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The map label for this gene is 148826923

Identifier: 148826923

GI number: 148826923

Start: 170831

End: 171049

Strand: Reverse

Name: 148826923

Synonym: CGSHiGG_00985

Alternate gene names: NA

Gene position: 171049-170831 (Counterclockwise)

Preceding gene: 148826924

Following gene: 148826922

Centisome position: 9.06

GC content: 38.36

Gene sequence:

>219_bases
ATGCAACATGAAATGGGGTGTGGAAGGGAAAAGAAAATAGAATTGCAAGCGCAAGGATTGCAACCTGATACATTATTTTC
TGATGTTATTAAGCGGTATTTGAACGAAATTACGCCAACAAAGCGTGGAGAAAAGCACGAATTTAATCGGCTGAATCGCT
TTTTGCGCCATCCAGTTACGGATAAATATATATCTGATGTTAGTCGGAGAGATATTTAG

Upstream 100 bases:

>100_bases
TAAAATCAATACGTTACGTTCACATCTGCCATAAAACCCTCATTAATTCCAACCTCAAATATTGCCATTTTTTAAGTATT
TTTATGCATCGATTACGCCA

Downstream 100 bases:

>100_bases
GATTGGATTGCGGAGAGATTGGAAACGGTAAAAAGTGAAAGTGTGCGTCGTGAATTATCTACTATAGGTCATATATTCAA
AATTGCCCTTGAGCGATGGG

Product: dihydroorotate dehydrogenase 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MQHEMGCGREKKIELQAQGLQPDTLFSDVIKRYLNEITPTKRGEKHEFNRLNRFLRHPVTDKYISDVSRRDI

Sequences:

>Translated_72_residues
MQHEMGCGREKKIELQAQGLQPDTLFSDVIKRYLNEITPTKRGEKHEFNRLNRFLRHPVTDKYISDVSRRDI
>Mature_72_residues
MQHEMGCGREKKIELQAQGLQPDTLFSDVIKRYLNEITPTKRGEKHEFNRLNRFLRHPVTDKYISDVSRRDI

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 8585; Mature: 8585

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHEMGCGREKKIELQAQGLQPDTLFSDVIKRYLNEITPTKRGEKHEFNRLNRFLRHPVT
CCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
DKYISDVSRRDI
HHHHHHHHHCCC
>Mature Secondary Structure
MQHEMGCGREKKIELQAQGLQPDTLFSDVIKRYLNEITPTKRGEKHEFNRLNRFLRHPVT
CCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
DKYISDVSRRDI
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]