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The map label for this gene is qseB

Identifier: 148827131

GI number: 148827131

Start: 410953

End: 411618

Strand: Reverse

Name: qseB

Synonym: CGSHiGG_02290

Alternate gene names: 148827131

Gene position: 411618-410953 (Counterclockwise)

Preceding gene: 148827132

Following gene: 148827130

Centisome position: 21.81

GC content: 38.89

Gene sequence:

>666_bases
ATGAGAATTTTATTGATAGAAGACGATAATCTAATCGGCAATGGGTTGCAGATTGGTTTAACCAAACTTGGTTTTGCGGT
GGATTGGTTTACTGATGGAAAAACAGGAATGGCTGCTTTAACCTCTGCGCCTTATGATGCGGTGGTATTGGATTTAACCT
TGCCTAAACTTGATGGATTAGAGGTATTGCAACAATGGCGATCTAATCATCAAGATGTTCCCGTATTAATTTTGACTGCT
CGCGATACTTTAGATGAACGAGTTAAAGGTTTACAAAGTGGTGCAGATGATTATCTTTGCAAGCCTTTTGCTTTGGCTGA
AGTCGCCGCACGTTTACAAGCCCTTATTCGTCGTCGTTATGGATATCATCATTCTGTGATAGAACAGGCTGGTGTTAAGC
TCGATCAGAATCAACGTTCTGTTTGGCTGAATAATCAACCCATTTCTTTAACAAGCCGTGAATATAAATTGCTTGAATTA
TTTATGCTGAATAAAGATCGCGTATTGTCTCGCTCATCCATTGAAGAAAAATTATCCAGTTGGGATGAAGAAATTAGCAG
TGGCGCATTGGATGTGCATATTTATAATTTACGCCAAAAATTGGGGAAGCAATTTATTCGAACAGTACACGGTGTTGGAT
ATGCTTTGGGACAAGTTGAAAAATGA

Upstream 100 bases:

>100_bases
CAGAACTTGATGTATTGCGCGTTGAAAAAGCAGAATAATTATCTTTGAAAATAGCGGGCATTAGCTCGCTATTTTTGTTT
ATAAAGTGCGGTCAATTTTT

Downstream 100 bases:

>100_bases
AAAATAGAAGCCTTACGTTGCGTCTTATTTCTGTGCTTTGTTTAACCGCACTTTTTGTTTGGCTGGGTTCTACGCTTGTG
GCTTGGTGGCAAGTGCGCCA

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEVLQQWRSNHQDVPVLILTA
RDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRYGYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLEL
FMLNKDRVLSRSSIEEKLSSWDEEISSGALDVHIYNLRQKLGKQFIRTVHGVGYALGQVEK

Sequences:

>Translated_221_residues
MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEVLQQWRSNHQDVPVLILTA
RDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRYGYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLEL
FMLNKDRVLSRSSIEEKLSSWDEEISSGALDVHIYNLRQKLGKQFIRTVHGVGYALGQVEK
>Mature_221_residues
MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEVLQQWRSNHQDVPVLILTA
RDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRYGYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLEL
FMLNKDRVLSRSSIEEKLSSWDEEISSGALDVHIYNLRQKLGKQFIRTVHGVGYALGQVEK

Specific function: Member of a two-component regulatory system qseB/qseC

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain

Homologues:

Organism=Escherichia coli, GI1789402, Length=218, Percent_Identity=60.5504587155963, Blast_Score=276, Evalue=5e-76,
Organism=Escherichia coli, GI1790552, Length=216, Percent_Identity=43.5185185185185, Blast_Score=176, Evalue=9e-46,
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=38.9140271493213, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI87082012, Length=225, Percent_Identity=36, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1787375, Length=218, Percent_Identity=37.1559633027523, Blast_Score=144, Evalue=3e-36,
Organism=Escherichia coli, GI1786599, Length=220, Percent_Identity=33.1818181818182, Blast_Score=120, Evalue=6e-29,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=32.579185520362, Blast_Score=110, Evalue=6e-26,
Organism=Escherichia coli, GI1788394, Length=220, Percent_Identity=31.8181818181818, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=29.9559471365639, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1786911, Length=222, Percent_Identity=29.7297297297297, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI2367329, Length=233, Percent_Identity=32.618025751073, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787229, Length=223, Percent_Identity=30.4932735426009, Blast_Score=94, Evalue=5e-21,
Organism=Escherichia coli, GI1790863, Length=226, Percent_Identity=27.4336283185841, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1790299, Length=172, Percent_Identity=30.8139534883721, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=30.8411214953271, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790437, Length=124, Percent_Identity=29.0322580645161, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI48994928, Length=150, Percent_Identity=28.6666666666667, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): QSEB_HAEIN (P45337)

Other databases:

- EMBL:   L42023
- PIR:   F64137
- RefSeq:   NP_439850.1
- ProteinModelPortal:   P45337
- SMR:   P45337
- GeneID:   950525
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1708
- TIGR:   HI_1708
- HOGENOM:   HBG753323
- OMA:   DNNMRIL
- ProtClustDB:   CLSK870014
- BioCyc:   HINF71421:HI_1708-MONOMER
- GO:   GO:0005737
- GO:   GO:0006350
- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- SMART:   SM00448
- SMART:   SM00862

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C; SSF52172 CheY_like

EC number: NA

Molecular weight: Translated: 24903; Mature: 24903

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGL
CEEEEEECCCEECCCCEEHHHHHCEEEEEECCCCCCHHHHHCCCCCEEEEEEECCCCCCH
EVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRY
HHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKLSS
CCHHHHHHHHCCEECCCCCEEEECCCCCEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
WDEEISSGALDVHIYNLRQKLGKQFIRTVHGVGYALGQVEK
HHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGL
CEEEEEECCCEECCCCEEHHHHHCEEEEEECCCCCCHHHHHCCCCCEEEEEEECCCCCCH
EVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRY
HHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKLSS
CCHHHHHHHHCCEECCCCCEEEECCCCCEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
WDEEISSGALDVHIYNLRQKLGKQFIRTVHGVGYALGQVEK
HHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800