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The map label for this gene is yohJ [C]

Identifier: 148825880

GI number: 148825880

Start: 874192

End: 874623

Strand: Direct

Name: yohJ [C]

Synonym: CGSHiEE_04225

Alternate gene names: 148825880

Gene position: 874192-874623 (Clockwise)

Preceding gene: 148825874

Following gene: 148825881

Centisome position: 48.22

GC content: 30.56

Gene sequence:

>432_bases
ATGATTCAAAAATTATTTTTATTAGTTCGTTCGTTGGTCATTTTATCTATTATGTTATCTCTCGGAAATCTTATTGCTTA
TTACATTCCATCAGGTGTTCCAGGAAGTATTTGGGGATTGTTATTGCTCTTTTTAGGTTTAACAACACGAGTGATTCATT
TAAATTGGATTTATTTAGGCGCAAGTTTGCTAATTCGTTTTATGGCGGTGCTTTTTGTACCAGTGAGCGTGGGAATTATC
AAATATTCTGATTTATTGATAGAGCAAATTAATATTTTGCTTGTTCCTAATATTGTGAGTACTTGTGTCACTTTACTTGT
TATAGGATTTTTAGGTCATTATTTGTATCAGATGCAATCTTTTACACATAAACGCAAAAAAGTAATAAAACGTAAGAGAA
AATCAGGTAAAACAAGCCAATTAGTATGTTAG

Upstream 100 bases:

>100_bases
GATCTAAGTCTGGTTATTTTACCGAAAAAATGGCTCAAGTCAGAAAAAAAAGCGTAAAATAATTTTGAAATATTATGAAA
ATAGTTGAAAAAGGTTGTAT

Downstream 100 bases:

>100_bases
GAAAGTTTATATGCAGCAGTACATTATTTATCTTTATACATTTTTAACAATTTTTGGGTTTTGGCTCGCACTACAAATTA
GCAAACGTTGGAAGTCAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MIQKLFLLVRSLVILSIMLSLGNLIAYYIPSGVPGSIWGLLLLFLGLTTRVIHLNWIYLGASLLIRFMAVLFVPVSVGII
KYSDLLIEQINILLVPNIVSTCVTLLVIGFLGHYLYQMQSFTHKRKKVIKRKRKSGKTSQLVC

Sequences:

>Translated_143_residues
MIQKLFLLVRSLVILSIMLSLGNLIAYYIPSGVPGSIWGLLLLFLGLTTRVIHLNWIYLGASLLIRFMAVLFVPVSVGII
KYSDLLIEQINILLVPNIVSTCVTLLVIGFLGHYLYQMQSFTHKRKKVIKRKRKSGKTSQLVC
>Mature_143_residues
MIQKLFLLVRSLVILSIMLSLGNLIAYYIPSGVPGSIWGLLLLFLGLTTRVIHLNWIYLGASLLIRFMAVLFVPVSVGII
KYSDLLIEQINILLVPNIVSTCVTLLVIGFLGHYLYQMQSFTHKRKKVIKRKRKSGKTSQLVC

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family

Homologues:

Organism=Escherichia coli, GI1788463, Length=123, Percent_Identity=36.5853658536585, Blast_Score=77, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4225_HAEIE (A5UBU9)

Other databases:

- EMBL:   CP000671
- RefSeq:   YP_001290633.1
- STRING:   A5UBU9
- GeneID:   5225925
- GenomeReviews:   CP000671_GR
- KEGG:   hip:CGSHiEE_04225
- eggNOG:   COG1380
- HOGENOM:   HBG697118
- OMA:   GVMNYYD
- ProtClustDB:   PRK01821
- BioCyc:   HINF374930:CGSHIEE_04225-MONOMER
- HAMAP:   MF_01144
- InterPro:   IPR005538
- InterPro:   IPR022957

Pfam domain/function: PF03788 LrgA

EC number: NA

Molecular weight: Translated: 16131; Mature: 16131

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11c341f0)-; HASH(0x1189de98)-; HASH(0x11fb5e68)-; HASH(0x1160be50)-;

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQKLFLLVRSLVILSIMLSLGNLIAYYIPSGVPGSIWGLLLLFLGLTTRVIHLNWIYLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLLIRFMAVLFVPVSVGIIKYSDLLIEQINILLVPNIVSTCVTLLVIGFLGHYLYQMQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTHKRKKVIKRKRKSGKTSQLVC
HHHHHHHHHHHHHHCCCCCCCCH
>Mature Secondary Structure
MIQKLFLLVRSLVILSIMLSLGNLIAYYIPSGVPGSIWGLLLLFLGLTTRVIHLNWIYLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLLIRFMAVLFVPVSVGIIKYSDLLIEQINILLVPNIVSTCVTLLVIGFLGHYLYQMQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTHKRKKVIKRKRKSGKTSQLVC
HHHHHHHHHHHHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA