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The map label for this gene is yccA [C]

Identifier: 148825676

GI number: 148825676

Start: 620331

End: 620993

Strand: Direct

Name: yccA [C]

Synonym: CGSHiEE_03080

Alternate gene names: 148825676

Gene position: 620331-620993 (Clockwise)

Preceding gene: 148825675

Following gene: 148825677

Centisome position: 34.22

GC content: 36.2

Gene sequence:

>663_bases
ATGCAATCACGTCTTATTGTGGATGCTCAAAAAGAATCGTTACTCAGCACACATAAAGTGTTGCGTAACACGTATTTTTT
ACTGGGATTAACAATGGCTTTTTCAGCGGTTGTTGCGTTTATTTCAATGAGCTTAAACTTGCCCTATCCAAATATTATTG
TGTTATTGGTTGGCTTTTATGGCTTACTTTTCTTAACCAATAAATTAGCTGATCGCCCTGCTGGTATTTTGGCGGCTTTT
GCTTTCACTGGATTTATGGGATACACCATCGGGCCAATTTTAAATATGTATGTGGCACGTGGAATGGAAGATTTGATTAT
GCTTGCATTCGCAGGAACTGCTATCGTGTTTTTTGCGTGTTCCGCTTATGTATTGACTATGAAAAAAGATATGTCATTCT
TATCAAGCGCAATGTTCGCATTATTTATTGTGTTATTGCTTGGTATGGTGGCGAGTTTCTTCTTCCAAATTCCTGCGTTA
TCGGTCGCAATTAGTGCATTATTTGTTGTGTTCTCAACAATGACCATTTTGTATGAAACCAGTAATATTATTCACGGTGG
AGAAACAAATTACATTCGCGCAACCGTGAACATCTATGTTTCAATCTACAATTTATTCTTGAGTTTATTAAGATTACTTT
CTATCTTTTCAAGTGATGAATAA

Upstream 100 bases:

>100_bases
TATTCATTTTGATGAAATTAATTCCATTAATACCATTGACTTTTTTATCCCTAGCCCTTACTTTACAGAAGACTTTTTAT
TTATTTTACAAGGAGCTTTT

Downstream 100 bases:

>100_bases
TGATTGAATTTTGACTTTATGACCCCACTATTTAGTGGGTTATTTTTTGGAATAGGCAATGGAAAAACAAATTTTTGAAC
ATTCAGTTAATGTAGAGGAA

Product: keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MQSRLIVDAQKESLLSTHKVLRNTYFLLGLTMAFSAVVAFISMSLNLPYPNIIVLLVGFYGLLFLTNKLADRPAGILAAF
AFTGFMGYTIGPILNMYVARGMEDLIMLAFAGTAIVFFACSAYVLTMKKDMSFLSSAMFALFIVLLLGMVASFFFQIPAL
SVAISALFVVFSTMTILYETSNIIHGGETNYIRATVNIYVSIYNLFLSLLRLLSIFSSDE

Sequences:

>Translated_220_residues
MQSRLIVDAQKESLLSTHKVLRNTYFLLGLTMAFSAVVAFISMSLNLPYPNIIVLLVGFYGLLFLTNKLADRPAGILAAF
AFTGFMGYTIGPILNMYVARGMEDLIMLAFAGTAIVFFACSAYVLTMKKDMSFLSSAMFALFIVLLLGMVASFFFQIPAL
SVAISALFVVFSTMTILYETSNIIHGGETNYIRATVNIYVSIYNLFLSLLRLLSIFSSDE
>Mature_220_residues
MQSRLIVDAQKESLLSTHKVLRNTYFLLGLTMAFSAVVAFISMSLNLPYPNIIVLLVGFYGLLFLTNKLADRPAGILAAF
AFTGFMGYTIGPILNMYVARGMEDLIMLAFAGTAIVFFACSAYVLTMKKDMSFLSSAMFALFIVLLLGMVASFFFQIPAL
SVAISALFVVFSTMTILYETSNIIHGGETNYIRATVNIYVSIYNLFLSLLRLLSIFSSDE

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787205, Length=210, Percent_Identity=62.8571428571429, Blast_Score=268, Evalue=2e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006213
- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 24276; Mature: 24276

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: PS01243 BI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSRLIVDAQKESLLSTHKVLRNTYFLLGLTMAFSAVVAFISMSLNLPYPNIIVLLVGFY
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GLLFLTNKLADRPAGILAAFAFTGFMGYTIGPILNMYVARGMEDLIMLAFAGTAIVFFAC
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
SAYVLTMKKDMSFLSSAMFALFIVLLLGMVASFFFQIPALSVAISALFVVFSTMTILYET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNIIHGGETNYIRATVNIYVSIYNLFLSLLRLLSIFSSDE
CCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQSRLIVDAQKESLLSTHKVLRNTYFLLGLTMAFSAVVAFISMSLNLPYPNIIVLLVGFY
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GLLFLTNKLADRPAGILAAFAFTGFMGYTIGPILNMYVARGMEDLIMLAFAGTAIVFFAC
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
SAYVLTMKKDMSFLSSAMFALFIVLLLGMVASFFFQIPALSVAISALFVVFSTMTILYET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNIIHGGETNYIRATVNIYVSIYNLFLSLLRLLSIFSSDE
CCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]