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The map label for this gene is yfcH [C]

Identifier: 148826184

GI number: 148826184

Start: 1191814

End: 1192704

Strand: Direct

Name: yfcH [C]

Synonym: CGSHiEE_05995

Alternate gene names: 148826184

Gene position: 1191814-1192704 (Clockwise)

Preceding gene: 148826183

Following gene: 148826187

Centisome position: 65.74

GC content: 37.82

Gene sequence:

>891_bases
ATGAATATTCTATTAACAGGAGGAACAGGACTTATCGGCAAAGCACTTGTTGAACAACTTTGCTTACGCAATGAACAAGT
GACGATCTTAACGCGCTCAAGTTCGCCGCACACTCTCTCAAAGCAAAAAAACATCAAATTTATTACCGCACTTTCAGAAC
TCGATTTACAAGAACAGTTTGATGCCATCATCAATCTTGCTGGCGAGCCAATTTTTCATAAAGTTTGGTCGAAAAACCAG
AAATCTATTTTACGAGAAAGTCGTTTAAGCCTCACTACTCAACTGGTTGAATTCATCAATCAGTATCAGCAATACCCAGT
TTTTATATCAGGTTCAGCAACAGGAATTTACGGCGATCAAGACGAACAAACAATTACTGAAACAAGCAAAACAGCAAAAA
CCTTTACCGCACAATTATGCCAAGATTGGGAAAATATCGCGCGACAAGCTAATGCGAGGGTTTGTTTGATTAGAACAGGA
ATAGTCTTTTCTACAAAAAGTGGTGCGCTTGCAAAAATGTTGCCTTTATACAAATGGGGACTTGGCGGTAAACTGGGCAA
TGGAGAACAATATTTTCCATGGATTGCTTTAGAAGATATGGTCAATGGCATTTTATTTTTACTCGATCATTCAGAATGTA
GAGGGGCATTTAACTTCTCAGCCCCGAATCCCATAAAACAGCATAAATTTAACCGCACTTTGGCTGGAATATTAAAACGT
CCTGCCTTTGCAATCATTCCAAAATGGCTATTACATTTCATTCTTGGCGAACGAGCGAATCTATTACTCGAAAGCCAAAA
TGTTGTGCCTGAAAAATTACTCAACTCAGGATTCCAATTTCAGTATTCTGATTGCAAAAACTATCTAGAAGAAATCCTAA
AAAACAAATAA

Upstream 100 bases:

>100_bases
CTATCGCAGGCGATGATACTATTTTTGTCACGCCCACAAGCGATAAACCTATCGACGAATTATTGCAAAATGTCCAACGC
TTATTTGAAAACGCATTGTA

Downstream 100 bases:

>100_bases
AAAAATCACCGCACTTTTTTAATGCGGTGATTTTTATCCCTCTAAATACCTAGCATTTATTGTTCATTATAAATTTCAAG
ATTGGATGCTTGTTTTTCAC

Product: arginine repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MNILLTGGTGLIGKALVEQLCLRNEQVTILTRSSSPHTLSKQKNIKFITALSELDLQEQFDAIINLAGEPIFHKVWSKNQ
KSILRESRLSLTTQLVEFINQYQQYPVFISGSATGIYGDQDEQTITETSKTAKTFTAQLCQDWENIARQANARVCLIRTG
IVFSTKSGALAKMLPLYKWGLGGKLGNGEQYFPWIALEDMVNGILFLLDHSECRGAFNFSAPNPIKQHKFNRTLAGILKR
PAFAIIPKWLLHFILGERANLLLESQNVVPEKLLNSGFQFQYSDCKNYLEEILKNK

Sequences:

>Translated_296_residues
MNILLTGGTGLIGKALVEQLCLRNEQVTILTRSSSPHTLSKQKNIKFITALSELDLQEQFDAIINLAGEPIFHKVWSKNQ
KSILRESRLSLTTQLVEFINQYQQYPVFISGSATGIYGDQDEQTITETSKTAKTFTAQLCQDWENIARQANARVCLIRTG
IVFSTKSGALAKMLPLYKWGLGGKLGNGEQYFPWIALEDMVNGILFLLDHSECRGAFNFSAPNPIKQHKFNRTLAGILKR
PAFAIIPKWLLHFILGERANLLLESQNVVPEKLLNSGFQFQYSDCKNYLEEILKNK
>Mature_296_residues
MNILLTGGTGLIGKALVEQLCLRNEQVTILTRSSSPHTLSKQKNIKFITALSELDLQEQFDAIINLAGEPIFHKVWSKNQ
KSILRESRLSLTTQLVEFINQYQQYPVFISGSATGIYGDQDEQTITETSKTAKTFTAQLCQDWENIARQANARVCLIRTG
IVFSTKSGALAKMLPLYKWGLGGKLGNGEQYFPWIALEDMVNGILFLLDHSECRGAFNFSAPNPIKQHKFNRTLAGILKR
PAFAIIPKWLLHFILGERANLLLESQNVVPEKLLNSGFQFQYSDCKNYLEEILKNK

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=304, Percent_Identity=31.25, Blast_Score=146, Evalue=3e-35,
Organism=Escherichia coli, GI1788642, Length=298, Percent_Identity=41.6107382550336, Blast_Score=243, Evalue=2e-65,
Organism=Drosophila melanogaster, GI28573846, Length=296, Percent_Identity=27.7027027027027, Blast_Score=125, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33370; Mature: 33370

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILLTGGTGLIGKALVEQLCLRNEQVTILTRSSSPHTLSKQKNIKFITALSELDLQEQF
CEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHH
DAIINLAGEPIFHKVWSKNQKSILRESRLSLTTQLVEFINQYQQYPVFISGSATGIYGDQ
HHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCC
DEQTITETSKTAKTFTAQLCQDWENIARQANARVCLIRTGIVFSTKSGALAKMLPLYKWG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEECCCCHHHHHHHHHHCC
LGGKLGNGEQYFPWIALEDMVNGILFLLDHSECRGAFNFSAPNPIKQHKFNRTLAGILKR
CCCCCCCCCCCCCEEEHHHHHCHHEEEEECHHHCCEECCCCCCCHHHHHHHHHHHHHHHC
PAFAIIPKWLLHFILGERANLLLESQNVVPEKLLNSGFQFQYSDCKNYLEEILKNK
CHHHHHHHHHHHHHHCCHHHEEEECCCCCHHHHHCCCCCEEHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNILLTGGTGLIGKALVEQLCLRNEQVTILTRSSSPHTLSKQKNIKFITALSELDLQEQF
CEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHH
DAIINLAGEPIFHKVWSKNQKSILRESRLSLTTQLVEFINQYQQYPVFISGSATGIYGDQ
HHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCC
DEQTITETSKTAKTFTAQLCQDWENIARQANARVCLIRTGIVFSTKSGALAKMLPLYKWG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEECCCCHHHHHHHHHHCC
LGGKLGNGEQYFPWIALEDMVNGILFLLDHSECRGAFNFSAPNPIKQHKFNRTLAGILKR
CCCCCCCCCCCCCEEEHHHHHCHHEEEEECHHHCCEECCCCCCCHHHHHHHHHHHHHHHC
PAFAIIPKWLLHFILGERANLLLESQNVVPEKLLNSGFQFQYSDCKNYLEEILKNK
CHHHHHHHHHHHHHHCCHHHEEEECCCCCHHHHHCCCCCEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]