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The map label for this gene is ycbK [C]

Identifier: 148827092

GI number: 148827092

Start: 363578

End: 364138

Strand: Reverse

Name: ycbK [C]

Synonym: CGSHiGG_02055

Alternate gene names: 148827092

Gene position: 364138-363578 (Counterclockwise)

Preceding gene: 148827093

Following gene: 148827091

Centisome position: 19.3

GC content: 36.72

Gene sequence:

>561_bases
ATGAATTATGTGGATCAGAATAAACGAAAATGGTTATCGCTGGGCGGTATTGCGTTAGGAATATCTATTTTACCAAATTC
TGTATTAGCAATGGTTTCAACACCTAAACCTCGTATTTTAACTTTCCGCAACATTAATACGGGCGAAAGATTAAGTGGAG
AGTTTTCTTTAGCAAAAGGTTTTTCGCCTGCGATGTTAAAAAAATTGGATTATTTAATGCGTGATAAAAGGACAAATCAA
GTGCATAAAATGGATCCAAATTTATTCCAGAAATTTTATAATATCCAAACTAATTTAGGCTTACGCAATGCTGAAATTGA
AGTAATTTGTGGTTATCGTTCAGCCGCTACTAATGCAATGCGTCATCGCCAAAGTCGTGGCGTAGCGAAAAATAGTTATC
ACATTAAAGGAAAAGCCATTGATTTTCGTATTGCAGATGTGCCTTTGATTAAAGTGAAATCTTCTGCGGAAAGTCTGCGA
AATGGTGGCGTGGGTTATTATCCAACCAGTAATTTCATTCACGTAGATACAGGCCCTGTGAGAACTTGGAAAGGCGTGTA
A

Upstream 100 bases:

>100_bases
AAATTTACCTGATATTTATGGTTATGATCGTCAGATTAATCTTGCTGAGATTAATTGGGATCTCGTAAAAAAATATCTTC
AATAAAATAAGGGAGCTATA

Downstream 100 bases:

>100_bases
AACAAATGTAAAATTAACCGCACTTTTGTGCGGTTTTTCATTGGAAAAGAAATGTTATTTGACAGCCATCTTCATTTAGA
CCAACTCTCTGACGAGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MNYVDQNKRKWLSLGGIALGISILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDYLMRDKRTNQ
VHKMDPNLFQKFYNIQTNLGLRNAEIEVICGYRSAATNAMRHRQSRGVAKNSYHIKGKAIDFRIADVPLIKVKSSAESLR
NGGVGYYPTSNFIHVDTGPVRTWKGV

Sequences:

>Translated_186_residues
MNYVDQNKRKWLSLGGIALGISILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDYLMRDKRTNQ
VHKMDPNLFQKFYNIQTNLGLRNAEIEVICGYRSAATNAMRHRQSRGVAKNSYHIKGKAIDFRIADVPLIKVKSSAESLR
NGGVGYYPTSNFIHVDTGPVRTWKGV
>Mature_186_residues
MNYVDQNKRKWLSLGGIALGISILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDYLMRDKRTNQ
VHKMDPNLFQKFYNIQTNLGLRNAEIEVICGYRSAATNAMRHRQSRGVAKNSYHIKGKAIDFRIADVPLIKVKSSAESLR
NGGVGYYPTSNFIHVDTGPVRTWKGV

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycbK [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=183, Percent_Identity=49.1803278688525, Blast_Score=191, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 20887; Mature: 20887

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYVDQNKRKWLSLGGIALGISILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKG
CCCCCCCCHHEEECCCCEEEEECCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEECCC
FSPAMLKKLDYLMRDKRTNQVHKMDPNLFQKFYNIQTNLGLRNAEIEVICGYRSAATNAM
CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHH
RHRQSRGVAKNSYHIKGKAIDFRIADVPLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPV
HHHHHCCCCCCCEEEECEEEEEEECCCEEEEECCHHHHHHCCCCEECCCCCEEEECCCCC
RTWKGV
CCCCCC
>Mature Secondary Structure
MNYVDQNKRKWLSLGGIALGISILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKG
CCCCCCCCHHEEECCCCEEEEECCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEECCC
FSPAMLKKLDYLMRDKRTNQVHKMDPNLFQKFYNIQTNLGLRNAEIEVICGYRSAATNAM
CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHH
RHRQSRGVAKNSYHIKGKAIDFRIADVPLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPV
HHHHHCCCCCCCEEEECEEEEEEECCCEEEEECCHHHHHHCCCCEECCCCCEEEECCCCC
RTWKGV
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]