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The map label for this gene is dapB [H]

Identifier: 148826996

GI number: 148826996

Start: 239699

End: 240511

Strand: Reverse

Name: dapB [H]

Synonym: CGSHiGG_01420

Alternate gene names: 148826996

Gene position: 240511-239699 (Counterclockwise)

Preceding gene: 148826997

Following gene: 148826994

Centisome position: 12.74

GC content: 41.57

Gene sequence:

>813_bases
ATGACATTAAAAATTGCAATCGCTGGTGCTGGCGGAAGAATGGGGCGTCAATTAATTCAAGCGGTTCATTCTGCGGAAGG
CGTAGAACTAGGTGCAGCTTTTGAACGCAAAGGATCATCTTTAGTTGGGACGGATGCGGGAGAATTGGCGGGAATTGGTC
ATCTTGGCGTTGCAGTTTCAGACGATCTTGAAAGCCAAAAAGATAAATTCGATTTATTAATCGATTTTACCCGACCAGAA
GGCACCCTTGAACATATTGCATTTTGCGTAGCGAATAATAAAAAAATGGTGATCGGTACAACAGGTTTTGATGAAAATGG
TAAAACGGCGATTAAAGCAGCTTCAGATAAAATTGCTATTGTGTTTGCATCAAATTTCAGTGTTGGCGTGAATTTAGTCT
TCAAGCTTTTAGAAAAAGCAGCAAAAGTGATGGGGGATTATTGCGATATTGAAGTGATCGAAGCGCATCACCGTCATAAA
GTTGATGCGCCATCTGGCACTGCACTTTCTATGGGCGAACATATCGCAAAAACCTTAGGTCGCGATTTAAAAACGCACGG
AGTCTTCTGCCGTGAAGGAATTACAGGAGAACGTAAACGCGATGAAATTGGTTTTTCAACTATTCGCGCTTCGGATGTGG
TGGGGGAACACACGGTTTGGTTTGCAGATATTGGCGAACGTGTAGAAATTTCCCATAAAGCATCAAGCCGAATGACTTTC
GCTAATGGTGCAGTGCGTGCTGGTAAATGGTTAGAAAATAAGGCGAATGGCTTATTTGATATGACCGATGTATTAGATTT
AAATAATTTATAA

Upstream 100 bases:

>100_bases
TATATTGATAATATGGCAGGTATTGTATTTTTATTTTTTGGTTGTGTGCTTGTTTATAACGGCATCAACGAAATAATTCA
TTAATAGAAAAGGAAGTAAC

Downstream 100 bases:

>100_bases
ATCAATTTCAATGTCACTTTCTACGTGACAGCAACATAATAAAATCTCATCAGGTTGAATAAAGGCAAGAGGCATTTCTT
TATAAGACACCTTGCCTTTT

Product: dihydrodipicolinate reductase

Products: NA

Alternate protein names: DHPR [H]

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MTLKIAIAGAGGRMGRQLIQAVHSAEGVELGAAFERKGSSLVGTDAGELAGIGHLGVAVSDDLESQKDKFDLLIDFTRPE
GTLEHIAFCVANNKKMVIGTTGFDENGKTAIKAASDKIAIVFASNFSVGVNLVFKLLEKAAKVMGDYCDIEVIEAHHRHK
VDAPSGTALSMGEHIAKTLGRDLKTHGVFCREGITGERKRDEIGFSTIRASDVVGEHTVWFADIGERVEISHKASSRMTF
ANGAVRAGKWLENKANGLFDMTDVLDLNNL

Sequences:

>Translated_270_residues
MTLKIAIAGAGGRMGRQLIQAVHSAEGVELGAAFERKGSSLVGTDAGELAGIGHLGVAVSDDLESQKDKFDLLIDFTRPE
GTLEHIAFCVANNKKMVIGTTGFDENGKTAIKAASDKIAIVFASNFSVGVNLVFKLLEKAAKVMGDYCDIEVIEAHHRHK
VDAPSGTALSMGEHIAKTLGRDLKTHGVFCREGITGERKRDEIGFSTIRASDVVGEHTVWFADIGERVEISHKASSRMTF
ANGAVRAGKWLENKANGLFDMTDVLDLNNL
>Mature_269_residues
TLKIAIAGAGGRMGRQLIQAVHSAEGVELGAAFERKGSSLVGTDAGELAGIGHLGVAVSDDLESQKDKFDLLIDFTRPEG
TLEHIAFCVANNKKMVIGTTGFDENGKTAIKAASDKIAIVFASNFSVGVNLVFKLLEKAAKVMGDYCDIEVIEAHHRHKV
DAPSGTALSMGEHIAKTLGRDLKTHGVFCREGITGERKRDEIGFSTIRASDVVGEHTVWFADIGERVEISHKASSRMTFA
NGAVRAGKWLENKANGLFDMTDVLDLNNL

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; second step. [C]

COG id: COG0289

COG function: function code E; Dihydrodipicolinate reductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dihydrodipicolinate reductase family [H]

Homologues:

Organism=Escherichia coli, GI1786214, Length=268, Percent_Identity=71.2686567164179, Blast_Score=372, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022663
- InterPro:   IPR000846
- InterPro:   IPR022664
- InterPro:   IPR011770
- InterPro:   IPR016040 [H]

Pfam domain/function: PF05173 DapB_C; PF01113 DapB_N [H]

EC number: =1.3.1.26 [H]

Molecular weight: Translated: 28938; Mature: 28807

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01298 DAPB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKIAIAGAGGRMGRQLIQAVHSAEGVELGAAFERKGSSLVGTDAGELAGIGHLGVAVS
CEEEEEEECCCCHHHHHHHHHHHHCCCCEECHHHHHCCCEEECCCCHHHCCCCCCCEEEC
DDLESQKDKFDLLIDFTRPEGTLEHIAFCVANNKKMVIGTTGFDENGKTAIKAASDKIAI
CCHHCCCCCEEEEEEECCCCCHHHHEEEEEECCCEEEEEECCCCCCCCEEEEECCCEEEE
VFASNFSVGVNLVFKLLEKAAKVMGDYCDIEVIEAHHRHKVDAPSGTALSMGEHIAKTLG
EEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHC
RDLKTHGVFCREGITGERKRDEIGFSTIRASDVVGEHTVWFADIGERVEISHKASSRMTF
CCHHHCCEEEECCCCCCCCHHHCCHHHEEHHHCCCCCEEEEECCCCEEEECCCCCCCEEE
ANGAVRAGKWLENKANGLFDMTDVLDLNNL
CCCCCCCCHHHHHHCCCCEEHHHHHCCCCC
>Mature Secondary Structure 
TLKIAIAGAGGRMGRQLIQAVHSAEGVELGAAFERKGSSLVGTDAGELAGIGHLGVAVS
EEEEEEECCCCHHHHHHHHHHHHCCCCEECHHHHHCCCEEECCCCHHHCCCCCCCEEEC
DDLESQKDKFDLLIDFTRPEGTLEHIAFCVANNKKMVIGTTGFDENGKTAIKAASDKIAI
CCHHCCCCCEEEEEEECCCCCHHHHEEEEEECCCEEEEEECCCCCCCCEEEEECCCEEEE
VFASNFSVGVNLVFKLLEKAAKVMGDYCDIEVIEAHHRHKVDAPSGTALSMGEHIAKTLG
EEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHC
RDLKTHGVFCREGITGERKRDEIGFSTIRASDVVGEHTVWFADIGERVEISHKASSRMTF
CCHHHCCEEEECCCCCCCCHHHCCHHHEEHHHCCCCCEEEEECCCCEEEECCCCCCCEEE
ANGAVRAGKWLENKANGLFDMTDVLDLNNL
CCCCCCCCHHHHHHCCCCEEHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA