Click here to switch to the map view.

The map label for this gene is sanA [H]

Identifier: 148827035

GI number: 148827035

Start: 287993

End: 288673

Strand: Direct

Name: sanA [H]

Synonym: CGSHiGG_01690

Alternate gene names: 148827035

Gene position: 287993-288673 (Clockwise)

Preceding gene: 148827033

Following gene: 148827044

Centisome position: 15.26

GC content: 39.21

Gene sequence:

>681_bases
ATGTTTACCGCTATGCTAGTAAAAAAATTCTCTCCAAAATTCACCGCACTTTTTCGCGCACTACTCTACGCAATCTTTGC
ATTGATTATACTTTGCTTGCTAGTGGATCGAGGCGTAAGTTTTTATGTTCGCGATAAAATATTCACAAATATTGATGAAC
TCCCCTTTCGTCCTTATGCCCTTGTGCTTGGCACATCAAAATACACCGTCAGCGGAAAACCGAACGTTTATTACGATAGT
CGCTTAATGGCAGCTAAAAACCTAATCGAACAACAAAAAGTGAATTATCTTTTATTAAGTGGCGACAACCGAACTTTGCA
ATATAACGAACCAAGAGCAATGTTTCGCGATTTACGCAAAATGGGCGTATCTGAAGCCTCTATGTTCCGTGATTTTGCAG
GTTTCCGCACCCTAGATTCCGTTATCCGTGCCGATAAAATTTTCCAAGTGAAAACATTTACGATTGTCAGTCAAAAATTT
CATTGCGAACGCGCACTATTAATTGCCCAAGCACATAATATTGATGCCATTTGCTTTGTGGCAAAACAGCCAGAATTACA
TTTTTCCACACAAATAAGAGAAGTTTTTGCCCGCATAAAAGCGGTTTTTGACTTGATATTAGGTGTTGAGCCTTATTTTT
TAGGGGAACCTCAGCCATTGCCAAACAGCACCACATTATAA

Upstream 100 bases:

>100_bases
TGTCAAGAAATTTTAGCCGTCTAAACGGCTAAATTATCGCACATCAATGCGATTCACAAAATCCATCAAATTCTCCTTGA
AGTGCGGTCGATTTTTCATT

Downstream 100 bases:

>100_bases
ATATTGTTCTAAATCATATTTCTTCTATTTTTCTAAAATCACACTAATCTAAACTCGTTAAATAAACACAAACTGGTTAA
AATCCAACCGATAAGGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MFTAMLVKKFSPKFTALFRALLYAIFALIILCLLVDRGVSFYVRDKIFTNIDELPFRPYALVLGTSKYTVSGKPNVYYDS
RLMAAKNLIEQQKVNYLLLSGDNRTLQYNEPRAMFRDLRKMGVSEASMFRDFAGFRTLDSVIRADKIFQVKTFTIVSQKF
HCERALLIAQAHNIDAICFVAKQPELHFSTQIREVFARIKAVFDLILGVEPYFLGEPQPLPNSTTL

Sequences:

>Translated_226_residues
MFTAMLVKKFSPKFTALFRALLYAIFALIILCLLVDRGVSFYVRDKIFTNIDELPFRPYALVLGTSKYTVSGKPNVYYDS
RLMAAKNLIEQQKVNYLLLSGDNRTLQYNEPRAMFRDLRKMGVSEASMFRDFAGFRTLDSVIRADKIFQVKTFTIVSQKF
HCERALLIAQAHNIDAICFVAKQPELHFSTQIREVFARIKAVFDLILGVEPYFLGEPQPLPNSTTL
>Mature_226_residues
MFTAMLVKKFSPKFTALFRALLYAIFALIILCLLVDRGVSFYVRDKIFTNIDELPFRPYALVLGTSKYTVSGKPNVYYDS
RLMAAKNLIEQQKVNYLLLSGDNRTLQYNEPRAMFRDLRKMGVSEASMFRDFAGFRTLDSVIRADKIFQVKTFTIVSQKF
HCERALLIAQAHNIDAICFVAKQPELHFSTQIREVFARIKAVFDLILGVEPYFLGEPQPLPNSTTL

Specific function: Participates in the barrier function of the cell envelope [H]

COG id: COG2949

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788466, Length=187, Percent_Identity=45.4545454545455, Blast_Score=160, Evalue=5e-41,
Organism=Escherichia coli, GI1789468, Length=219, Percent_Identity=38.3561643835616, Blast_Score=120, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 25945; Mature: 25945

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTAMLVKKFSPKFTALFRALLYAIFALIILCLLVDRGVSFYVRDKIFTNIDELPFRPYA
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCHHHCCCCCEE
LVLGTSKYTVSGKPNVYYDSRLMAAKNLIEQQKVNYLLLSGDNRTLQYNEPRAMFRDLRK
EEEECCEEEECCCCCEEECHHHHHHHHHHHHHHCCEEEEECCCCEEEECCHHHHHHHHHH
MGVSEASMFRDFAGFRTLDSVIRADKIFQVKTFTIVSQKFHCERALLIAQAHNIDAICFV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHEEHHHHHHHHHHHHHHHCCCCCEEEEE
AKQPELHFSTQIREVFARIKAVFDLILGVEPYFLGEPQPLPNSTTL
ECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFTAMLVKKFSPKFTALFRALLYAIFALIILCLLVDRGVSFYVRDKIFTNIDELPFRPYA
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCHHHCCCCCEE
LVLGTSKYTVSGKPNVYYDSRLMAAKNLIEQQKVNYLLLSGDNRTLQYNEPRAMFRDLRK
EEEECCEEEECCCCCEEECHHHHHHHHHHHHHHCCEEEEECCCCEEEECCHHHHHHHHHH
MGVSEASMFRDFAGFRTLDSVIRADKIFQVKTFTIVSQKFHCERALLIAQAHNIDAICFV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHEEHHHHHHHHHHHHHHHCCCCCEEEEE
AKQPELHFSTQIREVFARIKAVFDLILGVEPYFLGEPQPLPNSTTL
ECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]