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The map label for this gene is ybeQ [H]

Identifier: 148826779

GI number: 148826779

Start: 17164

End: 18360

Strand: Direct

Name: ybeQ [H]

Synonym: CGSHiGG_00130

Alternate gene names: 148826779

Gene position: 17164-18360 (Clockwise)

Preceding gene: 148826778

Following gene: 148826780

Centisome position: 0.91

GC content: 43.61

Gene sequence:

>1197_bases
ATGCGATTCACAAAAACACTTTTTACCACCGCACTTTTCGGTGCTTCTGTATTTTCTTTTCAATCCACGGCTTGGGCAAT
AGAACAAAACCAAATGATTCAAGTTGAGCAGCTATATAAGCAAAAAGACTTCAAAGCGATGTTGGCAATTCTTCAACCCT
TAGCTGAGCAAGGTGATGCGATCGCCCAATTTCTTTTGGGAGGTATGTATGAAGAGGGGCGTGGCGTAAAACAAGATGAT
TTTGAAGCGGTGAAATGGTATCGCAAAGCGGCAGAGCAGGGATATGCAGATGCTCAATTTAATTTGGGTGTGATGTATGA
ACGCGGACGTGGCGTAAGACAAGATGTTTTTGAAGCGGTGAAATGGTATCGCAAAGCGGCGGAGCAGGGAAATGCAAGTG
TTCAATTTAATTTGGGCTTGATGTATAGCAAAGGACAAGGAGTAAAACAAGATGATTTTGAAGCGGTGAAATGGTATCGC
AAAGCGGCGGAGCAAGGACATGCAAAGGCTCAATATAATTTGGGTAATATGTATGCCAATGGACGTGGCGTAAAACAAGA
TGGTTTTGAAGCGGTGAAATGGTATCGCAAAGCGGCGGAGCAGGGATATGCGGATGCTCAATTTAATTTGGGCAATATGT
ATTACAACGGGCATGGAGTAAAACAAGATGATGTTGAAGCGGTGAAATGGTATCGCAAAGCGGCGGAGCAAGGACATGCA
AAGGCTCAATATAATTTGGGTAATATGTATGCCAATGGACGTGGCGTAAAACAAGATTATTTTGAAACGGTGAAATGGTA
TCGCAAAGCGGCGGAGCAGGGGGAGGCAAAGGCTCAATTTAATTTGGGCGTGATGTATGCTAAGGGACGTGGCGTAAAAC
AAGATTATTTTGAAGCGGTGAAATGGTATCGCAAAGCGGCGGAGCAGGGGTATGCAGATGCTCAATTAAATTTGGGCAAT
ATGTATGCTAAGGGACTAGGTGTCAAACAAGATGATGTTGAAGCGGTGAAATGGTATCGCAAAGCGGCGGAGCAGGGAGA
TGCAGATGCTCAAGCTCTATTGGGATTCGCATATCTTTTAGGAAAAGGCGTTCAATTCAATAAATCTTTAGCTAAAGAAT
GGCTTGGCAAGGCTTGTGATAATGGTCATCAAGCTGGTTGCGAATATTATGGCAAGCTAAATAGAGGGGAATTGTAA

Upstream 100 bases:

>100_bases
CTGGGTGTTGTACTCTCTGTAAAGAGAGTACAACAAAACATAATGCTAAACAAAAAAAGTTTGGTTGTTTCAATTGTTGA
TTAATAAATGGACGATTTCT

Downstream 100 bases:

>100_bases
TAATGAAAAATTGGCAATTTAAACTTGTAAGTGGAATTGTCGTTTTATTTTGTTTGCTCTACTTTAATGCCGTGATGCAT
TATGGTGCCGATAAAACATT

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MRFTKTLFTTALFGASVFSFQSTAWAIEQNQMIQVEQLYKQKDFKAMLAILQPLAEQGDAIAQFLLGGMYEEGRGVKQDD
FEAVKWYRKAAEQGYADAQFNLGVMYERGRGVRQDVFEAVKWYRKAAEQGNASVQFNLGLMYSKGQGVKQDDFEAVKWYR
KAAEQGHAKAQYNLGNMYANGRGVKQDGFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDVEAVKWYRKAAEQGHA
KAQYNLGNMYANGRGVKQDYFETVKWYRKAAEQGEAKAQFNLGVMYAKGRGVKQDYFEAVKWYRKAAEQGYADAQLNLGN
MYAKGLGVKQDDVEAVKWYRKAAEQGDADAQALLGFAYLLGKGVQFNKSLAKEWLGKACDNGHQAGCEYYGKLNRGEL

Sequences:

>Translated_398_residues
MRFTKTLFTTALFGASVFSFQSTAWAIEQNQMIQVEQLYKQKDFKAMLAILQPLAEQGDAIAQFLLGGMYEEGRGVKQDD
FEAVKWYRKAAEQGYADAQFNLGVMYERGRGVRQDVFEAVKWYRKAAEQGNASVQFNLGLMYSKGQGVKQDDFEAVKWYR
KAAEQGHAKAQYNLGNMYANGRGVKQDGFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDVEAVKWYRKAAEQGHA
KAQYNLGNMYANGRGVKQDYFETVKWYRKAAEQGEAKAQFNLGVMYAKGRGVKQDYFEAVKWYRKAAEQGYADAQLNLGN
MYAKGLGVKQDDVEAVKWYRKAAEQGDADAQALLGFAYLLGKGVQFNKSLAKEWLGKACDNGHQAGCEYYGKLNRGEL
>Mature_398_residues
MRFTKTLFTTALFGASVFSFQSTAWAIEQNQMIQVEQLYKQKDFKAMLAILQPLAEQGDAIAQFLLGGMYEEGRGVKQDD
FEAVKWYRKAAEQGYADAQFNLGVMYERGRGVRQDVFEAVKWYRKAAEQGNASVQFNLGLMYSKGQGVKQDDFEAVKWYR
KAAEQGHAKAQYNLGNMYANGRGVKQDGFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDVEAVKWYRKAAEQGHA
KAQYNLGNMYANGRGVKQDYFETVKWYRKAAEQGEAKAQFNLGVMYAKGRGVKQDYFEAVKWYRKAAEQGYADAQLNLGN
MYAKGLGVKQDDVEAVKWYRKAAEQGDADAQALLGFAYLLGKGVQFNKSLAKEWLGKACDNGHQAGCEYYGKLNRGEL

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=346, Percent_Identity=32.9479768786127, Blast_Score=149, Evalue=4e-36,
Organism=Homo sapiens, GI151301150, Length=334, Percent_Identity=33.8323353293413, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI217330658, Length=241, Percent_Identity=28.2157676348548, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI217330656, Length=241, Percent_Identity=28.2157676348548, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI33620759, Length=330, Percent_Identity=29.0909090909091, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI154689719, Length=275, Percent_Identity=30.5454545454545, Blast_Score=75, Evalue=8e-14,
Organism=Escherichia coli, GI87081769, Length=296, Percent_Identity=42.2297297297297, Blast_Score=199, Evalue=3e-52,
Organism=Escherichia coli, GI1786867, Length=123, Percent_Identity=43.0894308943089, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1790515, Length=210, Percent_Identity=30.952380952381, Blast_Score=76, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17563256, Length=318, Percent_Identity=31.1320754716981, Blast_Score=134, Evalue=8e-32,
Organism=Saccharomyces cerevisiae, GI6319410, Length=331, Percent_Identity=29.9093655589124, Blast_Score=98, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6319998, Length=371, Percent_Identity=26.9541778975741, Blast_Score=93, Evalue=6e-20,
Organism=Drosophila melanogaster, GI21355295, Length=347, Percent_Identity=32.8530259365994, Blast_Score=141, Evalue=7e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 44999; Mature: 44999

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFTKTLFTTALFGASVFSFQSTAWAIEQNQMIQVEQLYKQKDFKAMLAILQPLAEQGDA
CCHHHHHHHHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAQFLLGGMYEEGRGVKQDDFEAVKWYRKAAEQGYADAQFNLGVMYERGRGVRQDVFEAV
HHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCEEEEECCCCHHHHHHHHH
KWYRKAAEQGNASVQFNLGLMYSKGQGVKQDDFEAVKWYRKAAEQGHAKAQYNLGNMYAN
HHHHHHHHCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCEEEC
GRGVKQDGFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDVEAVKWYRKAAEQGHA
CCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCEEECCCCCCHHHHHHHHHHHHHHHCCCC
KAQYNLGNMYANGRGVKQDYFETVKWYRKAAEQGEAKAQFNLGVMYAKGRGVKQDYFEAV
EEEECCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHH
KWYRKAAEQGYADAQLNLGNMYAKGLGVKQDDVEAVKWYRKAAEQGDADAQALLGFAYLL
HHHHHHHHCCCCCCEECCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GKGVQFNKSLAKEWLGKACDNGHQAGCEYYGKLNRGEL
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRFTKTLFTTALFGASVFSFQSTAWAIEQNQMIQVEQLYKQKDFKAMLAILQPLAEQGDA
CCHHHHHHHHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAQFLLGGMYEEGRGVKQDDFEAVKWYRKAAEQGYADAQFNLGVMYERGRGVRQDVFEAV
HHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCEEEEECCCCHHHHHHHHH
KWYRKAAEQGNASVQFNLGLMYSKGQGVKQDDFEAVKWYRKAAEQGHAKAQYNLGNMYAN
HHHHHHHHCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCEEEC
GRGVKQDGFEAVKWYRKAAEQGYADAQFNLGNMYYNGHGVKQDDVEAVKWYRKAAEQGHA
CCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCEEECCCCCCHHHHHHHHHHHHHHHCCCC
KAQYNLGNMYANGRGVKQDYFETVKWYRKAAEQGEAKAQFNLGVMYAKGRGVKQDYFEAV
EEEECCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHH
KWYRKAAEQGYADAQLNLGNMYAKGLGVKQDDVEAVKWYRKAAEQGDADAQALLGFAYLL
HHHHHHHHCCCCCCEECCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GKGVQFNKSLAKEWLGKACDNGHQAGCEYYGKLNRGEL
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]