| Definition | Haemophilus influenzae PittEE chromosome, complete genome. |
|---|---|
| Accession | NC_009566 |
| Length | 1,813,033 |
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The map label for this gene is dppD [H]
Identifier: 148826206
GI number: 148826206
Start: 1215959
End: 1216951
Strand: Direct
Name: dppD [H]
Synonym: CGSHiEE_06125
Alternate gene names: 148826206
Gene position: 1215959-1216951 (Clockwise)
Preceding gene: 148826205
Following gene: 148826207
Centisome position: 67.07
GC content: 43.0
Gene sequence:
>993_bases ATGGCATTATTAGACGTAAAAGAACTTTCTGTTCACTTTGGCGACAAAAAAACGCCATTTAAAGCAGTGGATCGCATCAG CTATCAAGTCGCACAAGGCGAAGTGCTTGGCATTGTGGGAGAATCAGGTTCGGGTAAATCTGTGAGTTCGCTCGCTATTA TGGGATTAATTGATCATCCTGGGCGTGTATCGGCAGAATCCTTGCAATTTGAAAACACTAATTTACTCACTTTGGATAAT AAAGCCAAACGCCAGCTTATTGGTGCTGATGTCGCAATGATTTTCCAAGATCCGATGACAAGCTTGAATCCTGCTTATAC TGTGGGTTTCCAAATTATGGAAGCGTTAAAAACTCACGAGGGTGGCACAAAAAGGGCGAGAAAAGACCGCACTTTAGAGC TTTTAAGATTGGTCGGTATTCCTGATCCTGAATCTCGAATGAATGTTTATCCCCATCAACTTTCTGGCGGTATGAGCCAA CGTGTGATGATTGCGATGGCAATTGCCTGCAGACCTAAATTATTGATTGCTGACGAACCAACCACCGCATTGGACGTGAC TATTCAAGCACAAATTATGGAACTCTTACTTGAATTGCAAAAGAAAGAATGTATGTCCCTAATTTTGATTACTCACGATC TAGCACTTGTGGCAGAAGCAGCAGATCGCATTATCGTGATGTATGCTGGACAAATCGTTGAAGAAGGCACAGCAAAAGAT ATTTTCCGCGAGCCAAAACATCCTTACACGCAAGCCTTGTTACGTTCATTACCTGAATTTGCAGAAGGAAAATCTCGCTT AGCGTCATTACAAGGTGTGGTACCTGGAAAATACGATCGCCCAACAGGCTGTTTATTAAATCCTCGCTGCCCTTATGCCA CCGAATATTGTCGCCAAGTTGAACCTCAATTGCATCATATCGGTTCGCGTAAAGTAAAATGCCATACTCCGCTGAACGAG CAAGGCAATCCCGTTGAATATCAAGGAGCTTAA
Upstream 100 bases:
>100_bases TCCCGGTTTAGTGATTTTATCTTTGGTATTAGCTTTCAACTTAATGGGCGATGGCTTGCGTGATGCCCTTGATCCAAAAC TCAAACAATAGGAAAACAGA
Downstream 100 bases:
>100_bases TAATGACGAATGAAGTAAAAGAAAATACGCCATTATTAAATGCGATTGGCTTAAAAAAATATTACCCTGTAAAAAAAGGC TTGTTTGCAAAACCACAGCA
Product: dipeptide transporter ATP-binding subunit
Products: ADP; phosphate; dipeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MALLDVKELSVHFGDKKTPFKAVDRISYQVAQGEVLGIVGESGSGKSVSSLAIMGLIDHPGRVSAESLQFENTNLLTLDN KAKRQLIGADVAMIFQDPMTSLNPAYTVGFQIMEALKTHEGGTKRARKDRTLELLRLVGIPDPESRMNVYPHQLSGGMSQ RVMIAMAIACRPKLLIADEPTTALDVTIQAQIMELLLELQKKECMSLILITHDLALVAEAADRIIVMYAGQIVEEGTAKD IFREPKHPYTQALLRSLPEFAEGKSRLASLQGVVPGKYDRPTGCLLNPRCPYATEYCRQVEPQLHHIGSRKVKCHTPLNE QGNPVEYQGA
Sequences:
>Translated_330_residues MALLDVKELSVHFGDKKTPFKAVDRISYQVAQGEVLGIVGESGSGKSVSSLAIMGLIDHPGRVSAESLQFENTNLLTLDN KAKRQLIGADVAMIFQDPMTSLNPAYTVGFQIMEALKTHEGGTKRARKDRTLELLRLVGIPDPESRMNVYPHQLSGGMSQ RVMIAMAIACRPKLLIADEPTTALDVTIQAQIMELLLELQKKECMSLILITHDLALVAEAADRIIVMYAGQIVEEGTAKD IFREPKHPYTQALLRSLPEFAEGKSRLASLQGVVPGKYDRPTGCLLNPRCPYATEYCRQVEPQLHHIGSRKVKCHTPLNE QGNPVEYQGA >Mature_329_residues ALLDVKELSVHFGDKKTPFKAVDRISYQVAQGEVLGIVGESGSGKSVSSLAIMGLIDHPGRVSAESLQFENTNLLTLDNK AKRQLIGADVAMIFQDPMTSLNPAYTVGFQIMEALKTHEGGTKRARKDRTLELLRLVGIPDPESRMNVYPHQLSGGMSQR VMIAMAIACRPKLLIADEPTTALDVTIQAQIMELLLELQKKECMSLILITHDLALVAEAADRIIVMYAGQIVEEGTAKDI FREPKHPYTQALLRSLPEFAEGKSRLASLQGVVPGKYDRPTGCLLNPRCPYATEYCRQVEPQLHHIGSRKVKCHTPLNEQ GNPVEYQGA
Specific function: Part of the binding-protein-dependent transport system for dipeptides. Probably responsible for energy coupling to the transport system [H]
COG id: COG0444
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI42490749, Length=242, Percent_Identity=28.099173553719, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI9665248, Length=227, Percent_Identity=29.9559471365639, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI9961252, Length=242, Percent_Identity=28.5123966942149, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI4505771, Length=242, Percent_Identity=28.5123966942149, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI9961250, Length=242, Percent_Identity=28.5123966942149, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI148612844, Length=226, Percent_Identity=26.9911504424779, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI21536378, Length=238, Percent_Identity=26.0504201680672, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI255708477, Length=227, Percent_Identity=26.8722466960352, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1789963, Length=325, Percent_Identity=74.1538461538462, Blast_Score=501, Evalue=1e-143, Organism=Escherichia coli, GI48994883, Length=320, Percent_Identity=46.5625, Blast_Score=285, Evalue=3e-78, Organism=Escherichia coli, GI1787548, Length=327, Percent_Identity=43.1192660550459, Blast_Score=273, Evalue=1e-74, Organism=Escherichia coli, GI145693107, Length=273, Percent_Identity=47.985347985348, Blast_Score=253, Evalue=9e-69, Organism=Escherichia coli, GI1787759, Length=318, Percent_Identity=39.937106918239, Blast_Score=247, Evalue=6e-67, Organism=Escherichia coli, GI1788506, Length=258, Percent_Identity=46.8992248062016, Blast_Score=224, Evalue=7e-60, Organism=Escherichia coli, GI1787500, Length=326, Percent_Identity=38.9570552147239, Blast_Score=219, Evalue=2e-58, Organism=Escherichia coli, GI1789962, Length=329, Percent_Identity=35.5623100303951, Blast_Score=205, Evalue=4e-54, Organism=Escherichia coli, GI1787758, Length=326, Percent_Identity=34.0490797546012, Blast_Score=184, Evalue=8e-48, Organism=Escherichia coli, GI48994997, Length=244, Percent_Identity=34.4262295081967, Blast_Score=143, Evalue=1e-35, Organism=Escherichia coli, GI1787547, Length=270, Percent_Identity=32.962962962963, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI1789890, Length=239, Percent_Identity=35.9832635983264, Blast_Score=141, Evalue=7e-35, Organism=Escherichia coli, GI1788225, Length=259, Percent_Identity=33.5907335907336, Blast_Score=125, Evalue=5e-30, Organism=Escherichia coli, GI1789891, Length=239, Percent_Identity=35.1464435146443, Blast_Score=124, Evalue=7e-30, Organism=Escherichia coli, GI1786398, Length=248, Percent_Identity=33.0645161290323, Blast_Score=122, Evalue=4e-29, Organism=Escherichia coli, GI1787029, Length=255, Percent_Identity=30.9803921568627, Blast_Score=118, Evalue=6e-28, Organism=Escherichia coli, GI1789032, Length=231, Percent_Identity=31.6017316017316, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1787089, Length=231, Percent_Identity=36.7965367965368, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1790162, Length=254, Percent_Identity=27.9527559055118, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1787370, Length=242, Percent_Identity=30.1652892561983, Blast_Score=101, Evalue=7e-23, Organism=Escherichia coli, GI1789672, Length=254, Percent_Identity=28.3464566929134, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI87081834, Length=234, Percent_Identity=32.9059829059829, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1788761, Length=245, Percent_Identity=26.9387755102041, Blast_Score=98, Evalue=7e-22, Organism=Escherichia coli, GI87081709, Length=253, Percent_Identity=26.8774703557312, Blast_Score=98, Evalue=9e-22, Organism=Escherichia coli, GI1786703, Length=235, Percent_Identity=32.7659574468085, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI87081791, Length=258, Percent_Identity=29.0697674418605, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1788644, Length=180, Percent_Identity=31.6666666666667, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787105, Length=291, Percent_Identity=29.553264604811, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1788450, Length=273, Percent_Identity=27.8388278388278, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1787712, Length=253, Percent_Identity=28.0632411067194, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1786872, Length=218, Percent_Identity=29.8165137614679, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI48994943, Length=254, Percent_Identity=25.9842519685039, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786563, Length=233, Percent_Identity=28.755364806867, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1789873, Length=216, Percent_Identity=29.1666666666667, Blast_Score=78, Evalue=9e-16, Organism=Escherichia coli, GI1786345, Length=241, Percent_Identity=27.3858921161826, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87082267, Length=256, Percent_Identity=26.171875, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786319, Length=230, Percent_Identity=30.8695652173913, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1787164, Length=212, Percent_Identity=28.3018867924528, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790467, Length=235, Percent_Identity=27.2340425531915, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1789991, Length=221, Percent_Identity=25.7918552036199, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI48995001, Length=222, Percent_Identity=29.2792792792793, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786253, Length=220, Percent_Identity=25.9090909090909, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1786803, Length=89, Percent_Identity=39.3258426966292, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1789593, Length=244, Percent_Identity=23.7704918032787, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1788165, Length=231, Percent_Identity=23.8095238095238, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1787792, Length=223, Percent_Identity=28.2511210762332, Blast_Score=68, Evalue=9e-13, Organism=Escherichia coli, GI1790190, Length=230, Percent_Identity=26.0869565217391, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1787112, Length=251, Percent_Identity=27.0916334661355, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1787143, Length=256, Percent_Identity=29.296875, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1790739, Length=105, Percent_Identity=32.3809523809524, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788053, Length=219, Percent_Identity=26.027397260274, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1786653, Length=253, Percent_Identity=26.4822134387352, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1788472, Length=218, Percent_Identity=25.2293577981651, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI193209708, Length=217, Percent_Identity=31.7972350230415, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115534520, Length=245, Percent_Identity=26.9387755102041, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI193202349, Length=247, Percent_Identity=27.9352226720648, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17558664, Length=220, Percent_Identity=29.5454545454545, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193208177, Length=233, Percent_Identity=27.0386266094421, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI212646699, Length=255, Percent_Identity=24.7058823529412, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71984940, Length=245, Percent_Identity=28.9795918367347, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71992285, Length=252, Percent_Identity=26.1904761904762, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17541710, Length=237, Percent_Identity=27.4261603375527, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17569143, Length=209, Percent_Identity=30.622009569378, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=257, Percent_Identity=24.9027237354086, Blast_Score=76, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6319856, Length=224, Percent_Identity=28.125, Blast_Score=70, Evalue=6e-13, Organism=Drosophila melanogaster, GI28574150, Length=300, Percent_Identity=24.6666666666667, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI116007328, Length=240, Percent_Identity=25, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI17136662, Length=248, Percent_Identity=26.6129032258064, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24582014, Length=260, Percent_Identity=26.5384615384615, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24582012, Length=260, Percent_Identity=26.5384615384615, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR010066 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 36342; Mature: 36210
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLDVKELSVHFGDKKTPFKAVDRISYQVAQGEVLGIVGESGSGKSVSSLAIMGLIDHP CCCCCHHHHHEECCCCCCHHHHHHHHHHHEECCEEEEEEECCCCCCCHHHEEEEEEECCC GRVSAESLQFENTNLLTLDNKAKRQLIGADVAMIFQDPMTSLNPAYTVGFQIMEALKTHE CCCCHHHEEECCCCEEEECCHHHHHHHHCHHHEEHHCCCCCCCCHHHHHHHHHHHHHHCC GGTKRARKDRTLELLRLVGIPDPESRMNVYPHQLSGGMSQRVMIAMAIACRPKLLIADEP CCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHCCCCHHHHHHHHHHHCCCEEEEECCC TTALDVTIQAQIMELLLELQKKECMSLILITHDLALVAEAADRIIVMYAGQIVEEGTAKD CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHCCCHHH IFREPKHPYTQALLRSLPEFAEGKSRLASLQGVVPGKYDRPTGCLLNPRCPYATEYCRQV HHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHC EPQLHHIGSRKVKCHTPLNEQGNPVEYQGA CHHHHHCCCCCEEEECCCCCCCCCEECCCC >Mature Secondary Structure ALLDVKELSVHFGDKKTPFKAVDRISYQVAQGEVLGIVGESGSGKSVSSLAIMGLIDHP CCCCHHHHHEECCCCCCHHHHHHHHHHHEECCEEEEEEECCCCCCCHHHEEEEEEECCC GRVSAESLQFENTNLLTLDNKAKRQLIGADVAMIFQDPMTSLNPAYTVGFQIMEALKTHE CCCCHHHEEECCCCEEEECCHHHHHHHHCHHHEEHHCCCCCCCCHHHHHHHHHHHHHHCC GGTKRARKDRTLELLRLVGIPDPESRMNVYPHQLSGGMSQRVMIAMAIACRPKLLIADEP CCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHCCCCHHHHHHHHHHHCCCEEEEECCC TTALDVTIQAQIMELLLELQKKECMSLILITHDLALVAEAADRIIVMYAGQIVEEGTAKD CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHCCCHHH IFREPKHPYTQALLRSLPEFAEGKSRLASLQGVVPGKYDRPTGCLLNPRCPYATEYCRQV HHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHC EPQLHHIGSRKVKCHTPLNEQGNPVEYQGA CHHHHHCCCCCEEEECCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; dipeptides [Periplasm]; H2O [C]
Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800; 8550458 [H]