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The map label for this gene is yciM [C]

Identifier: 148827067

GI number: 148827067

Start: 334518

End: 335708

Strand: Reverse

Name: yciM [C]

Synonym: CGSHiGG_01890

Alternate gene names: 148827067

Gene position: 335708-334518 (Counterclockwise)

Preceding gene: 148827068

Following gene: 148827066

Centisome position: 17.79

GC content: 34.84

Gene sequence:

>1191_bases
ATGATAGAATTACTCTTTCTATTATTGCCTATTGCTGCTGCCTATGGCTGGTATATGGGGCGGCGTAGTGCGAAGAAAGA
TCAAGATGACATAAGTAATAAACTCTCCCGAGATTATGTTACGGGAGTGAATTTTTTACTTTCCAATCAAACTGATAAAG
CTGTAGATTTGTTTTTAGATATGTTGCAAAAGCAAGAAATCGAAAATGAAATCGAAAGTCACTCCCAATTTGAAGCAGAA
CTTACACTTGGCAATCTGTTTCGTTCTCGAGGCGAAGTTGATCGTGCATTGCGCATTCATCAAGCTTTAGATCTTAGTCC
TAATTATACTTTTGAACAAAAATTACTTGCAAAACAACAGCTTGCTCGAGATTTTATGGTGGTTGGTTTTTTTGACCGAG
CTGAGAATCTTTATATTTTACTAGTAGATGAACCTGAGTTTGCAGAAAATGCTTTACAGCAACTTTTAGTGATTTATCAA
AAGACAAAAGAATGGAAAAAAGCAGTCAATATTGCTGAAAAACTCGCTAAAATAAAGCCACAAGAGAATAATATTGAACT
TGCGCAATGTTATTGTGAATATTCACAAAGTTTAGAGCCTGAAAGTGCGGTTGAAAAACGCAGTGTTTTACAAAAGGCTT
TGTCTGTTTCTCCGACTTGTGTTCGCGCTTCTTTATTGCTTGCAAATTTAGCAATGCTTGACGGTCAATATCAACAAGCA
GTAAAAATATTAGAAAATGTTTTGGAGCAAAATCCAGATTATACGGGTGAAATTTTGTTACCTTTAAAACATTGTTACGA
AGAATTAAATCAGTTAGATAATTTTGAGTTATTTTTAATTCGTGCAGGTCAAATTATTAATAATGATGAAGTAGAGCTGG
CACTAGCCAAATTAATTGAAGAAAAAGATGGCAAGTCTGCTGCACAAGCTAAGCTTTATCAGCAACTCACGAAAAAGCCA
AGTACTTTAATTTTCCATCGTTTTATGCAATATCAAATTGATGATGCAGAAGACGGGCGGGGAAAAGAAAGCTTAATTTT
ATTACATAAAATGGTTGGCGAAAGGATTAAGCAAACATCGCCTTATCGTTGTACAAATTGTGGTTATCAAATCCATAAGC
TATTGTGGAATTGCCCATCTTGCCGTCAATGGGAAAGTATTAAACCGGTTTCAAATCAAGAACATAATTAA

Upstream 100 bases:

>100_bases
ATATTAAGTTAAAATTAAAAAATATGGCACTAGCTCGTCAAGTGAAACGTCAGACTTTACAAATCAATGAATTGACGACT
ACGCGCGATAAGGTCGTTTA

Downstream 100 bases:

>100_bases
TTGACACTCAGTGAGGTAACATTATGACAAGTAAAATTAATTGTGGCATTGGATTTCGAGAAAGAAGCAGAGGCTCTTGC
TTTAGTTGATCAAATTGATC

Product: tetratricopeptide repeat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MIELLFLLLPIAAAYGWYMGRRSAKKDQDDISNKLSRDYVTGVNFLLSNQTDKAVDLFLDMLQKQEIENEIESHSQFEAE
LTLGNLFRSRGEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPEFAENALQQLLVIYQ
KTKEWKKAVNIAEKLAKIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQYQQA
VKILENVLEQNPDYTGEILLPLKHCYEELNQLDNFELFLIRAGQIINNDEVELALAKLIEEKDGKSAAQAKLYQQLTKKP
STLIFHRFMQYQIDDAEDGRGKESLILLHKMVGERIKQTSPYRCTNCGYQIHKLLWNCPSCRQWESIKPVSNQEHN

Sequences:

>Translated_396_residues
MIELLFLLLPIAAAYGWYMGRRSAKKDQDDISNKLSRDYVTGVNFLLSNQTDKAVDLFLDMLQKQEIENEIESHSQFEAE
LTLGNLFRSRGEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPEFAENALQQLLVIYQ
KTKEWKKAVNIAEKLAKIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQYQQA
VKILENVLEQNPDYTGEILLPLKHCYEELNQLDNFELFLIRAGQIINNDEVELALAKLIEEKDGKSAAQAKLYQQLTKKP
STLIFHRFMQYQIDDAEDGRGKESLILLHKMVGERIKQTSPYRCTNCGYQIHKLLWNCPSCRQWESIKPVSNQEHN
>Mature_396_residues
MIELLFLLLPIAAAYGWYMGRRSAKKDQDDISNKLSRDYVTGVNFLLSNQTDKAVDLFLDMLQKQEIENEIESHSQFEAE
LTLGNLFRSRGEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPEFAENALQQLLVIYQ
KTKEWKKAVNIAEKLAKIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQYQQA
VKILENVLEQNPDYTGEILLPLKHCYEELNQLDNFELFLIRAGQIINNDEVELALAKLIEEKDGKSAAQAKLYQQLTKKP
STLIFHRFMQYQIDDAEDGRGKESLILLHKMVGERIKQTSPYRCTNCGYQIHKLLWNCPSCRQWESIKPVSNQEHN

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats

Homologues:

Organism=Escherichia coli, GI2367116, Length=384, Percent_Identity=47.1354166666667, Blast_Score=381, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1223_HAEIN (P44130)

Other databases:

- EMBL:   L42023
- PIR:   D64022
- RefSeq:   NP_439379.1
- ProteinModelPortal:   P44130
- GeneID:   950168
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1223
- NMPDR:   fig|71421.1.peg.1169
- TIGR:   HI_1223
- HOGENOM:   HBG465026
- OMA:   FKGLNFL
- ProtClustDB:   PRK11788
- BioCyc:   HINF71421:HI_1223-MONOMER
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734
- Gene3D:   G3DSA:1.25.40.10
- SMART:   SM00028

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45628; Mature: 45628

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS50005 TPR; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELLFLLLPIAAAYGWYMGRRSAKKDQDDISNKLSRDYVTGVNFLLSNQTDKAVDLFLD
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
MLQKQEIENEIESHSQFEAELTLGNLFRSRGEVDRALRIHQALDLSPNYTFEQKLLAKQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LARDFMVVGFFDRAENLYILLVDEPEFAENALQQLLVIYQKTKEWKKAVNIAEKLAKIKP
HHHHHHHEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQYQQA
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHH
VKILENVLEQNPDYTGEILLPLKHCYEELNQLDNFELFLIRAGQIINNDEVELALAKLIE
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHH
EKDGKSAAQAKLYQQLTKKPSTLIFHRFMQYQIDDAEDGRGKESLILLHKMVGERIKQTS
HCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PYRCTNCGYQIHKLLWNCPSCRQWESIKPVSNQEHN
CCEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIELLFLLLPIAAAYGWYMGRRSAKKDQDDISNKLSRDYVTGVNFLLSNQTDKAVDLFLD
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
MLQKQEIENEIESHSQFEAELTLGNLFRSRGEVDRALRIHQALDLSPNYTFEQKLLAKQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LARDFMVVGFFDRAENLYILLVDEPEFAENALQQLLVIYQKTKEWKKAVNIAEKLAKIKP
HHHHHHHEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQYQQA
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHH
VKILENVLEQNPDYTGEILLPLKHCYEELNQLDNFELFLIRAGQIINNDEVELALAKLIE
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHH
EKDGKSAAQAKLYQQLTKKPSTLIFHRFMQYQIDDAEDGRGKESLILLHKMVGERIKQTS
HCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PYRCTNCGYQIHKLLWNCPSCRQWESIKPVSNQEHN
CCEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800