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The map label for this gene is intQ [C]

Identifier: 148826922

GI number: 148826922

Start: 170153

End: 170812

Strand: Reverse

Name: intQ [C]

Synonym: CGSHiGG_00980

Alternate gene names: 148826922

Gene position: 170812-170153 (Counterclockwise)

Preceding gene: 148826923

Following gene: 148826916

Centisome position: 9.05

GC content: 39.85

Gene sequence:

>660_bases
TTGGAAACGGTAAAAAGTGAAAGTGTGCGTCGTGAATTATCTACTATAGGTCATATATTCAAAATTGCCCTTGAGCGATG
GGGGTATATACAAAAAAGCCCAATGGTCGGCATACAATTACCCGAAAAAGGGAAACCTCGGACTCAGCGAGTAACGGAAG
AAGATATTAATACCATTGTTGCTATCAGTGGATATGTTGATACGCTCAAAACTGCAAAAGCGAGAACCGTTGCAGCTATG
TTGTTTGCCGTTGAAACTGCAATGAGAGCAGGGGAGATTTGTAGTCTTAGTTGGGATAATGTGAATTTTGAGAAACGTAC
TGCATTTTTGCCTATGACAAAAAACGGTACATCAAGAACCGTGCCATTGACTAAAAATGCAATCGCTATTTTAGAACGGT
TAAAAGTCGAGATAGGGGATGCTGGATTGTGTTTTGATATTAAGTCTAGTGTGCTTGATGCAACATTCCGAAAACTCAAA
AAACTTGCCGAGCGAGAATATTTGCATTTCCACGATACGCGGCGTGAGGCATTAACTAGGCTATCTAAAAAAGTAGATGT
GATGACATTAGCCAAAATATCTGGGCATAAAGATATTTCGATTTTACAAAATGTCTATTATGCCCCTGATATGGCGGAGG
TGGCGGAATTACTTGATTAG

Upstream 100 bases:

>100_bases
CGAATTTAATCGGCTGAATCGCTTTTTGCGCCATCCAGTTACGGATAAATATATATCTGATGTTAGTCGGAGAGATATTT
AGGATTGGATTGCGGAGAGA

Downstream 100 bases:

>100_bases
CTAATACGTTTAGCATTGATCCGCCCCCAACGAACAACTTCGCCTGCGATATAGCGTGGGCGAGAATTTTGTTGATCGAC
TGTAACGGGTGTAACGGGTT

Product: integrase/recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
METVKSESVRRELSTIGHIFKIALERWGYIQKSPMVGIQLPEKGKPRTQRVTEEDINTIVAISGYVDTLKTAKARTVAAM
LFAVETAMRAGEICSLSWDNVNFEKRTAFLPMTKNGTSRTVPLTKNAIAILERLKVEIGDAGLCFDIKSSVLDATFRKLK
KLAEREYLHFHDTRREALTRLSKKVDVMTLAKISGHKDISILQNVYYAPDMAEVAELLD

Sequences:

>Translated_219_residues
METVKSESVRRELSTIGHIFKIALERWGYIQKSPMVGIQLPEKGKPRTQRVTEEDINTIVAISGYVDTLKTAKARTVAAM
LFAVETAMRAGEICSLSWDNVNFEKRTAFLPMTKNGTSRTVPLTKNAIAILERLKVEIGDAGLCFDIKSSVLDATFRKLK
KLAEREYLHFHDTRREALTRLSKKVDVMTLAKISGHKDISILQNVYYAPDMAEVAELLD
>Mature_219_residues
METVKSESVRRELSTIGHIFKIALERWGYIQKSPMVGIQLPEKGKPRTQRVTEEDINTIVAISGYVDTLKTAKARTVAAM
LFAVETAMRAGEICSLSWDNVNFEKRTAFLPMTKNGTSRTVPLTKNAIAILERLKVEIGDAGLCFDIKSSVLDATFRKLK
KLAEREYLHFHDTRREALTRLSKKVDVMTLAKISGHKDISILQNVYYAPDMAEVAELLD

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome (By Similarity). [C]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 24646; Mature: 24646

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METVKSESVRRELSTIGHIFKIALERWGYIQKSPMVGIQLPEKGKPRTQRVTEEDINTIV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHCCHHHHHEEE
AISGYVDTLKTAKARTVAAMLFAVETAMRAGEICSLSWDNVNFEKRTAFLPMTKNGTSRT
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHEEEEEECCCCCCCC
VPLTKNAIAILERLKVEIGDAGLCFDIKSSVLDATFRKLKKLAEREYLHFHDTRREALTR
CCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSKKVDVMTLAKISGHKDISILQNVYYAPDMAEVAELLD
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHC
>Mature Secondary Structure
METVKSESVRRELSTIGHIFKIALERWGYIQKSPMVGIQLPEKGKPRTQRVTEEDINTIV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHCCHHHHHEEE
AISGYVDTLKTAKARTVAAMLFAVETAMRAGEICSLSWDNVNFEKRTAFLPMTKNGTSRT
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHEEEEEECCCCCCCC
VPLTKNAIAILERLKVEIGDAGLCFDIKSSVLDATFRKLKKLAEREYLHFHDTRREALTR
CCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSKKVDVMTLAKISGHKDISILQNVYYAPDMAEVAELLD
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]