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The map label for this gene is cmoB [H]

Identifier: 148826824

GI number: 148826824

Start: 67395

End: 68360

Strand: Reverse

Name: cmoB [H]

Synonym: CGSHiGG_00400

Alternate gene names: 148826824

Gene position: 68360-67395 (Counterclockwise)

Preceding gene: 148826825

Following gene: 148826822

Centisome position: 3.62

GC content: 39.54

Gene sequence:

>966_bases
ATGATCGACTTTCGCCCTTTTTATCAACAAATTGCTACTACAAATTTATCGGACTGGTTAGAAACCTTACCACTCCAATT
GAAAGAATGGGAAACTCAAACTCATGGCGATTATGCGAAGTGGAGCAAAATTGTTGATTTTTTGCCTGATTTACATGCTG
ATGAAATCGATCTAAAAAGTGCGGTGAAATCTGACCGCACTTCTCCCCTTTCAGAAGGTGAAAAACAACGAATTATCCAT
CATTTAAAACAATTAATGCCGTGGCGAAAAGGACCTTATCATCTTTTCGGCATTCATGTAGATTGTGAATGGCGTTCAGA
TTTTAAATGGGATCGTGTTCTTCCTCATTTAGCTCCACTGCAAGGTCGAACTATTTTAGATGTGGGCTGTGGCAGCGGTT
ATCATATGTGGAGAATGGTAGGCGAAGGCGCAAAAATGGTGGTCGGGATTGATCCTACTGAGCTTTTCCTTTGCCAATTT
GAAGCTGTACGCAAACTGCTTAATAATGATCGTCGAGCAAATCTTATCCCGCTAGGTATTGAGCAGATGCAACCATTAGC
GGCATTTGACACTGTATTTTCAATGGGCGTACTCTATCATCGTAAATCCCCATTAGATCATTTAAGCCAATTGAAAAATC
AATTGGTAAAAGGTGGCGAATTGGTATTAGAAACGTTAGTGGTGGATGGCGATGTAAATACTGTACTCGTACCGATAGAT
CGCTATGCGAAAATGAAAAATGTTTATTTTATTCCCTCTGTCGCTGCACTAATTAACTGGCTAGAAAAAGTTGGCTTTAC
CAACGTACGTTGTGTGGATGTAGCGACAACTACATTAGAAGAACAGCGTAAAACTGATTGGTTGGAAAATGAAAGCCTGA
TTGATTTTTTAGATCCAAATGATCACAGTAAAACCATTGAAGGTTATCACGCACCGAAAAGAGCGGTAATTTTAGCGAAC
AAATAA

Upstream 100 bases:

>100_bases
CCAGCCTTGCAATTATTGTTATTTCATTACTTTCCAATAAACCAGAACAAGATATTCTTAATACCTTTGATAAAGCAGAA
AAGGCTTATAAGGAAGCAAA

Downstream 100 bases:

>100_bases
AAAAGGGAATTATTCCTTTTTTATTTTACTCGCATTTCATATTTACAAAGAATAATACTCTAATTCTACTGAAGTTAATG
TGGATAATAAGGTTTCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MIDFRPFYQQIATTNLSDWLETLPLQLKEWETQTHGDYAKWSKIVDFLPDLHADEIDLKSAVKSDRTSPLSEGEKQRIIH
HLKQLMPWRKGPYHLFGIHVDCEWRSDFKWDRVLPHLAPLQGRTILDVGCGSGYHMWRMVGEGAKMVVGIDPTELFLCQF
EAVRKLLNNDRRANLIPLGIEQMQPLAAFDTVFSMGVLYHRKSPLDHLSQLKNQLVKGGELVLETLVVDGDVNTVLVPID
RYAKMKNVYFIPSVAALINWLEKVGFTNVRCVDVATTTLEEQRKTDWLENESLIDFLDPNDHSKTIEGYHAPKRAVILAN
K

Sequences:

>Translated_321_residues
MIDFRPFYQQIATTNLSDWLETLPLQLKEWETQTHGDYAKWSKIVDFLPDLHADEIDLKSAVKSDRTSPLSEGEKQRIIH
HLKQLMPWRKGPYHLFGIHVDCEWRSDFKWDRVLPHLAPLQGRTILDVGCGSGYHMWRMVGEGAKMVVGIDPTELFLCQF
EAVRKLLNNDRRANLIPLGIEQMQPLAAFDTVFSMGVLYHRKSPLDHLSQLKNQLVKGGELVLETLVVDGDVNTVLVPID
RYAKMKNVYFIPSVAALINWLEKVGFTNVRCVDVATTTLEEQRKTDWLENESLIDFLDPNDHSKTIEGYHAPKRAVILAN
K
>Mature_321_residues
MIDFRPFYQQIATTNLSDWLETLPLQLKEWETQTHGDYAKWSKIVDFLPDLHADEIDLKSAVKSDRTSPLSEGEKQRIIH
HLKQLMPWRKGPYHLFGIHVDCEWRSDFKWDRVLPHLAPLQGRTILDVGCGSGYHMWRMVGEGAKMVVGIDPTELFLCQF
EAVRKLLNNDRRANLIPLGIEQMQPLAAFDTVFSMGVLYHRKSPLDHLSQLKNQLVKGGELVLETLVVDGDVNTVLVPID
RYAKMKNVYFIPSVAALINWLEKVGFTNVRCVDVATTTLEEQRKTDWLENESLIDFLDPNDHSKTIEGYHAPKRAVILAN
K

Specific function: Catalyzes the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at position 34 in tRNA [H]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoB family [H]

Homologues:

Organism=Escherichia coli, GI1788178, Length=322, Percent_Identity=65.2173913043478, Blast_Score=444, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010017 [H]

Pfam domain/function: PF08003 Methyltransf_9 [H]

EC number: NA

Molecular weight: Translated: 36857; Mature: 36857

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFRPFYQQIATTNLSDWLETLPLQLKEWETQTHGDYAKWSKIVDFLPDLHADEIDLKS
CCCCHHHHHHHHHCCHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHH
AVKSDRTSPLSEGEKQRIIHHLKQLMPWRKGPYHLFGIHVDCEWRSDFKWDRVLPHLAPL
HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCHHHHCCCCCCC
QGRTILDVGCGSGYHMWRMVGEGAKMVVGIDPTELFLCQFEAVRKLLNNDRRANLIPLGI
CCCEEEEECCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEECH
EQMQPLAAFDTVFSMGVLYHRKSPLDHLSQLKNQLVKGGELVLETLVVDGDVNTVLVPID
HHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHEEHHHEECCCCCEEEEECH
RYAKMKNVYFIPSVAALINWLEKVGFTNVRCVDVATTTLEEQRKTDWLENESLIDFLDPN
HHHHHCCEEECHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEECCCC
DHSKTIEGYHAPKRAVILANK
CCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MIDFRPFYQQIATTNLSDWLETLPLQLKEWETQTHGDYAKWSKIVDFLPDLHADEIDLKS
CCCCHHHHHHHHHCCHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHH
AVKSDRTSPLSEGEKQRIIHHLKQLMPWRKGPYHLFGIHVDCEWRSDFKWDRVLPHLAPL
HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCHHHHCCCCCCC
QGRTILDVGCGSGYHMWRMVGEGAKMVVGIDPTELFLCQFEAVRKLLNNDRRANLIPLGI
CCCEEEEECCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEECH
EQMQPLAAFDTVFSMGVLYHRKSPLDHLSQLKNQLVKGGELVLETLVVDGDVNTVLVPID
HHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHEEHHHEECCCCCEEEEECH
RYAKMKNVYFIPSVAALINWLEKVGFTNVRCVDVATTTLEEQRKTDWLENESLIDFLDPN
HHHHHCCEEECHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEECCCC
DHSKTIEGYHAPKRAVILANK
CCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA