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The map label for this gene is rpsA [C]

Identifier: 148825816

GI number: 148825816

Start: 790631

End: 790855

Strand: Direct

Name: rpsA [C]

Synonym: CGSHiEE_03845

Alternate gene names: 148825816

Gene position: 790631-790855 (Clockwise)

Preceding gene: 148825815

Following gene: 148825817

Centisome position: 43.61

GC content: 28.89

Gene sequence:

>225_bases
ATGATTAAATATATTTTAGGTATTGTGATCTTTATTGCTATTGTGTTAGTTGCAATTACCATTGGTGCGAATAACGATCA
GATTATTACATTTAATTATATTGTGGCAGAAAGTCAGTTTCAGCTTTCAAGCCTCGTTGCTATTTTATTTGGGTTAGGTT
TAATTCTTGGTTGGCTAATTACTGCTTTTTTCTATATTAAGTTAAAATTAAAAATATGGCACTAG

Upstream 100 bases:

>100_bases
AAGCTCGAGTGGATGTTCAGGCTTAATTGATTAAAATTTAATTAAAATATTTTTGATTAAAAAGTTTATTTTGGGTTACA
AATATTTTAAAGGAAATGAA

Downstream 100 bases:

>100_bases
CTCGTCAAGTGAAACGTCAGACTTTACAAATCAATGAATTGACGACTACGCGCGATAAGGTCGTTTAATGATAGAATTAC
TCTTTCTATTATTGCCTATT

Product: 30S ribosomal protein S1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MIKYILGIVIFIAIVLVAITIGANNDQIITFNYIVAESQFQLSSLVAILFGLGLILGWLITAFFYIKLKLKIWH

Sequences:

>Translated_74_residues
MIKYILGIVIFIAIVLVAITIGANNDQIITFNYIVAESQFQLSSLVAILFGLGLILGWLITAFFYIKLKLKIWH
>Mature_74_residues
MIKYILGIVIFIAIVLVAITIGANNDQIITFNYIVAESQFQLSSLVAILFGLGLILGWLITAFFYIKLKLKIWH

Specific function: Unknown

COG id: COG3771

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yciS [H]

Homologues:

Organism=Escherichia coli, GI1787535, Length=71, Percent_Identity=38.0281690140845, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010445 [H]

Pfam domain/function: PF06305 DUF1049 [H]

EC number: NA

Molecular weight: Translated: 8342; Mature: 8342

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKYILGIVIFIAIVLVAITIGANNDQIITFNYIVAESQFQLSSLVAILFGLGLILGWLI
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
TAFFYIKLKLKIWH
HHHHHHHHEEEECC
>Mature Secondary Structure
MIKYILGIVIFIAIVLVAITIGANNDQIITFNYIVAESQFQLSSLVAILFGLGLILGWLI
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
TAFFYIKLKLKIWH
HHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]