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The map label for this gene is glnB

Identifier: 148827484

GI number: 148827484

Start: 842574

End: 842912

Strand: Direct

Name: glnB

Synonym: CGSHiGG_04485

Alternate gene names: 148827484

Gene position: 842574-842912 (Clockwise)

Preceding gene: 148827483

Following gene: 148827485

Centisome position: 44.65

GC content: 40.41

Gene sequence:

>339_bases
ATGAAAAAAATCGAAGCAATGATTAAACCCTTTAAATTAGACGATGTGCGAGAAAGTCTTTCAGATATTGGTATTTCAGG
TATGACAATCACGGAAGTACGCGGATTTGGTCGTCAAAAAGGTCATACAGAACTTTATCGTGGTGCGGAATATATGGTGG
ATTTTCTGCCGAAAGTGAAATTGGAAGTAGTGGTTCCTGATGAACTTGTGGATCAATGTATTGAAGCGATTATTGAAACG
GCACAAACAGGAAAAATCGGTGACGGCAAAATTTTTGTTTATCACGTTGAGAGAGCGATCCGCATTCGCACGGGCGAAGA
AAACGAGGATGCGATTTAG

Upstream 100 bases:

>100_bases
TGTTTGCAACTGATTAACGGCTTATATATTGATACCAAGCCTGAAATCATCGAAAGTTTCCGTCCTAAATCTGCAAGACG
CGAAAATCTGGAGAAATAGC

Downstream 100 bases:

>100_bases
TGCAAAATAATTTAAATTTACACCGCACTTTGCTTGGCATTGCTGCAGTGATTATTATCTTAGCTGGCGTAAAATTGGCG
GCAGAAATCGTGGTGCCATT

Product: nitrogen regulatory protein P-II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MKKIEAMIKPFKLDDVRESLSDIGISGMTITEVRGFGRQKGHTELYRGAEYMVDFLPKVKLEVVVPDELVDQCIEAIIET
AQTGKIGDGKIFVYHVERAIRIRTGEENEDAI

Sequences:

>Translated_112_residues
MKKIEAMIKPFKLDDVRESLSDIGISGMTITEVRGFGRQKGHTELYRGAEYMVDFLPKVKLEVVVPDELVDQCIEAIIET
AQTGKIGDGKIFVYHVERAIRIRTGEENEDAI
>Mature_112_residues
MKKIEAMIKPFKLDDVRESLSDIGISGMTITEVRGFGRQKGHTELYRGAEYMVDFLPKVKLEVVVPDELVDQCIEAIIET
AQTGKIGDGKIFVYHVERAIRIRTGEENEDAI

Specific function: P-II indirectly controls the transcription of the glutamine synthetase gene (glnA). P-II prevents NR-II-catalyzed conversion of NR-I to NR-I-phosphate, the transcriptional activator of glnA. When P-II is uridylylated to P-II-UMP, these events are reversed

COG id: COG0347

COG function: function code E; Nitrogen regulatory protein PII

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the P(II) protein family

Homologues:

Organism=Escherichia coli, GI1788904, Length=112, Percent_Identity=77.6785714285714, Blast_Score=187, Evalue=1e-49,
Organism=Escherichia coli, GI1786655, Length=112, Percent_Identity=63.3928571428571, Blast_Score=152, Evalue=4e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLNB_HAEIN (P43795)

Other databases:

- EMBL:   L42023
- PIR:   F64062
- RefSeq:   NP_438501.1
- ProteinModelPortal:   P43795
- SMR:   P43795
- GeneID:   949445
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0337
- NMPDR:   fig|71421.1.peg.316
- TIGR:   HI_0337
- HOGENOM:   HBG748089
- OMA:   KMEIIVG
- ProtClustDB:   CLSK870695
- BioCyc:   HINF71421:HI_0337-MONOMER
- GO:   GO:0006350
- InterPro:   IPR002187
- InterPro:   IPR011322
- InterPro:   IPR015867
- InterPro:   IPR017918
- InterPro:   IPR002332
- Gene3D:   G3DSA:3.30.70.120
- PRINTS:   PR00340
- SMART:   SM00938

Pfam domain/function: PF00543 P-II; SSF54913 N-reg_PII-like_a/b

EC number: NA

Molecular weight: Translated: 12641; Mature: 12641

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS00638 PII_GLNB_CTER; PS51343 PII_GLNB_DOM; PS00496 PII_GLNB_UMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIEAMIKPFKLDDVRESLSDIGISGMTITEVRGFGRQKGHTELYRGAEYMVDFLPKVK
CCCHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCE
LEVVVPDELVDQCIEAIIETAQTGKIGDGKIFVYHVERAIRIRTGEENEDAI
EEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECEEEEEECCCCCCCCC
>Mature Secondary Structure
MKKIEAMIKPFKLDDVRESLSDIGISGMTITEVRGFGRQKGHTELYRGAEYMVDFLPKVK
CCCHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCE
LEVVVPDELVDQCIEAIIETAQTGKIGDGKIFVYHVERAIRIRTGEENEDAI
EEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800