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The map label for this gene is yebC [C]

Identifier: 148827467

GI number: 148827467

Start: 825151

End: 825891

Strand: Reverse

Name: yebC [C]

Synonym: CGSHiGG_04390

Alternate gene names: 148827467

Gene position: 825891-825151 (Counterclockwise)

Preceding gene: 148827468

Following gene: 148827466

Centisome position: 43.76

GC content: 41.43

Gene sequence:

>741_bases
ATGGCAGGTCATAGTAAGTGGGCTAATATTAAACACCGCAAAGCAGCACAAGATGCACAACGCGGTAAAATTTTTACTAA
ATTAATTCGTGAACTTGTTACCGCAGCTAAAATTGGTGGTGGCGATGTGAGTGCTAACCCGCGTTTACGTGCTGCAGTAG
ATAAAGCACTTAGCAACAATATGACGCGCGATACTATCAACCGTGCTATTGATCGTGGCGTAGGTGGTGGCGATGACACC
AATATGGAAACCAAAATCTATGAAGGTTATGGTCCAGGTGGTACAGCGGTTATGGTGGAATGTTTAAGTGATAATGCAAA
CCGTACGATCTCACAAGTGCGCCCAAGTTTTACTAAATGTGGTGGTAACTTGGGAACAGAAGGTTCTGTGGGTTATTTAT
TTAGCAAAAAAGGTTTAATCTTAATCGCAGAAGCGGATGAAGATGCCTTAACTGAAGCGGCAATCGAAGCGGGTGCTGAT
GATATTCAACCACAAGATGATGGTTCATTTGAGATCTATACTGCTTGGGAAGATTTAGGTTCAGTACGCGATGGCATTGA
AGCAGCTGGTTTTAAAGTACAAGAAGCTGAAGTAACGATGATTCCATCAACAACCGTTGATCTTGATATTGAAACTGCAC
CAAAATTACTTCGTTTAATTGATATGTTGGAAGATTGTGATGACGTACAAAACGTATATCACAACGGAGAAATCTGTGAC
GAAGTGGCATCTCAACTTTAA

Upstream 100 bases:

>100_bases
CCCAACGGGGTAACACTTTTACTAACCTAGGCTATACCTAGCCTAGGTCAAAACGTTTAATTAAATCAAGATCAATAAGA
TCAAAACAGAAGGAAATAAA

Downstream 100 bases:

>100_bases
TAATGCAATAAATGGGTAATTTAATTACCCATTTTTTATAGAAATTATGAGCATTATTTTAGGTATTGACCCTGGATCTC
GCGTAACGGGTTACGGTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MAGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGGDVSANPRLRAAVDKALSNNMTRDTINRAIDRGVGGGDDT
NMETKIYEGYGPGGTAVMVECLSDNANRTISQVRPSFTKCGGNLGTEGSVGYLFSKKGLILIAEADEDALTEAAIEAGAD
DIQPQDDGSFEIYTAWEDLGSVRDGIEAAGFKVQEAEVTMIPSTTVDLDIETAPKLLRLIDMLEDCDDVQNVYHNGEICD
EVASQL

Sequences:

>Translated_246_residues
MAGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGGDVSANPRLRAAVDKALSNNMTRDTINRAIDRGVGGGDDT
NMETKIYEGYGPGGTAVMVECLSDNANRTISQVRPSFTKCGGNLGTEGSVGYLFSKKGLILIAEADEDALTEAAIEAGAD
DIQPQDDGSFEIYTAWEDLGSVRDGIEAAGFKVQEAEVTMIPSTTVDLDIETAPKLLRLIDMLEDCDDVQNVYHNGEICD
EVASQL
>Mature_245_residues
AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGGDVSANPRLRAAVDKALSNNMTRDTINRAIDRGVGGGDDTN
METKIYEGYGPGGTAVMVECLSDNANRTISQVRPSFTKCGGNLGTEGSVGYLFSKKGLILIAEADEDALTEAAIEAGADD
IQPQDDGSFEIYTAWEDLGSVRDGIEAAGFKVQEAEVTMIPSTTVDLDIETAPKLLRLIDMLEDCDDVQNVYHNGEICDE
VASQL

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=251, Percent_Identity=31.4741035856574, Blast_Score=111, Evalue=7e-25,
Organism=Escherichia coli, GI1788171, Length=246, Percent_Identity=75.2032520325203, Blast_Score=398, Evalue=1e-112,
Organism=Escherichia coli, GI1788294, Length=233, Percent_Identity=39.4849785407725, Blast_Score=158, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI17556100, Length=243, Percent_Identity=24.6913580246914, Blast_Score=78, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=32.5757575757576, Blast_Score=125, Evalue=4e-30,
Organism=Drosophila melanogaster, GI24583305, Length=251, Percent_Identity=31.0756972111554, Blast_Score=94, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 26384; Mature: 26253

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGGDVSANPRLRAAVDKALSNN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
MTRDTINRAIDRGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQVRPSFTKC
CCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHEEHHCCCHHHHHHHCHHHHHC
GGNLGTEGSVGYLFSKKGLILIAEADEDALTEAAIEAGADDIQPQDDGSFEIYTAWEDLG
CCCCCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHH
SVRDGIEAAGFKVQEAEVTMIPSTTVDLDIETAPKLLRLIDMLEDCDDVQNVYHNGEICD
HHHHHHHHCCCEEECCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
EVASQL
HHHHCC
>Mature Secondary Structure 
AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGGDVSANPRLRAAVDKALSNN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
MTRDTINRAIDRGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQVRPSFTKC
CCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHEEHHCCCHHHHHHHCHHHHHC
GGNLGTEGSVGYLFSKKGLILIAEADEDALTEAAIEAGADDIQPQDDGSFEIYTAWEDLG
CCCCCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHH
SVRDGIEAAGFKVQEAEVTMIPSTTVDLDIETAPKLLRLIDMLEDCDDVQNVYHNGEICD
HHHHHHHHCCCEEECCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
EVASQL
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA