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The map label for this gene is ycjF [C]

Identifier: 148825677

GI number: 148825677

Start: 621052

End: 622116

Strand: Direct

Name: ycjF [C]

Synonym: CGSHiEE_03085

Alternate gene names: 148825677

Gene position: 621052-622116 (Clockwise)

Preceding gene: 148825676

Following gene: 148825678

Centisome position: 34.25

GC content: 36.34

Gene sequence:

>1065_bases
ATGGAAAAACAAATTTTTGAACATTCAGTTAATGTAGAGGAAGAACACTATCAGCCCAAGCAAGAATTCCATAATATGGA
AGCAAAGCTAGATGAAGCGTTGGACGGAGAGTTACTTGATGCTCAACTTGGACAAGCATTGAAACCAAAATCCAGTTTTA
GAAAAACTTTATTAAAATTTACCGCACTTTTATTTGGCTTGGCGACGGTTGCACAATCCGTGCAGTGGATTTGGGATAGC
TATCAACAACATCAATGGATTTATCTTGCTTTTGCTTTAGTTAGTTTGATTATCATTTTATTGGGGATTAAAGAGATTAT
TGGCGAGTGGCGACGTTTAGTTCGTTTAAAAAAACGTGAGCAATGGCAACAACAAAGTCAGCAGATTTGGTTAGAAAGTG
CGGTAAAAAATGGCGATGTTTTTTCCGTTCATAACGCAGAAAAAAGTAAAATTCTTTGCTTAGATATTGCAAAATCTTTA
GGTTTGGAAAATGATTCTCCAGCGGTAATTCAATGGCAACACCAATTAAATGAAGCTTATTCGGCGCAAGAAATTGCTCA
TTTATTCAGTCGTCATGTTTTGTCTTCTTTTGATGCACAAGCTAAAAAATTGATTAGTAAAATGGCAGCTGAATCAGCTG
TGATTGTCGCGATTAGTCCACTTGCTGTAGTGGATATGTTTTTTATCGCGTGGCGCAATCTTCGATTGATGAATAAGATT
GCTGAAATTTATGGGATTGAATTAGGGTATTTTTCACGTATTAGATTGTTAAGAATGGTATTGGTCAATATCGCTTTTGC
TGGAGCAACCGAAGTGGCACAAGATATTGGAATGGATTGGCTTTCTCAAGATGTGACAGCAAAATTATCTACACGTATCG
CTCAAGGAATTGGTGTGGGATTACTCACTGCTAGATTAGGCGTGAAAGCAATGGAACTTTGTCGTCCGTTAGCATTTCAA
TTAAACGAAAAACCAAAACTGTCACATATTCAACAGGAATTACTTAGTTCGGTAAAAGATATTGTTCTCGGTAAAAATAA
AATTTACAAAAAGGAGCAAATCTGA

Upstream 100 bases:

>100_bases
AGTTTATTAAGATTACTTTCTATCTTTTCAAGTGATGAATAATGATTGAATTTTGACTTTATGACCCCACTATTTAGTGG
GTTATTTTTTGGAATAGGCA

Downstream 100 bases:

>100_bases
TGGAAATCGAGGTTGTTTATCAACATAGCGATTTTATTATTATCAACAAGCCTGAAGGCATTAGCGTTCATAAAGATCAA
GAAGAACAAGGCTTAACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MEKQIFEHSVNVEEEHYQPKQEFHNMEAKLDEALDGELLDAQLGQALKPKSSFRKTLLKFTALLFGLATVAQSVQWIWDS
YQQHQWIYLAFALVSLIIILLGIKEIIGEWRRLVRLKKREQWQQQSQQIWLESAVKNGDVFSVHNAEKSKILCLDIAKSL
GLENDSPAVIQWQHQLNEAYSAQEIAHLFSRHVLSSFDAQAKKLISKMAAESAVIVAISPLAVVDMFFIAWRNLRLMNKI
AEIYGIELGYFSRIRLLRMVLVNIAFAGATEVAQDIGMDWLSQDVTAKLSTRIAQGIGVGLLTARLGVKAMELCRPLAFQ
LNEKPKLSHIQQELLSSVKDIVLGKNKIYKKEQI

Sequences:

>Translated_354_residues
MEKQIFEHSVNVEEEHYQPKQEFHNMEAKLDEALDGELLDAQLGQALKPKSSFRKTLLKFTALLFGLATVAQSVQWIWDS
YQQHQWIYLAFALVSLIIILLGIKEIIGEWRRLVRLKKREQWQQQSQQIWLESAVKNGDVFSVHNAEKSKILCLDIAKSL
GLENDSPAVIQWQHQLNEAYSAQEIAHLFSRHVLSSFDAQAKKLISKMAAESAVIVAISPLAVVDMFFIAWRNLRLMNKI
AEIYGIELGYFSRIRLLRMVLVNIAFAGATEVAQDIGMDWLSQDVTAKLSTRIAQGIGVGLLTARLGVKAMELCRPLAFQ
LNEKPKLSHIQQELLSSVKDIVLGKNKIYKKEQI
>Mature_354_residues
MEKQIFEHSVNVEEEHYQPKQEFHNMEAKLDEALDGELLDAQLGQALKPKSSFRKTLLKFTALLFGLATVAQSVQWIWDS
YQQHQWIYLAFALVSLIIILLGIKEIIGEWRRLVRLKKREQWQQQSQQIWLESAVKNGDVFSVHNAEKSKILCLDIAKSL
GLENDSPAVIQWQHQLNEAYSAQEIAHLFSRHVLSSFDAQAKKLISKMAAESAVIVAISPLAVVDMFFIAWRNLRLMNKI
AEIYGIELGYFSRIRLLRMVLVNIAFAGATEVAQDIGMDWLSQDVTAKLSTRIAQGIGVGLLTARLGVKAMELCRPLAFQ
LNEKPKLSHIQQELLSSVKDIVLGKNKIYKKEQI

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family [H]

Homologues:

Organism=Escherichia coli, GI1787582, Length=345, Percent_Identity=41.1594202898551, Blast_Score=264, Evalue=5e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021147
- InterPro:   IPR006507 [H]

Pfam domain/function: PF05128 DUF697 [H]

EC number: NA

Molecular weight: Translated: 40278; Mature: 40278

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKQIFEHSVNVEEEHYQPKQEFHNMEAKLDEALDGELLDAQLGQALKPKSSFRKTLLKF
CCCCHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHH
TALLFGLATVAQSVQWIWDSYQQHQWIYLAFALVSLIIILLGIKEIIGEWRRLVRLKKRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QWQQQSQQIWLESAVKNGDVFSVHNAEKSKILCLDIAKSLGLENDSPAVIQWQHQLNEAY
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCHHEHHHHHHHHHH
SAQEIAHLFSRHVLSSFDAQAKKLISKMAAESAVIVAISPLAVVDMFFIAWRNLRLMNKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
AEIYGIELGYFSRIRLLRMVLVNIAFAGATEVAQDIGMDWLSQDVTAKLSTRIAQGIGVG
HHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
LLTARLGVKAMELCRPLAFQLNEKPKLSHIQQELLSSVKDIVLGKNKIYKKEQI
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHCCHHCCC
>Mature Secondary Structure
MEKQIFEHSVNVEEEHYQPKQEFHNMEAKLDEALDGELLDAQLGQALKPKSSFRKTLLKF
CCCCHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHH
TALLFGLATVAQSVQWIWDSYQQHQWIYLAFALVSLIIILLGIKEIIGEWRRLVRLKKRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QWQQQSQQIWLESAVKNGDVFSVHNAEKSKILCLDIAKSLGLENDSPAVIQWQHQLNEAY
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCHHEHHHHHHHHHH
SAQEIAHLFSRHVLSSFDAQAKKLISKMAAESAVIVAISPLAVVDMFFIAWRNLRLMNKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
AEIYGIELGYFSRIRLLRMVLVNIAFAGATEVAQDIGMDWLSQDVTAKLSTRIAQGIGVG
HHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
LLTARLGVKAMELCRPLAFQLNEKPKLSHIQQELLSSVKDIVLGKNKIYKKEQI
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]