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The map label for this gene is tadA [H]

Identifier: 148828084

GI number: 148828084

Start: 1491538

End: 1491915

Strand: Direct

Name: tadA [H]

Synonym: CGSHiGG_08090

Alternate gene names: 148828084

Gene position: 1491538-1491915 (Clockwise)

Preceding gene: 148828083

Following gene: 148828086

Centisome position: 79.03

GC content: 43.92

Gene sequence:

>378_bases
ATGGATGCAGCAAAAGTGCGGTCAGAATTTGACGAGAAAATGATGCGCTACGCCCTTGAGCTTGCCGATAAAGCGGAAGC
GTTAGGTGAGATTCCTGTGGGGGCGGTGCTGGTGGATGACGCTAGAAATATTATTGGAGAAGGTTGGAATCTCTCCATTG
TTCAAAGTGATCCTACTGCACATGCTGAAATTATTGCTTTGCGTAATGGCGCGAAAAATATTCAAAATTATCGCCTACTG
AATAGCACGCTTTATGTGACATTAGAGCCTTGCACAATGTGCGCAGGGGCAATTTTGCATAGCCGTATTAAACGTCTTGT
GTTCGGTGCATCTGATTATAAAACTGGCGCGATTGGATCACGTTTTCTATTTTTTTGA

Upstream 100 bases:

>100_bases
TAAAAACCCTTGAAGATTTAGAAACTTGGGTCACGATGGATGATTTTAAAGTCGTTGGCTATCAATCTCATGAGCCGATT
AAATATCCTTTTTCCGTCTA

Downstream 100 bases:

>100_bases
TGATTACAAGATGAATCATACTTTAGAGATTACATCTGGCGTATTGGCAGAAGAGTGTAGTCAAAAATTGAGTACATTTT
TTCAGAAAAGACGCGAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MDAAKVRSEFDEKMMRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNIQNYRLL
NSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFLFF

Sequences:

>Translated_125_residues
MDAAKVRSEFDEKMMRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNIQNYRLL
NSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFLFF
>Mature_125_residues
MDAAKVRSEFDEKMMRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNIQNYRLL
NSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFLFF

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=125, Percent_Identity=32.8, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI145693172, Length=109, Percent_Identity=65.1376146788991, Blast_Score=144, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17554608, Length=108, Percent_Identity=42.5925925925926, Blast_Score=91, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17555996, Length=88, Percent_Identity=36.3636363636364, Blast_Score=74, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17541138, Length=117, Percent_Identity=36.7521367521368, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6325319, Length=105, Percent_Identity=34.2857142857143, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 13750; Mature: 13750

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAAKVRSEFDEKMMRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHCCCCCEEEEECCCCC
HAEIIALRNGAKNIQNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGS
CEEEEEECCCCHHHHHEEEECCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RFLFF
CCCCC
>Mature Secondary Structure
MDAAKVRSEFDEKMMRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHCCCCCEEEEECCCCC
HAEIIALRNGAKNIQNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGS
CEEEEEECCCCHHHHHEEEECCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RFLFF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]