Click here to switch to the map view.

The map label for this gene is ppdD [C]

Identifier: 148825421

GI number: 148825421

Start: 289860

End: 290000

Strand: Direct

Name: ppdD [C]

Synonym: CGSHiEE_01555

Alternate gene names: 148825421

Gene position: 289860-290000 (Clockwise)

Preceding gene: 148825414

Following gene: 148825422

Centisome position: 15.99

GC content: 32.62

Gene sequence:

>141_bases
ATGAAACTAACAACACAGCAAACCTTGAAAAAAGGGTTTACATTAATAGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATCCCCTCTTATCAAAATTATACTAAAAAAGACAGCGGTATCTGA

Upstream 100 bases:

>100_bases
TTTGCGATCAGGCTCGCAGAAAAAGTGCGGTCAATTTTACAAACAAATTTTTCCTTTTCACAATGTCGTCGCTAACAAAG
GTCTAATAAAAGGAAAATAA

Downstream 100 bases:

>100_bases
ATTACTGCAAGCGTCAGCGCCTTATAAGGCTGATGTGGAATTATGTGTATATAGCACAAATGAAGCAACAAAGTGTACGG
GTGGAAAAAATGGTATTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 46; Mature: 46

Protein sequence:

>46_residues
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKDSGI

Sequences:

>Translated_46_residues
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKDSGI
>Mature_46_residues
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKDSGI

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5097; Mature: 5097

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKDSGI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKDSGI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA