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The map label for this gene is kgd [C]

Identifier: 148827093

GI number: 148827093

Start: 364154

End: 365623

Strand: Reverse

Name: kgd [C]

Synonym: CGSHiGG_02060

Alternate gene names: 148827093

Gene position: 365623-364154 (Counterclockwise)

Preceding gene: 148827094

Following gene: 148827092

Centisome position: 19.37

GC content: 35.58

Gene sequence:

>1470_bases
ATGGTAGTGTTTAAAAGCACCTTAAAGTTATCATTATTCGCCTTATCATTATCTATGATGATGTCGGGTTGTGTTTTAGT
AGGTTTGAGCAAAAATGACCAATCTAAATCATTGTACGGCATTAATCTTTCCCATTTGTCACTCGCAGAAAGAAAAGAGC
TTGAAGAAGCCATTTATGCGGATCAGCAACGTTTAACGGAAGAAAAACAAACATTGCTTAATATGACGCTAACACACGAA
ATAGGCGATCATAAGTTACAATTTAAGCCTTTACTCGCGCGTTTATATGCATCTCGTAAATATGCCCCGTTATGGACTGA
CAATGCGGCAGCTCGTCAATTGTTACGTGATTATGCGGCAATGGTGGCAAGCGGTATTTCAAAATCGTCGGCAACTTCAC
TAGAAACATTGGCATTGGTAGAACAGCAAGGCGGATTGGTTTATGATGTGTTATTAAGTGATATTTTGTTAGATTACTTA
TATTACACACAAAATGTTCGTTCTCAAGCATCTAATTGGTTGTATTCATCTGCTCAGTATCAAGCACAACAGCCTGAAAA
TGATCATATTCAACGCTGGTTAAGTGCGGTGGAAAATAATCAACTTCTTGATTTCATACAAAGTTTAGCGGGAGAAAATC
ATTTATATCGCCAAACAGTTCAATCATTGCCGATGTTTATTCCGACTTCTAAAGAATCAAATATTGCTCAAAAACTGGCA
ATGAATGCACAGCGTTTACGTGTGATTCCTGATTTTCATAATGGAATTTTTGTGAATATTCCAAGCTATAAATTACAGTA
TTATCGTGATGGCGATTTAATTTTAGAATCTCGGGTAATTGTTGGCACAGATTCGCGCAGGACACCTGTAATGTATAGCA
AATTAAGTAATGTGGTTGTAAATCCACCTTGGAATGCGCCAATTCGCTTAATTAATGAAGATTTATTGCCAAAAATGAAA
GCCGATCCAAATTATATTACGGAGCATAATTATTCAATTTTAGATAATCAAGGCAATGTTGTTGATCCTGCTTCTATTGA
TTGGGAATCTATTGGTAATAAATTTCCTTATCGAGTTCGACAAGCGGCTGGCGATAGTGCCTTAGGTAATTATAAATTTA
ATATGCCAAGTTCTGATGCAATTTATTTACACGATACGCCAAATCGCGGATTGTTTAATCGTAAAAATCGAGCGTTAAGT
TCTGGTTGTGTGCGTGTTGAAAAATCTGATCAATTGGCAAGTATTTTATTAAAAGAAGCAGGTTGGACAGAAACTCGAAA
AAATACAGTATTAGCAAGTAAAAAAACCACTTCTGCGCCGATACGCTCGGATAATCCTGTTTTTTTATATTATGTTACTG
CGTGGATTGAAAACGGAAATATTGTAAATTTACCTGATATTTATGGTTATGATCGTCAGATTAATCTTGCTGAGATTAAT
TGGGATCTCGTAAAAAAATATCTTCAATAA

Upstream 100 bases:

>100_bases
CGAAGCAAAAACGGAAAGTAAAAATAAATACTAAATGGTTTTGACCGCACTTTGTTTGAGAAAAGCAACAAGTGCGGTGA
TTTTAATAAAGGTTTAGGAA

Downstream 100 bases:

>100_bases
AATAAGGGAGCTATAATGAATTATGTGGATCAGAATAAACGAAAATGGTTATCGCTGGGCGGTATTGCGTTAGGAATATC
TATTTTACCAAATTCTGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MVVFKSTLKLSLFALSLSMMMSGCVLVGLSKNDQSKSLYGINLSHLSLAERKELEEAIYADQQRLTEEKQTLLNMTLTHE
IGDHKLQFKPLLARLYASRKYAPLWTDNAAARQLLRDYAAMVASGISKSSATSLETLALVEQQGGLVYDVLLSDILLDYL
YYTQNVRSQASNWLYSSAQYQAQQPENDHIQRWLSAVENNQLLDFIQSLAGENHLYRQTVQSLPMFIPTSKESNIAQKLA
MNAQRLRVIPDFHNGIFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMYSKLSNVVVNPPWNAPIRLINEDLLPKMK
ADPNYITEHNYSILDNQGNVVDPASIDWESIGNKFPYRVRQAAGDSALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALS
SGCVRVEKSDQLASILLKEAGWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNLPDIYGYDRQINLAEIN
WDLVKKYLQ

Sequences:

>Translated_489_residues
MVVFKSTLKLSLFALSLSMMMSGCVLVGLSKNDQSKSLYGINLSHLSLAERKELEEAIYADQQRLTEEKQTLLNMTLTHE
IGDHKLQFKPLLARLYASRKYAPLWTDNAAARQLLRDYAAMVASGISKSSATSLETLALVEQQGGLVYDVLLSDILLDYL
YYTQNVRSQASNWLYSSAQYQAQQPENDHIQRWLSAVENNQLLDFIQSLAGENHLYRQTVQSLPMFIPTSKESNIAQKLA
MNAQRLRVIPDFHNGIFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMYSKLSNVVVNPPWNAPIRLINEDLLPKMK
ADPNYITEHNYSILDNQGNVVDPASIDWESIGNKFPYRVRQAAGDSALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALS
SGCVRVEKSDQLASILLKEAGWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNLPDIYGYDRQINLAEIN
WDLVKKYLQ
>Mature_489_residues
MVVFKSTLKLSLFALSLSMMMSGCVLVGLSKNDQSKSLYGINLSHLSLAERKELEEAIYADQQRLTEEKQTLLNMTLTHE
IGDHKLQFKPLLARLYASRKYAPLWTDNAAARQLLRDYAAMVASGISKSSATSLETLALVEQQGGLVYDVLLSDILLDYL
YYTQNVRSQASNWLYSSAQYQAQQPENDHIQRWLSAVENNQLLDFIQSLAGENHLYRQTVQSLPMFIPTSKESNIAQKLA
MNAQRLRVIPDFHNGIFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMYSKLSNVVVNPPWNAPIRLINEDLLPKMK
ADPNYITEHNYSILDNQGNVVDPASIDWESIGNKFPYRVRQAAGDSALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALS
SGCVRVEKSDQLASILLKEAGWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNLPDIYGYDRQINLAEIN
WDLVKKYLQ

Specific function: Unknown

COG id: COG2989

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1787155, Length=242, Percent_Identity=50.4132231404959, Blast_Score=240, Evalue=2e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 55482; Mature: 55482

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVFKSTLKLSLFALSLSMMMSGCVLVGLSKNDQSKSLYGINLSHLSLAERKELEEAIYA
CEEECCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHH
DQQRLTEEKQTLLNMTLTHEIGDHKLQFKPLLARLYASRKYAPLWTDNAAARQLLRDYAA
HHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
MVASGISKSSATSLETLALVEQQGGLVYDVLLSDILLDYLYYTQNVRSQASNWLYSSAQY
HHHHCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHH
QAQQPENDHIQRWLSAVENNQLLDFIQSLAGENHLYRQTVQSLPMFIPTSKESNIAQKLA
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCHHHHHHHH
MNAQRLRVIPDFHNGIFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMYSKLSNVVV
CCHHHEEECCCCCCCEEEECCCEEEEEEECCCEEEEEEEEEECCCCCCCHHHHHHCCEEE
NPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIGNKFPYRVR
CCCCCCCHHHHCHHHCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCHHHHCCCCCHHHH
QAAGDSALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQLASILLKEA
HHCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCHHHHHCCEEECCCHHHHHHHHHHC
GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNLPDIYGYDRQINLAEIN
CCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCEEECCCCCCCCCEEEEEECC
WDLVKKYLQ
HHHHHHHHC
>Mature Secondary Structure
MVVFKSTLKLSLFALSLSMMMSGCVLVGLSKNDQSKSLYGINLSHLSLAERKELEEAIYA
CEEECCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHH
DQQRLTEEKQTLLNMTLTHEIGDHKLQFKPLLARLYASRKYAPLWTDNAAARQLLRDYAA
HHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
MVASGISKSSATSLETLALVEQQGGLVYDVLLSDILLDYLYYTQNVRSQASNWLYSSAQY
HHHHCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHH
QAQQPENDHIQRWLSAVENNQLLDFIQSLAGENHLYRQTVQSLPMFIPTSKESNIAQKLA
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCHHHHHHHH
MNAQRLRVIPDFHNGIFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMYSKLSNVVV
CCHHHEEECCCCCCCEEEECCCEEEEEEECCCEEEEEEEEEECCCCCCCHHHHHHCCEEE
NPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIGNKFPYRVR
CCCCCCCHHHHCHHHCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCHHHHCCCCCHHHH
QAAGDSALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQLASILLKEA
HHCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCHHHHHCCEEECCCHHHHHHHHHHC
GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNLPDIYGYDRQINLAEIN
CCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCEEECCCCCCCCCEEEEEECC
WDLVKKYLQ
HHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]