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The map label for this gene is ppdD [H]

Identifier: 148825422

GI number: 148825422

Start: 290035

End: 290310

Strand: Direct

Name: ppdD [H]

Synonym: CGSHiEE_01560

Alternate gene names: 148825422

Gene position: 290035-290310 (Clockwise)

Preceding gene: 148825421

Following gene: 148825423

Centisome position: 16.0

GC content: 39.86

Gene sequence:

>276_bases
GTGGAATTATGTGTATATAGCACAAATGAAGCAACAAAGTGTACGGGTGGAAAAAATGGTATTGCAGCAGATATAACCAC
AGCAAAAGGCTATGTAAAATCAGTGACAACAAGCAACGGTGCAATAACAGTAAAAGGGGATGGCACATTGGCAAATATGG
AATATATTTTGCAAGCCAGTGGTAATGCTGCAACAGGTGTAACTTGGACAACAACTTGCAAAGGAACGGATGCCTCTTTA
TTTCCAGCAAATTTTTGCGGAAGTGTCACACAATGA

Upstream 100 bases:

>100_bases
GCTATTTTAGCCACTATCGCAATCCCCTCTTATCAAAATTATACTAAAAAAGACAGCGGTATCTGAATTACTGCAAGCGT
CAGCGCCTTATAAGGCTGAT

Downstream 100 bases:

>100_bases
CGAGTTATGCTTTACTTCATACTCAGCGTGTAACCGCTCAAAATGGCGAGATCTTTACGATCTCGTCTGATTTATGGGCG
CGTAATCAACAACAGCAATC

Product: type IV pilin subunit protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MELCVYSTNEATKCTGGKNGIAADITTAKGYVKSVTTSNGAITVKGDGTLANMEYILQASGNAATGVTWTTTCKGTDASL
FPANFCGSVTQ

Sequences:

>Translated_91_residues
MELCVYSTNEATKCTGGKNGIAADITTAKGYVKSVTTSNGAITVKGDGTLANMEYILQASGNAATGVTWTTTCKGTDASL
FPANFCGSVTQ
>Mature_91_residues
MELCVYSTNEATKCTGGKNGIAADITTAKGYVKSVTTSNGAITVKGDGTLANMEYILQASGNAATGVTWTTTCKGTDASL
FPANFCGSVTQ

Specific function: Unknown

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 9252; Mature: 9252

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELCVYSTNEATKCTGGKNGIAADITTAKGYVKSVTTSNGAITVKGDGTLANMEYILQAS
CEEEEEECCCCEEECCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCEECEEEEEEEC
GNAATGVTWTTTCKGTDASLFPANFCGSVTQ
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MELCVYSTNEATKCTGGKNGIAADITTAKGYVKSVTTSNGAITVKGDGTLANMEYILQAS
CEEEEEECCCCEEECCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCEECEEEEEEEC
GNAATGVTWTTTCKGTDASLFPANFCGSVTQ
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]