKQYNIKSLNVIAHIRK
ATQGEVNIENTHPFIREIWGQNWVFAHNGNLKNLPDMTDHFLQPIGSTDSEAAFCYMAEYLKNTFHKKPSEMEIFEAIQK
VTKELAQHGTFNFILSNGEWMIAHCSTNLHYVMRKAPFGKAHRIDDDGVIDFSYYAKAGDKVNIITTFPLTKNESWTKME
NGGFVFFKNGEKIAEVIGTPKEAIDDGTLGNRRINSAI
>Mature_278_residues
MCQLLGMNCNTPTDIVFSFEGFRRRAGLTDCHSDGFGIAFFEGRGVRIFRDNQAASLSPIADCIKQYNIKSLNVIAHIRK
ATQGEVNIENTHPFIREIWGQNWVFAHNGNLKNLPDMTDHFLQPIGSTDSEAAFCYMAEYLKNTFHKKPSEMEIFEAIQK
VTKELAQHGTFNFILSNGEWMIAHCSTNLHYVMRKAPFGKAHRIDDDGVIDFSYYAKAGDKVNIITTFPLTKNESWTKME
NGGFVFFKNGEKIAEVIGTPKEAIDDGTLGNRRINSAI

Specific function: Unknown

COG id: COG0121

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786417, Length=255, Percent_Identity=47.843137254902, Blast_Score=264, Evalue=6e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005854
- InterPro:   IPR000583
- InterPro:   IPR017932 [H]

Pfam domain/function: PF00310 GATase_2 [H]

EC number: NA

Molecular weight: Translated: 31373; Mature: 31373

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQLLGMNCNTPTDIVFSFEGFRRRAGLTDCHSDGFGIAFFEGRGVRIFRDNQAASLSPI
CCEEEECCCCCCCEEEEECCHHHHHCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCHHH
ADCIKQYNIKSLNVIAHIRKATQGEVNIENTHPFIREIWGQNWVFAHNGNLKNLPDMTDH
HHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCEEEEECCCCCCCCCHHHH
FLQPIGSTDSEAAFCYMAEYLKNTFHKKPSEMEIFEAIQKVTKELAQHGTFNFILSNGEW
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCE
MIAHCSTNLHYVMRKAPFGKAHRIDDDGVIDFSYYAKAGDKVNIITTFPLTKNESWTKME
EEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEHECCCCCEEEEEEECCCCCCCCCCEEC
NGGFVFFKNGEKIAEVIGTPKEAIDDGTLGNRRINSAI
CCCEEEEECCHHHHHHHCCCHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MCQLLGMNCNTPTDIVFSFEGFRRRAGLTDCHSDGFGIAFFEGRGVRIFRDNQAASLSPI
CCEEEECCCCCCCEEEEECCHHHHHCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCHHH
ADCIKQYNIKSLNVIAHIRKATQGEVNIENTHPFIREIWGQNWVFAHNGNLKNLPDMTDH
HHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCEEEEECCCCCCCCCHHHH
FLQPIGSTDSEAAFCYMAEYLKNTFHKKPSEMEIFEAIQKVTKELAQHGTFNFILSNGEW
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCE
MIAHCSTNLHYVMRKAPFGKAHRIDDDGVIDFSYYAKAGDKVNIITTFPLTKNESWTKME
EEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEHECCCCCEEEEEEECCCCCCCCCCEEC
NGGFVFFKNGEKIAEVIGTPKEAIDDGTLGNRRINSAI
CCCEEEEECCHHHHHHHCCCHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]