Click here to switch to the map view.

The map label for this gene is yciM [C]

Identifier: 148825817

GI number: 148825817

Start: 790923

End: 792113

Strand: Direct

Name: yciM [C]

Synonym: CGSHiEE_03850

Alternate gene names: 148825817

Gene position: 790923-792113 (Clockwise)

Preceding gene: 148825816

Following gene: 148825818

Centisome position: 43.62

GC content: 34.51

Gene sequence:

>1191_bases
ATGATAGAATTACTCTTTCTATTATTGCCTATTGCTGCTGCCTATGGCTGGTATATGGGGCGGCGTAGTGCGAAGAAAGA
TCAAGATGACATAAGTAATAAGCTCTCCCGAGATTATGTTACGGGAGTGAATTTTTTACTTTCCAATCAAACTGATAAAG
CTGTAGATTTGTTTTTAGATATGTTGCAAAAGCAAGAAATCGAAAATGAAATCGAAAGTCACTCCCAATTTGAAGCAGAA
CTTACACTTGGCAATCTGTTTCGTTCTCGAGGCGAAGTTGATCGTGCATTGCGCATTCATCAAGCTTTAGATCTTAGTCC
TAATTATACTTTTGAACAAAAATTACTTGCAAAACAACAGCTTGCTCGAGATTTTATGGTGGTTGGTTTTTTTGACCGAG
CTGAGAATCTTTATATTTTACTAGTAGATGAACCTGAGTTTGCAGAAAATGCTTTACAGCAACTTTTAGTGATTTATCAA
AAGACAAAAGAATGGAAAAAAGCAGTCAATATTGCTGAAAAACTCGCTAAAATAAAGCCACAAGAGAATAATATTGAACT
TGCGCAATGTTATTGTGAATATTCACAAAGTTTAGAGCCTGAAAGTGCGGTTGAAAAACGCAGTGTTTTACAAAAGGCTT
TGTCGGTTTCTCCGACTTGTGTTCGTGCTTCTTTATTGCTTGCAAATTTAGCAATGCTTGACGGTCAATATCAACAAGCA
GTAAAAATATTAGAAAATGTTTTGGAGCAAAATCCAGATTATACGGGTGAAATTTTGTTACCTTTAAAACATTGTTACGA
AGAATTAAATCAGTTAGATAATTTTGAGTTATTTCTAATTCGTGCAGGTCAAATTATTAATAATGATGAAGTAGAGCTAG
CTTTGGTTAAATTAATTGAAGAAAAAGATGGCAAATCTGCTGCGCAAGCTAAGCTTTATCAGCAACTCACGAAAAAGCCA
AGTACTTTAATTTTCCATCGTTTTATGCAATATCAAATTGATGATGCAGAAGAGGGACGGGGAAAAGAAAGCTTAATTTT
ATTACATAAAATGGTTGGCGAAAGGATTAAGCAAACATCGCCTTATCGTTGTACAAATTGTGGTTATCAAATCCATAAGC
TATTATGGAATTGCCCATCTTGCCGTCAATGGGAAAGTATTAAACCAGTTTCAAATCAAGAACATAATTAA

Upstream 100 bases:

>100_bases
TATATTAAGTTAAAATTAAAAATATGGCACTAGCTCGTCAAGTGAAACGTCAGACTTTACAAATCAATGAATTGACGACT
ACGCGCGATAAGGTCGTTTA

Downstream 100 bases:

>100_bases
TTGATACTCAGTGAGGTAACACTATGACAAGTAAAATTATTGTGGCATTGGATTATGAGAAAGAAGCAGAGGCTCTTGCT
TTAGTTGATCAAATTGATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MIELLFLLLPIAAAYGWYMGRRSAKKDQDDISNKLSRDYVTGVNFLLSNQTDKAVDLFLDMLQKQEIENEIESHSQFEAE
LTLGNLFRSRGEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPEFAENALQQLLVIYQ
KTKEWKKAVNIAEKLAKIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQYQQA
VKILENVLEQNPDYTGEILLPLKHCYEELNQLDNFELFLIRAGQIINNDEVELALVKLIEEKDGKSAAQAKLYQQLTKKP
STLIFHRFMQYQIDDAEEGRGKESLILLHKMVGERIKQTSPYRCTNCGYQIHKLLWNCPSCRQWESIKPVSNQEHN

Sequences:

>Translated_396_residues
MIELLFLLLPIAAAYGWYMGRRSAKKDQDDISNKLSRDYVTGVNFLLSNQTDKAVDLFLDMLQKQEIENEIESHSQFEAE
LTLGNLFRSRGEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPEFAENALQQLLVIYQ
KTKEWKKAVNIAEKLAKIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQYQQA
VKILENVLEQNPDYTGEILLPLKHCYEELNQLDNFELFLIRAGQIINNDEVELALVKLIEEKDGKSAAQAKLYQQLTKKP
STLIFHRFMQYQIDDAEEGRGKESLILLHKMVGERIKQTSPYRCTNCGYQIHKLLWNCPSCRQWESIKPVSNQEHN
>Mature_396_residues
MIELLFLLLPIAAAYGWYMGRRSAKKDQDDISNKLSRDYVTGVNFLLSNQTDKAVDLFLDMLQKQEIENEIESHSQFEAE
LTLGNLFRSRGEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPEFAENALQQLLVIYQ
KTKEWKKAVNIAEKLAKIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQYQQA
VKILENVLEQNPDYTGEILLPLKHCYEELNQLDNFELFLIRAGQIINNDEVELALVKLIEEKDGKSAAQAKLYQQLTKKP
STLIFHRFMQYQIDDAEEGRGKESLILLHKMVGERIKQTSPYRCTNCGYQIHKLLWNCPSCRQWESIKPVSNQEHN

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=382, Percent_Identity=47.3821989528796, Blast_Score=381, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45670; Mature: 45670

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELLFLLLPIAAAYGWYMGRRSAKKDQDDISNKLSRDYVTGVNFLLSNQTDKAVDLFLD
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
MLQKQEIENEIESHSQFEAELTLGNLFRSRGEVDRALRIHQALDLSPNYTFEQKLLAKQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LARDFMVVGFFDRAENLYILLVDEPEFAENALQQLLVIYQKTKEWKKAVNIAEKLAKIKP
HHHHHHHEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQYQQA
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHH
VKILENVLEQNPDYTGEILLPLKHCYEELNQLDNFELFLIRAGQIINNDEVELALVKLIE
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHH
EKDGKSAAQAKLYQQLTKKPSTLIFHRFMQYQIDDAEEGRGKESLILLHKMVGERIKQTS
HCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PYRCTNCGYQIHKLLWNCPSCRQWESIKPVSNQEHN
CCEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIELLFLLLPIAAAYGWYMGRRSAKKDQDDISNKLSRDYVTGVNFLLSNQTDKAVDLFLD
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
MLQKQEIENEIESHSQFEAELTLGNLFRSRGEVDRALRIHQALDLSPNYTFEQKLLAKQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LARDFMVVGFFDRAENLYILLVDEPEFAENALQQLLVIYQKTKEWKKAVNIAEKLAKIKP
HHHHHHHEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQYQQA
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHH
VKILENVLEQNPDYTGEILLPLKHCYEELNQLDNFELFLIRAGQIINNDEVELALVKLIE
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHH
EKDGKSAAQAKLYQQLTKKPSTLIFHRFMQYQIDDAEEGRGKESLILLHKMVGERIKQTS
HCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PYRCTNCGYQIHKLLWNCPSCRQWESIKPVSNQEHN
CCEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]