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The map label for this gene is ybgL [C]

Identifier: 148827146

GI number: 148827146

Start: 428800

End: 429537

Strand: Reverse

Name: ybgL [C]

Synonym: CGSHiGG_02380

Alternate gene names: 148827146

Gene position: 429537-428800 (Counterclockwise)

Preceding gene: 148827147

Following gene: 148827145

Centisome position: 22.76

GC content: 39.43

Gene sequence:

>738_bases
ATGAAAAAAATTGATTTAAATGCAGATATTGCAGAGGGTTTTCCTTTTGATGAAAGTTTATTGCAGTTGCTTTCTTCTGC
AAATATTGCCTGTGGCTTACACGCTGGGGGTGCAAAGGAAATGCAAAGTGCGGTCAAATTTGCGAAAGAAAATAAGGTGC
GTATTGGCGCGCATCCTAGTTTTCCTGATCGCGAAAATTTTGGTCGTACGGCAATGGCGTTGTCTTCACAGGAATTAATC
GCACATTTGCGTTATCAATTGGGGGCATTAAAAGCGATTTGTGATGGCGAGGGGGCGGTAATTAGTTATGTTAAACCTCA
CGGTGCGTTATATAACCAAGCAGCAAAAGATGAAAAAATAGCACGTGTAATTGCACAAACTGTTTATCAATTTGATCCGC
ATTTGAAATTAATGGGGTTAGCAGGCAGTTTAATGTTGTGCATCGCAGAGGAAGAAAAATTGCAAACCATTTCTGAAGTT
TTTGCCGATCGACATTATATGCCTGATGGGAGCTTAGTACCTCGTTCTCAACCAAATGCAATGGTGGAATCTGATAAGGA
AGCCATTCAACAAGTGTTACAAATGGTAACAAAGGGGCAAGTCAATGCCATTGATGGAAGCCTTGTGCCTGTAAAAGCAG
AAAGTATTTGCTTACACGGCGATAATCAACATTCTTTACAATTTGCTAAACGCATTGTGGAAGAATTAGAAAAAAATCAT
ATCAAAATAACGGCATAA

Upstream 100 bases:

>100_bases
TTAGGTTCAACGATTAAATTTGAAGCGGTTAGTTTACAAGAGGCTGCTAAATTACGCCGTAAAAATGAAATATACCTTGA
TCAAATTAGGAGAATTGTTG

Downstream 100 bases:

>100_bases
GCCGAATAAACACATAACATCAACTTAACAATGGAGGTGCTTTATGGCATCAATTACTCACAGACGAAATGCGGTTTTAG
GGGCGGCTTTCTTAATGGCG

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKKIDLNADIAEGFPFDESLLQLLSSANIACGLHAGGAKEMQSAVKFAKENKVRIGAHPSFPDRENFGRTAMALSSQELI
AHLRYQLGALKAICDGEGAVISYVKPHGALYNQAAKDEKIARVIAQTVYQFDPHLKLMGLAGSLMLCIAEEEKLQTISEV
FADRHYMPDGSLVPRSQPNAMVESDKEAIQQVLQMVTKGQVNAIDGSLVPVKAESICLHGDNQHSLQFAKRIVEELEKNH
IKITA

Sequences:

>Translated_245_residues
MKKIDLNADIAEGFPFDESLLQLLSSANIACGLHAGGAKEMQSAVKFAKENKVRIGAHPSFPDRENFGRTAMALSSQELI
AHLRYQLGALKAICDGEGAVISYVKPHGALYNQAAKDEKIARVIAQTVYQFDPHLKLMGLAGSLMLCIAEEEKLQTISEV
FADRHYMPDGSLVPRSQPNAMVESDKEAIQQVLQMVTKGQVNAIDGSLVPVKAESICLHGDNQHSLQFAKRIVEELEKNH
IKITA
>Mature_245_residues
MKKIDLNADIAEGFPFDESLLQLLSSANIACGLHAGGAKEMQSAVKFAKENKVRIGAHPSFPDRENFGRTAMALSSQELI
AHLRYQLGALKAICDGEGAVISYVKPHGALYNQAAKDEKIARVIAQTVYQFDPHLKLMGLAGSLMLCIAEEEKLQTISEV
FADRHYMPDGSLVPRSQPNAMVESDKEAIQQVLQMVTKGQVNAIDGSLVPVKAESICLHGDNQHSLQFAKRIVEELEKNH
IKITA

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=243, Percent_Identity=52.2633744855967, Blast_Score=259, Evalue=1e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 26792; Mature: 26792

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIDLNADIAEGFPFDESLLQLLSSANIACGLHAGGAKEMQSAVKFAKENKVRIGAHPS
CCEECCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCEEECCCCC
FPDRENFGRTAMALSSQELIAHLRYQLGALKAICDGEGAVISYVKPHGALYNQAAKDEKI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHH
ARVIAQTVYQFDPHLKLMGLAGSLMLCIAEEEKLQTISEVFADRHYMPDGSLVPRSQPNA
HHHHHHHHHHCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
MVESDKEAIQQVLQMVTKGQVNAIDGSLVPVKAESICLHGDNQHSLQFAKRIVEELEKNH
HHHCHHHHHHHHHHHHHCCCCEECCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHHHCC
IKITA
EEEEC
>Mature Secondary Structure
MKKIDLNADIAEGFPFDESLLQLLSSANIACGLHAGGAKEMQSAVKFAKENKVRIGAHPS
CCEECCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCEEECCCCC
FPDRENFGRTAMALSSQELIAHLRYQLGALKAICDGEGAVISYVKPHGALYNQAAKDEKI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHH
ARVIAQTVYQFDPHLKLMGLAGSLMLCIAEEEKLQTISEVFADRHYMPDGSLVPRSQPNA
HHHHHHHHHHCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
MVESDKEAIQQVLQMVTKGQVNAIDGSLVPVKAESICLHGDNQHSLQFAKRIVEELEKNH
HHHCHHHHHHHHHHHHHCCCCEECCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHHHCC
IKITA
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]