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The map label for this gene is ybgJ [C]

Identifier: 148827147

GI number: 148827147

Start: 430449

End: 431090

Strand: Reverse

Name: ybgJ [C]

Synonym: CGSHiGG_02395

Alternate gene names: 148827147

Gene position: 431090-430449 (Counterclockwise)

Preceding gene: 148827148

Following gene: 148827146

Centisome position: 22.84

GC content: 43.61

Gene sequence:

>642_bases
ATGAATATCGTTCCGATCAGTGAATCGGCGGTGGTTTGCTCTTTGCCACCCCCAGCTTCCATTCAACAACAACGCCAATT
ATGGGCGTTTGCTCGTCAATTGCAATCAGAACAAGATATTGTAGAAGTTGTCTTGGGAATGAATAATCTTACGGTTTTTA
CCGATTTTTTCGTGGATTTTAAGCCGCTTGTGCAACGTCTAGAACAACTTTGGGCTGAGTTGAAAGTATCGGATTTTCAA
GGGCGTCATATTGAAATTCCTGTTATTTATGGGGGAGAGCGAGGTCAGGATTTATCTGATGTAGCGAAATTTCATCAGAC
AACACCAGAGCGGATTATTCAGATGCACAGTGAGCCTATTTATACTGTGTATATGATTGGCTTCCAAGCGGGTTTTCCTT
ATTTGGGTGGTTTACCTGAAAATTTACACACGCCGCGCCGCGCGTCGCCAAGAACGGTTGTTCCTTCTGGTTCTGTTGGT
ATTGGGGGGGCGCAAACGGGGATTTATCCTTTTTCTTCGCCAGGTGGGTGGCAGTTGATCGGTTATACTAAACAAGCACT
TTTTGATAAAAATCAAGCACAACCAACCTTATTACAAGCTGGCGATACTGTGAAATTTATTGTGGAGGGGATTGAACTAT
GA

Upstream 100 bases:

>100_bases
AAGATGAAAATAAAGACTTGACAAAATCTATAAATATCCTTTAAAAGAGAGCTGTAACAAAAAAATAACAAATCACATAA
CATCATATAAAGGGTATCTT

Downstream 100 bases:

>100_bases
TTGATATTCTTGATGTGAAATCCCGTGCGACCATTCAAGATTTAGGGCGTTTTGGTTTACGCCGATTTGGCATTAGCCAT
TGTGGGCAATGGATAAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MNIVPISESAVVCSLPPPASIQQQRQLWAFARQLQSEQDIVEVVLGMNNLTVFTDFFVDFKPLVQRLEQLWAELKVSDFQ
GRHIEIPVIYGGERGQDLSDVAKFHQTTPERIIQMHSEPIYTVYMIGFQAGFPYLGGLPENLHTPRRASPRTVVPSGSVG
IGGAQTGIYPFSSPGGWQLIGYTKQALFDKNQAQPTLLQAGDTVKFIVEGIEL

Sequences:

>Translated_213_residues
MNIVPISESAVVCSLPPPASIQQQRQLWAFARQLQSEQDIVEVVLGMNNLTVFTDFFVDFKPLVQRLEQLWAELKVSDFQ
GRHIEIPVIYGGERGQDLSDVAKFHQTTPERIIQMHSEPIYTVYMIGFQAGFPYLGGLPENLHTPRRASPRTVVPSGSVG
IGGAQTGIYPFSSPGGWQLIGYTKQALFDKNQAQPTLLQAGDTVKFIVEGIEL
>Mature_213_residues
MNIVPISESAVVCSLPPPASIQQQRQLWAFARQLQSEQDIVEVVLGMNNLTVFTDFFVDFKPLVQRLEQLWAELKVSDFQ
GRHIEIPVIYGGERGQDLSDVAKFHQTTPERIIQMHSEPIYTVYMIGFQAGFPYLGGLPENLHTPRRASPRTVVPSGSVG
IGGAQTGIYPFSSPGGWQLIGYTKQALFDKNQAQPTLLQAGDTVKFIVEGIEL

Specific function: Unknown

COG id: COG2049

COG function: function code E; Allophanate hydrolase subunit 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786929, Length=206, Percent_Identity=47.0873786407767, Blast_Score=203, Evalue=8e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003833
- InterPro:   IPR020899
- InterPro:   IPR010016
- InterPro:   IPR002130 [H]

Pfam domain/function: PF02682 AHS1 [H]

EC number: NA

Molecular weight: Translated: 23643; Mature: 23643

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVPISESAVVCSLPPPASIQQQRQLWAFARQLQSEQDIVEVVLGMNNLTVFTDFFVDF
CCEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEHHHHHHHH
KPLVQRLEQLWAELKVSDFQGRHIEIPVIYGGERGQDLSDVAKFHQTTPERIIQMHSEPI
HHHHHHHHHHHHHHECCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHCCCCE
YTVYMIGFQAGFPYLGGLPENLHTPRRASPRTVVPSGSVGIGGAQTGIYPFSSPGGWQLI
EEEEEEEECCCCCCCCCCCHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEE
GYTKQALFDKNQAQPTLLQAGDTVKFIVEGIEL
EEHHHHHHCCCCCCCCEEECCCHHEEHHHHCCC
>Mature Secondary Structure
MNIVPISESAVVCSLPPPASIQQQRQLWAFARQLQSEQDIVEVVLGMNNLTVFTDFFVDF
CCEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEHHHHHHHH
KPLVQRLEQLWAELKVSDFQGRHIEIPVIYGGERGQDLSDVAKFHQTTPERIIQMHSEPI
HHHHHHHHHHHHHHECCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHCCCCE
YTVYMIGFQAGFPYLGGLPENLHTPRRASPRTVVPSGSVGIGGAQTGIYPFSSPGGWQLI
EEEEEEEECCCCCCCCCCCHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEE
GYTKQALFDKNQAQPTLLQAGDTVKFIVEGIEL
EEHHHHHHCCCCCCCCEEECCCHHEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]