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The map label for this gene is yfcM [C]

Identifier: 148826778

GI number: 148826778

Start: 16426

End: 16962

Strand: Direct

Name: yfcM [C]

Synonym: CGSHiGG_00125

Alternate gene names: 148826778

Gene position: 16426-16962 (Clockwise)

Preceding gene: 148826777

Following gene: 148826779

Centisome position: 0.87

GC content: 40.97

Gene sequence:

>537_bases
ATGGAACATAAATTAGAAGATATTATTGCAATTTTTAATCAATGTTTTGAAGAGGAATACAACACTCTCTTAGTCAAAGG
CGGTGATGAGCCTATTTATTTACCCGCAAATGATGAAGTGCCTTATAACGCGATTTATTTTGCGCGAGGATTTTACAGCA
GTGCATTGCACGAAATTGCCCATTGGTTAGTGGCAGGCAAAGAACGCCGTAAACTAGAAGATTTTGGTTATTGGTATGAG
CCAGATGGACGTTCTGAAGAACGCCAGCGTGACTTTGAAAAAGTTGAAGTTAAACCGCAAGCATTAGAATGGATTTTGGC
AACGGCGGCAGGTTTTCGTTATTTTGCCAGCGCGGATAATTTGAATGGCAATCCGGGCGATACACAGCCTTTTAAACAAG
CCGTGTATGAACAAGTGAAAATCTATGCGGAAAAAGGTTTACCAAAACGAGCGGAAATGTTACGCAAGGCGTTAGTGGCA
TTTTATGGCACAGAAGATGAAATTGATCTGGCGAAGTTTGATGTCGCGCGTATTTAA

Upstream 100 bases:

>100_bases
CAAAACCGTTAATACTACATGTCAATTTACCTGAAGAAAATAAACAAGAACAAATGAGCCTCTGGTGATATAATCTTGCG
GTTTTTTAGGAGTCGATACT

Downstream 100 bases:

>100_bases
TAGCAGAAAGTGAGCAAAATTGCTCACTTTTTTCAGTCTTAAGCCCCCCAATTCCCTCCTAATTAAATAGTTCAATTTTT
AATCATTTCACACCCAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MEHKLEDIIAIFNQCFEEEYNTLLVKGGDEPIYLPANDEVPYNAIYFARGFYSSALHEIAHWLVAGKERRKLEDFGYWYE
PDGRSEERQRDFEKVEVKPQALEWILATAAGFRYFASADNLNGNPGDTQPFKQAVYEQVKIYAEKGLPKRAEMLRKALVA
FYGTEDEIDLAKFDVARI

Sequences:

>Translated_178_residues
MEHKLEDIIAIFNQCFEEEYNTLLVKGGDEPIYLPANDEVPYNAIYFARGFYSSALHEIAHWLVAGKERRKLEDFGYWYE
PDGRSEERQRDFEKVEVKPQALEWILATAAGFRYFASADNLNGNPGDTQPFKQAVYEQVKIYAEKGLPKRAEMLRKALVA
FYGTEDEIDLAKFDVARI
>Mature_178_residues
MEHKLEDIIAIFNQCFEEEYNTLLVKGGDEPIYLPANDEVPYNAIYFARGFYSSALHEIAHWLVAGKERRKLEDFGYWYE
PDGRSEERQRDFEKVEVKPQALEWILATAAGFRYFASADNLNGNPGDTQPFKQAVYEQVKIYAEKGLPKRAEMLRKALVA
FYGTEDEIDLAKFDVARI

Specific function: Unknown

COG id: COG3101

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfcM [H]

Homologues:

Organism=Escherichia coli, GI1788666, Length=163, Percent_Identity=54.601226993865, Blast_Score=187, Evalue=4e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007411 [H]

Pfam domain/function: PF04315 DUF462 [H]

EC number: NA

Molecular weight: Translated: 20599; Mature: 20599

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHKLEDIIAIFNQCFEEEYNTLLVKGGDEPIYLPANDEVPYNAIYFARGFYSSALHEIA
CCHHHHHHHHHHHHHHHHHHCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
HWLVAGKERRKLEDFGYWYEPDGRSEERQRDFEKVEVKPQALEWILATAAGFRYFASADN
HHHHCCHHHHHHHHCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
LNGNPGDTQPFKQAVYEQVKIYAEKGLPKRAEMLRKALVAFYGTEDEIDLAKFDVARI
CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MEHKLEDIIAIFNQCFEEEYNTLLVKGGDEPIYLPANDEVPYNAIYFARGFYSSALHEIA
CCHHHHHHHHHHHHHHHHHHCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
HWLVAGKERRKLEDFGYWYEPDGRSEERQRDFEKVEVKPQALEWILATAAGFRYFASADN
HHHHCCHHHHHHHHCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
LNGNPGDTQPFKQAVYEQVKIYAEKGLPKRAEMLRKALVAFYGTEDEIDLAKFDVARI
CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]