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The map label for this gene is rpmA [C]

Identifier: 148826477

GI number: 148826477

Start: 1516448

End: 1517344

Strand: Direct

Name: rpmA [C]

Synonym: CGSHiEE_07640

Alternate gene names: 148826477

Gene position: 1516448-1517344 (Clockwise)

Preceding gene: 148826476

Following gene: 148826478

Centisome position: 83.64

GC content: 35.79

Gene sequence:

>897_bases
ATGAAACAACAACCTTTATTAGGCTTTACCTTTGCGCTTATTACCGCTATGGCTTGGGGGTCATTGCCTATTGCCTTGAA
ACAAGTTTTGTCTGTAATGAATGCGCAAACTATCGTATGGTATCGTTTCATTATTGCTGCAGTTTCATTATTGGCTTTAC
TTGCTTATAAAAAACAATTACCTGAATTAATGAAAGTTCGCCAATATGCGTGGATTATGCTTATTGGAGTAATTGGTCTT
ACTGGCAATTTTCTATTATTTAGTAGCTCGCTGAATTACATTGAACCGTCAGTTGCACAAATTTTTATTCATTTATCCTC
TTTTGGAATGCTCATCTGTGGTGTACTGATTTTCAAAGAAAAATTAGGGTTGCACCAAAAGATCGGACTTTTCTTATTAT
TAATTGGTTTAGGCTTATTCTTTAATGATCGTTTTGATGCATTTGCTGGACTAAATCAGTATTCAACAGGTGTCATTTTA
GGTGTAGGGGGTGCTCTTATTTGGGTCGCTTATGGAATGGCGCAAAAATTAATGTTACGTAAATTTAATTCACAACAAAT
CTTGCTAATGATGTATTTAGGTTGTGCCATAGTCTTTATGCCGATGGTTGAATTTTCGCAAGTACAAGAACTCACACCTT
TAGCTCTGATTTGTTTTATTTACTGCTGTTTAAATACCTTAATTGGATACGGCTCTTATGCGGAAGCACTTAATCGTTGG
GATGTATCAAAAGTCAGTGTTGTTATCACACTTGTACCTCTTTTCACGATCCTATTTTCTCATATTGCGCATTATTTTAG
CCCAGCAGATTTCGCGGCACCAGAATTGAATAATATTAGCTATATTGGTGCATTTGTTGTAGTATGCGGGGCAATTTTTA
TCCGCAATTGGACATAA

Upstream 100 bases:

>100_bases
TAAGTATTGTTACTGAATAATTTAAAATCTATTCCATTGAAACGCCCTACAATTTTGTGGGGCGTTTTGTCTTTTTTAAT
TTCACATAAGCGAGCAAGCA

Downstream 100 bases:

>100_bases
ATTATTACCGCATAAAACTCATTAAAGTGCGGTTTATTTTGGAGAAGTTTGAATGAAATTTATTGATGAATCCCTTATTC
GAATTGAGGCTGGAGATGGT

Product: 50S ribosomal protein L27

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MKQQPLLGFTFALITAMAWGSLPIALKQVLSVMNAQTIVWYRFIIAAVSLLALLAYKKQLPELMKVRQYAWIMLIGVIGL
TGNFLLFSSSLNYIEPSVAQIFIHLSSFGMLICGVLIFKEKLGLHQKIGLFLLLIGLGLFFNDRFDAFAGLNQYSTGVIL
GVGGALIWVAYGMAQKLMLRKFNSQQILLMMYLGCAIVFMPMVEFSQVQELTPLALICFIYCCLNTLIGYGSYAEALNRW
DVSKVSVVITLVPLFTILFSHIAHYFSPADFAAPELNNISYIGAFVVVCGAIFIRNWT

Sequences:

>Translated_298_residues
MKQQPLLGFTFALITAMAWGSLPIALKQVLSVMNAQTIVWYRFIIAAVSLLALLAYKKQLPELMKVRQYAWIMLIGVIGL
TGNFLLFSSSLNYIEPSVAQIFIHLSSFGMLICGVLIFKEKLGLHQKIGLFLLLIGLGLFFNDRFDAFAGLNQYSTGVIL
GVGGALIWVAYGMAQKLMLRKFNSQQILLMMYLGCAIVFMPMVEFSQVQELTPLALICFIYCCLNTLIGYGSYAEALNRW
DVSKVSVVITLVPLFTILFSHIAHYFSPADFAAPELNNISYIGAFVVVCGAIFIRNWT
>Mature_298_residues
MKQQPLLGFTFALITAMAWGSLPIALKQVLSVMNAQTIVWYRFIIAAVSLLALLAYKKQLPELMKVRQYAWIMLIGVIGL
TGNFLLFSSSLNYIEPSVAQIFIHLSSFGMLICGVLIFKEKLGLHQKIGLFLLLIGLGLFFNDRFDAFAGLNQYSTGVIL
GVGGALIWVAYGMAQKLMLRKFNSQQILLMMYLGCAIVFMPMVEFSQVQELTPLALICFIYCCLNTLIGYGSYAEALNRW
DVSKVSVVITLVPLFTILFSHIAHYFSPADFAAPELNNISYIGAFVVVCGAIFIRNWT

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1789575, Length=296, Percent_Identity=48.3108108108108, Blast_Score=275, Evalue=3e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33204; Mature: 33204

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKQQPLLGFTFALITAMAWGSLPIALKQVLSVMNAQTIVWYRFIIAAVSLLALLAYKKQL
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PELMKVRQYAWIMLIGVIGLTGNFLLFSSSLNYIEPSVAQIFIHLSSFGMLICGVLIFKE
HHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHH
KLGLHQKIGLFLLLIGLGLFFNDRFDAFAGLNQYSTGVILGVGGALIWVAYGMAQKLMLR
HHCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHCCCEEEECHHHHHHHHHHHHHHHHHH
KFNSQQILLMMYLGCAIVFMPMVEFSQVQELTPLALICFIYCCLNTLIGYGSYAEALNRW
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
DVSKVSVVITLVPLFTILFSHIAHYFSPADFAAPELNNISYIGAFVVVCGAIFIRNWT
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]