Click here to switch to the map view.

The map label for this gene is rsgA [H]

Identifier: 148827137

GI number: 148827137

Start: 415175

End: 416215

Strand: Reverse

Name: rsgA [H]

Synonym: CGSHiGG_02320

Alternate gene names: 148827137

Gene position: 416215-415175 (Counterclockwise)

Preceding gene: 148827139

Following gene: 148827136

Centisome position: 22.05

GC content: 39.0

Gene sequence:

>1041_bases
ATGGCTAAACGTAAATTAACTCAAAACCAAACTCGAAGAATTCAATCAAATAATGCGAAAACATTACATCGCCATAAGAA
AAAAGACATTGAATGGTCAGATGAAATGCTTGGCGAATCGCAAGAAGGCGTTGTGGTCACACGTTATTCTATTCACGCAG
ATGTCGAAAATGAACAAGGCGAAATTTATCGTTGTAATTTGCGTCGTACCTTGTCGAGTTTGGTGGTGGGAGATAAAGTT
GTTTGGCGTAAAGGCAATGAACAATTACAAGGTGTGAGCGGCGTAATTGAGGCGATCCATCCCCGAGAAAATGAAATTTC
CCGCCCTGATTATTATGATGGTTTGAAACCTATTGCGGCGAATATTGATCGTATTATTATTGTATCAGCGGTGTTGCCAA
CACTTTCCTTAAATATTATCGATCGTTATCTTGTTGTGTGTGAAATAGCTGAAATCAAGCCATTAATTGTTTTGAATAAA
GTGGATTTACTGGCGCAGGAACAGCGTCAAGAAATTGAAGACCAACTTAAAATTTACCAAGATATTGGCTATGAAATTTT
AATGATTTCAGCAAAGAGCGGTGAAAATATGGAAAAATTGACCGCACTTTTGGCACAAGGCACGGCGATTTTTGTTGGGC
AATCTGGTGTTGGTAAATCGAGTTTAATTAATCATATTTTGCCTAGCGTAAACGCTCAAGTAGGGGATGTGAGCGAAACA
TCAGGCTTAGGGCAGCATACCACGACATCGTCACGTCTTTACCATTTGCCACAAGGCGGTAATTTAATTGATTCGCCCGG
AATTAGAGAATTTGGGCTTTGGCATTTAGATGCAGAGCAAATCACAAAAGGCTATCGAGAATTTCAATATGTTTTGGGCA
CCTGTAAATTCCGTGATTGTAAACATTTGAGCGATCCAGGATGTGCGTTGCGTGAAGCCGTTGAGCAAGGCAAAATTTCG
CCTGTTCGTTATGATAACTATCATCGATTAATTGAAAGTTTAAGTGAAACAAAATCACAACGTCATTTTTCATTAGTTTA
A

Upstream 100 bases:

>100_bases
TCCAAATAAGATTTTGTTTATCGAATGACATAATATCAGGTATCCTATGCAAAAATTTTTTCATTTTACCAAAAACAAGG
GAAAAAACGACCGCACTTTT

Downstream 100 bases:

>100_bases
CGATTGAGATTGTGAATAATAAATAAACTATTTAGCTTATTTTTATGATTTAATTCAGGCTTTTTTGTGTTTATTCTTGA
TTATTTTGTTCTGAAAAAGG

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MAKRKLTQNQTRRIQSNNAKTLHRHKKKDIEWSDEMLGESQEGVVVTRYSIHADVENEQGEIYRCNLRRTLSSLVVGDKV
VWRKGNEQLQGVSGVIEAIHPRENEISRPDYYDGLKPIAANIDRIIIVSAVLPTLSLNIIDRYLVVCEIAEIKPLIVLNK
VDLLAQEQRQEIEDQLKIYQDIGYEILMISAKSGENMEKLTALLAQGTAIFVGQSGVGKSSLINHILPSVNAQVGDVSET
SGLGQHTTTSSRLYHLPQGGNLIDSPGIREFGLWHLDAEQITKGYREFQYVLGTCKFRDCKHLSDPGCALREAVEQGKIS
PVRYDNYHRLIESLSETKSQRHFSLV

Sequences:

>Translated_346_residues
MAKRKLTQNQTRRIQSNNAKTLHRHKKKDIEWSDEMLGESQEGVVVTRYSIHADVENEQGEIYRCNLRRTLSSLVVGDKV
VWRKGNEQLQGVSGVIEAIHPRENEISRPDYYDGLKPIAANIDRIIIVSAVLPTLSLNIIDRYLVVCEIAEIKPLIVLNK
VDLLAQEQRQEIEDQLKIYQDIGYEILMISAKSGENMEKLTALLAQGTAIFVGQSGVGKSSLINHILPSVNAQVGDVSET
SGLGQHTTTSSRLYHLPQGGNLIDSPGIREFGLWHLDAEQITKGYREFQYVLGTCKFRDCKHLSDPGCALREAVEQGKIS
PVRYDNYHRLIESLSETKSQRHFSLV
>Mature_345_residues
AKRKLTQNQTRRIQSNNAKTLHRHKKKDIEWSDEMLGESQEGVVVTRYSIHADVENEQGEIYRCNLRRTLSSLVVGDKVV
WRKGNEQLQGVSGVIEAIHPRENEISRPDYYDGLKPIAANIDRIIIVSAVLPTLSLNIIDRYLVVCEIAEIKPLIVLNKV
DLLAQEQRQEIEDQLKIYQDIGYEILMISAKSGENMEKLTALLAQGTAIFVGQSGVGKSSLINHILPSVNAQVGDVSETS
GLGQHTTTSSRLYHLPQGGNLIDSPGIREFGLWHLDAEQITKGYREFQYVLGTCKFRDCKHLSDPGCALREAVEQGKISP
VRYDNYHRLIESLSETKSQRHFSLV

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=348, Percent_Identity=53.735632183908, Blast_Score=416, Evalue=1e-117,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 38972; Mature: 38841

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRKLTQNQTRRIQSNNAKTLHRHKKKDIEWSDEMLGESQEGVVVTRYSIHADVENEQG
CCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEEEEECCCCCCC
EIYRCNLRRTLSSLVVGDKVVWRKGNEQLQGVSGVIEAIHPRENEISRPDYYDGLKPIAA
CEEEEHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHH
NIDRIIIVSAVLPTLSLNIIDRYLVVCEIAEIKPLIVLNKVDLLAQEQRQEIEDQLKIYQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
DIGYEILMISAKSGENMEKLTALLAQGTAIFVGQSGVGKSSLINHILPSVNAQVGDVSET
HCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHH
SGLGQHTTTSSRLYHLPQGGNLIDSPGIREFGLWHLDAEQITKGYREFQYVLGTCKFRDC
CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHCEEEECHHHHHHHHHHHHHHHHHCCCCCC
KHLSDPGCALREAVEQGKISPVRYDNYHRLIESLSETKSQRHFSLV
CCCCCCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AKRKLTQNQTRRIQSNNAKTLHRHKKKDIEWSDEMLGESQEGVVVTRYSIHADVENEQG
CCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEEEEECCCCCCC
EIYRCNLRRTLSSLVVGDKVVWRKGNEQLQGVSGVIEAIHPRENEISRPDYYDGLKPIAA
CEEEEHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHH
NIDRIIIVSAVLPTLSLNIIDRYLVVCEIAEIKPLIVLNKVDLLAQEQRQEIEDQLKIYQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
DIGYEILMISAKSGENMEKLTALLAQGTAIFVGQSGVGKSSLINHILPSVNAQVGDVSET
HCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHH
SGLGQHTTTSSRLYHLPQGGNLIDSPGIREFGLWHLDAEQITKGYREFQYVLGTCKFRDC
CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHCEEEECHHHHHHHHHHHHHHHHHCCCCCC
KHLSDPGCALREAVEQGKISPVRYDNYHRLIESLSETKSQRHFSLV
CCCCCCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA