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The map label for this gene is qseC [H]

Identifier: 148827130

GI number: 148827130

Start: 409601

End: 410956

Strand: Reverse

Name: qseC [H]

Synonym: CGSHiGG_02285

Alternate gene names: 148827130

Gene position: 410956-409601 (Counterclockwise)

Preceding gene: 148827131

Following gene: 148827129

Centisome position: 21.78

GC content: 37.68

Gene sequence:

>1356_bases
ATGAAAAATAGAAGCCTTACGTTGCGTCTTATTTCTGTGCTTTGTTTAACCGCACTTTTTGTTTGGCTGGGTTCTACGCT
TGTGGCTTGGTGGCAAGTGCGCCACGATGTGAATAAAGTTTTTGATGCACAACAAGTTCTCTTTGCTGAACGGCTCGCAA
ATTCAGATTTAAGTACTATTTTGTTGGAATCTAGCACAACGCTAAATAAAAATTCACCGTCGGTATTAAAAAAAAGTTAT
GACGATGATGCCTTAGCCTTTGCTATTTTTTCTAAAACTGGGAAACTTTTATTCAGTGATGGACGAAATGGAAAAGATTT
TATTTTTAATTATAAAACGGGGTTTTATAATGCGAATATTTATGATGATGACGATAAATGGCGAATTTTCTGGCGTATGG
CAGCTAATGGAGAATTAGTTATCGCAGTAGGGCAAGAATTAGATTACCGTGAAGATTTAATTGAAGAAATGATTTTTGGG
CAAATGTGGATTTGGTTTGCCAGTTTGCCTATTTTGATCATTGTTTTAGGATGGTTGATTCATAAAGAACTTCGACCGAT
TAAACGTTTAAGCCAAGAAGTACAAACGAGAAAATCTGGCGATGTGTCATTGCTGAATACGGAGGGGCTACCCGTTGAGA
TTTTACCCTTAGTAAAAAATTTAAATCAATTTTTTGACCGCACTTCAGCTATGTTGCAACGCGAACGCCGTTTTACTTCT
GATGCAGCTCACGAATTGCGTAGTCCATTGGCGGCATTGCGTATTCAAACTGAAGTTGCGCAACTAGCTGGCGATGATGT
AGCGTTACGAGAACAAGCACTTTTACATTTAACGCAAGGCATTGATCGGGCTTCGCAATTGATTGAACAATTATTAACGC
TTTCCCGCTTGGATAATTTGCAAGCCTTAGAAACACTACAGCTGCTTGATTGGGAAGCTATTGTTCAATCATTAATTTCT
GAGCGTTATTTTGTGGCAGAAAAACGTAAAATTACCTTGGTTTTTGAGAAAGAATCTGAACCAAAGCAAAAACAAGGGCA
ATCAATTTTAGTTTCATTGATGCTTAGAAATTTACTCGACAATGCTATTAAATATTGTCCTGAAGATACAATCGTTTCAG
TAAAAATTTCATCCTCACAGATTATTATTGAGGACAATGGTGGTGGCGTTGAACCTGAAGATTTGAAAAAACTTGGACAG
CGTTTTTATCGTCCAGCTGGGCAAAATGAAAAGGGAAGTGGCTTGGGGCTTTCTATTGTTATGCGAATTGCGGAATTACA
CGGATTTAAAGTGCGGTTAGAAAACGTTGTAAAAGAGGGGAGAAGAATTGGCTTAAAAGCAATAATATCCTTGTAG

Upstream 100 bases:

>100_bases
GCGCATTGGATGTGCATATTTATAATTTACGCCAAAAATTGGGGAAGCAATTTATTCGAACAGTACACGGTGTTGGATAT
GCTTTGGGACAAGTTGAAAA

Downstream 100 bases:

>100_bases
AAATGGCTTTAAAATAAATGATATTTGTGCGGTAAATTATTTTGTAAATTTTACCGCATTTTTTAGTTTAGCTTTCACTA
ATTTGAAATAATGACTGTAT

Product: sensor protein QseC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MKNRSLTLRLISVLCLTALFVWLGSTLVAWWQVRHDVNKVFDAQQVLFAERLANSDLSTILLESSTTLNKNSPSVLKKSY
DDDALAFAIFSKTGKLLFSDGRNGKDFIFNYKTGFYNANIYDDDDKWRIFWRMAANGELVIAVGQELDYREDLIEEMIFG
QMWIWFASLPILIIVLGWLIHKELRPIKRLSQEVQTRKSGDVSLLNTEGLPVEILPLVKNLNQFFDRTSAMLQRERRFTS
DAAHELRSPLAALRIQTEVAQLAGDDVALREQALLHLTQGIDRASQLIEQLLTLSRLDNLQALETLQLLDWEAIVQSLIS
ERYFVAEKRKITLVFEKESEPKQKQGQSILVSLMLRNLLDNAIKYCPEDTIVSVKISSSQIIIEDNGGGVEPEDLKKLGQ
RFYRPAGQNEKGSGLGLSIVMRIAELHGFKVRLENVVKEGRRIGLKAIISL

Sequences:

>Translated_451_residues
MKNRSLTLRLISVLCLTALFVWLGSTLVAWWQVRHDVNKVFDAQQVLFAERLANSDLSTILLESSTTLNKNSPSVLKKSY
DDDALAFAIFSKTGKLLFSDGRNGKDFIFNYKTGFYNANIYDDDDKWRIFWRMAANGELVIAVGQELDYREDLIEEMIFG
QMWIWFASLPILIIVLGWLIHKELRPIKRLSQEVQTRKSGDVSLLNTEGLPVEILPLVKNLNQFFDRTSAMLQRERRFTS
DAAHELRSPLAALRIQTEVAQLAGDDVALREQALLHLTQGIDRASQLIEQLLTLSRLDNLQALETLQLLDWEAIVQSLIS
ERYFVAEKRKITLVFEKESEPKQKQGQSILVSLMLRNLLDNAIKYCPEDTIVSVKISSSQIIIEDNGGGVEPEDLKKLGQ
RFYRPAGQNEKGSGLGLSIVMRIAELHGFKVRLENVVKEGRRIGLKAIISL
>Mature_451_residues
MKNRSLTLRLISVLCLTALFVWLGSTLVAWWQVRHDVNKVFDAQQVLFAERLANSDLSTILLESSTTLNKNSPSVLKKSY
DDDALAFAIFSKTGKLLFSDGRNGKDFIFNYKTGFYNANIYDDDDKWRIFWRMAANGELVIAVGQELDYREDLIEEMIFG
QMWIWFASLPILIIVLGWLIHKELRPIKRLSQEVQTRKSGDVSLLNTEGLPVEILPLVKNLNQFFDRTSAMLQRERRFTS
DAAHELRSPLAALRIQTEVAQLAGDDVALREQALLHLTQGIDRASQLIEQLLTLSRLDNLQALETLQLLDWEAIVQSLIS
ERYFVAEKRKITLVFEKESEPKQKQGQSILVSLMLRNLLDNAIKYCPEDTIVSVKISSSQIIIEDNGGGVEPEDLKKLGQ
RFYRPAGQNEKGSGLGLSIVMRIAELHGFKVRLENVVKEGRRIGLKAIISL

Specific function: Member of a two-component regulatory system qseB/qseC. May activate qseB by phosphorylation [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=438, Percent_Identity=44.9771689497717, Blast_Score=376, Evalue=1e-105,
Organism=Escherichia coli, GI1786783, Length=297, Percent_Identity=29.6296296296296, Blast_Score=122, Evalue=6e-29,
Organism=Escherichia coli, GI1790551, Length=282, Percent_Identity=29.0780141843972, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1788279, Length=323, Percent_Identity=29.1021671826625, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1786600, Length=272, Percent_Identity=29.4117647058824, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787894, Length=341, Percent_Identity=28.1524926686217, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1790861, Length=204, Percent_Identity=31.8627450980392, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788393, Length=265, Percent_Identity=29.0566037735849, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787374, Length=283, Percent_Identity=28.2685512367491, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1790346, Length=241, Percent_Identity=26.1410788381743, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 51263; Mature: 51263

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRSLTLRLISVLCLTALFVWLGSTLVAWWQVRHDVNKVFDAQQVLFAERLANSDLSTI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEE
LLESSTTLNKNSPSVLKKSYDDDALAFAIFSKTGKLLFSDGRNGKDFIFNYKTGFYNANI
EEECCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCEEEECCCCCCCEEEEECCCEEECCE
YDDDDKWRIFWRMAANGELVIAVGQELDYREDLIEEMIFGQMWIWFASLPILIIVLGWLI
ECCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKELRPIKRLSQEVQTRKSGDVSLLNTEGLPVEILPLVKNLNQFFDRTSAMLQRERRFTS
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAAHELRSPLAALRIQTEVAQLAGDDVALREQALLHLTQGIDRASQLIEQLLTLSRLDNL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
QALETLQLLDWEAIVQSLISERYFVAEKRKITLVFEKESEPKQKQGQSILVSLMLRNLLD
HHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
NAIKYCPEDTIVSVKISSSQIIIEDNGGGVEPEDLKKLGQRFYRPAGQNEKGSGLGLSIV
HHHHHCCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
MRIAELHGFKVRLENVVKEGRRIGLKAIISL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNRSLTLRLISVLCLTALFVWLGSTLVAWWQVRHDVNKVFDAQQVLFAERLANSDLSTI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEE
LLESSTTLNKNSPSVLKKSYDDDALAFAIFSKTGKLLFSDGRNGKDFIFNYKTGFYNANI
EEECCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCEEEECCCCCCCEEEEECCCEEECCE
YDDDDKWRIFWRMAANGELVIAVGQELDYREDLIEEMIFGQMWIWFASLPILIIVLGWLI
ECCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKELRPIKRLSQEVQTRKSGDVSLLNTEGLPVEILPLVKNLNQFFDRTSAMLQRERRFTS
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAAHELRSPLAALRIQTEVAQLAGDDVALREQALLHLTQGIDRASQLIEQLLTLSRLDNL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
QALETLQLLDWEAIVQSLISERYFVAEKRKITLVFEKESEPKQKQGQSILVSLMLRNLLD
HHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
NAIKYCPEDTIVSVKISSSQIIIEDNGGGVEPEDLKKLGQRFYRPAGQNEKGSGLGLSIV
HHHHHCCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
MRIAELHGFKVRLENVVKEGRRIGLKAIISL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]