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The map label for this gene is asnC

Identifier: 148827755

GI number: 148827755

Start: 1107845

End: 1108297

Strand: Reverse

Name: asnC

Synonym: CGSHiGG_06090

Alternate gene names: 148827755

Gene position: 1108297-1107845 (Counterclockwise)

Preceding gene: 148827757

Following gene: 148827753

Centisome position: 58.73

GC content: 34.22

Gene sequence:

>453_bases
ATGCACAACATTGATAGTTTAGATCAAAAAATATTACGTGTACTCACTAAAGATGCGAGAACACCATACGCAGAAATGGC
TAAAAATTTTGGTGTTAGTCCAGGAACGATTCACGTTCGGGTCGAAAAAATGCGTCAATCGGGCATTATTAAAGGCACAA
AAGTAATTATTGATGAACGTAAATTAGGCTATGATGTATGTTGTTTTATCGGCATTATTCTAAAAAGCGCAAAAGATTAT
GAAAAAGTGATCAAAAAGCTAGAAAGTTTTGATGAAGTAGTCGAGGCCTATTATACAACAGGCAATTACTCGATTTTCTT
AAAGGTGATGACACACACAATTGCAGAATTACATTCCGTTTTGGCGACCAAGATTCAGTTAATTGATGAAATTCAATCCA
CTGAAACCTTGATTTCAATGCAAAATCCAATTTTGCGAGATATTAAACCTTAA

Upstream 100 bases:

>100_bases
AATGATTTTATTTCAAGTATTTTATTTACTTTCTTTTCTTGGTTGAATATTATCTAATTCATTGTGAAAAAATTAAATAA
AATCTAAAGGAGGAAGTTTT

Downstream 100 bases:

>100_bases
GAACATAGAAAGTGCGGTGAAATTTTTATTCAAATTTATCTTGGTGTTTAAATTTCAATAAATCTCTCCGCTCTTTTTTG
TTTGGGCGACGATCAGGATG

Product: DNA-binding transcriptional regulator AsnC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MHNIDSLDQKILRVLTKDARTPYAEMAKNFGVSPGTIHVRVEKMRQSGIIKGTKVIIDERKLGYDVCCFIGIILKSAKDY
EKVIKKLESFDEVVEAYYTTGNYSIFLKVMTHTIAELHSVLATKIQLIDEIQSTETLISMQNPILRDIKP

Sequences:

>Translated_150_residues
MHNIDSLDQKILRVLTKDARTPYAEMAKNFGVSPGTIHVRVEKMRQSGIIKGTKVIIDERKLGYDVCCFIGIILKSAKDY
EKVIKKLESFDEVVEAYYTTGNYSIFLKVMTHTIAELHSVLATKIQLIDEIQSTETLISMQNPILRDIKP
>Mature_150_residues
MHNIDSLDQKILRVLTKDARTPYAEMAKNFGVSPGTIHVRVEKMRQSGIIKGTKVIIDERKLGYDVCCFIGIILKSAKDY
EKVIKKLESFDEVVEAYYTTGNYSIFLKVMTHTIAELHSVLATKIQLIDEIQSTETLISMQNPILRDIKP

Specific function: Activator of asnA transcription

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain

Homologues:

Organism=Escherichia coli, GI1790182, Length=147, Percent_Identity=68.0272108843537, Blast_Score=207, Evalue=3e-55,
Organism=Escherichia coli, GI1787116, Length=141, Percent_Identity=24.113475177305, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ASNC_HAEIN (P44337)

Other databases:

- EMBL:   L42023
- PIR:   G64077
- RefSeq:   NP_438720.1
- ProteinModelPortal:   P44337
- SMR:   P44337
- GeneID:   950765
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0563
- TIGR:   HI_0563
- HOGENOM:   HBG740878
- OMA:   SIEELQY
- ProtClustDB:   PRK11179
- BioCyc:   HINF71421:HI_0563-MONOMER
- GO:   GO:0005622
- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- PRINTS:   PR00033
- SMART:   SM00344

Pfam domain/function: PF01037 AsnC_trans_reg; SSF54909 Dimer_A_B_barrel

EC number: NA

Molecular weight: Translated: 17060; Mature: 17060

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS00519 HTH_ASNC_1; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNIDSLDQKILRVLTKDARTPYAEMAKNFGVSPGTIHVRVEKMRQSGIIKGTKVIIDER
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEHHHHHHCCCCCCHHEEEECC
KLGYDVCCFIGIILKSAKDYEKVIKKLESFDEVVEAYYTTGNYSIFLKVMTHTIAELHSV
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LATKIQLIDEIQSTETLISMQNPILRDIKP
HHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
>Mature Secondary Structure
MHNIDSLDQKILRVLTKDARTPYAEMAKNFGVSPGTIHVRVEKMRQSGIIKGTKVIIDER
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEHHHHHHCCCCCCHHEEEECC
KLGYDVCCFIGIILKSAKDYEKVIKKLESFDEVVEAYYTTGNYSIFLKVMTHTIAELHSV
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LATKIQLIDEIQSTETLISMQNPILRDIKP
HHHHHHHHHHHHHHHHHHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800