| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824917
Identifier: 148824917
GI number: 148824917
Start: 4169982
End: 4171223
Strand: Direct
Name: 148824917
Synonym: TBFG_13744
Alternate gene names: NA
Gene position: 4169982-4171223 (Clockwise)
Preceding gene: 148824915
Following gene: 148824918
Centisome position: 94.25
GC content: 70.45
Gene sequence:
>1242_bases GTGGTAACCACCCGGGCACGCCTGGCCCTAGCCGCCGGCGCGGGCGCACGCTGGGCGTCGCGGGTCACCGGTCGCGGCGC CGGAGCGATGATCGGCGGTCTGGTCGCCATGACCCTGGACCGCTCGATCCTGCGCCAACTCGGGATGGGCCGGCGCACCG TCGTCGTCACCGGCACCAACGGCAAGTCGACCACCACACGGATGACCGCGGCCGCGCTGGGCACGTTGGGAGCCGTGGCC ACCAACGCCGAGGGCGCCAACATGGACGCCGGCCTGGTGGCCGCGCTCGCCGCTCACCGCGACGCCGAGCTGGCGGTGCT GGAAGTCGACGAGATGCACGTACCGCACATCTCCGATGCCGTCGATCCCGCCGTCGTCGTCTTGCTCAACCTCTCCCGAG ACCAGCTGGACCGGGTCGGCGAGATCAACGTCATCGAACGCACACTGCGGGCCGGGCTGGCCCGGCACCCCGACGCTGTC GTGGTCGCCAACTGCGACGACGTGCTGATGACCTCGGCCGCCTACGACAGCCCCAACGTCGTTTGGGTGGCTGCCGGCGG CGCGTGGTCAAACGATTCGGTCAGCTGCCCGCGCAGCGGCGAGGTCATCGTTCGCAAGGCCCCCTCTCAGGAAGACCACT GGTACTCCACCGGCGCCGACTTCAAGCGGCCCGCCCCGCACTGGTGGTTCGACGACGCCACGCTGTATGGGCCCGACGGG CTGGCGCTGCCGATGCGGCTGGCACTGCCAGGCTCGGTGAATCGCGGCAACGCCGCCCAAGCCGTGGCCGCCGCAGTCGC CCTCGGCGCCGATCCGGCTGTGGCCGTCGCCGCCGTCTGCCAGGTCGACGAGGTCGCCGGACGCTACCGGACCGTTCGTA TCGGCGCGCACCAAGCCCGGATCCTGCTGGCCAAAAACCCGGCCGGCTGGCAGGAAGCGCTGGCGATGGTCGACAAGCAT GCAGACGGGGTGGTCATCGCGGTCAACGGGCGGGTTCCTGACGGCGAGGACCTGTCCTGGTTGTGGGACGTGCGCTTCGA GCACTTCGAGAAGACCCGAGTGGTAGCCGCTGGGGAGCGCGGCACCGATTTGGCGGTTCGCCTCGGATATGCAGGCGTCG AGCACACCCTGGTGCACGACACCGTGGCCGCCATCGCCTCATGCCCACCCGGGCGGGTGGAGGTCGTCGCCAACTACACC GCGTTCCTGCAGCTGCAACGAGCATTGGCGCGTCGTGGCTGA
Upstream 100 bases:
>100_bases GCGACAAGCGCCGAGCTTGCGATCGCCCTGAATCCAACGCGGGCGACCCGCCGCACCCGGCGACAAGCGCCGAGCTTGCG ATCGCCCGTAAACTGCCCGG
Downstream 100 bases:
>100_bases TTCTGTGGTGCGGATCGGGCTCGTGCTGCCCGACGTGATGGGCACCTACGGCGACGGCGGCAACGCCGTGGTGCTACGAC AGCGGCTGCTGCTGCGCGGC
Product: ligase
Products: NA
Alternate protein names: Mur Ligase Family Protein; UDP-N-Acetylmuramyl Tripeptide Synthetase; Ligase; Mur Ligase; UDP-N-Acetylmuramoylalanine-D-Glutamate Ligase; UDP-N-Acetylmuramyl Tripeptide Synthase-Like Protein; Murein Ligase; UDP-N-Acetylmuramoyl-L-Alanyl-D-Glutamate-Lysine Ligase; Mur Ligase Middle Domain Protein; UDP-N-Acetylmuramyl Peptide Synthetase
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTLGAVA TNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAV VVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILLAKNPAGWQEALAMVDKH ADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYT AFLQLQRALARRG
Sequences:
>Translated_413_residues MVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTLGAVA TNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAV VVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILLAKNPAGWQEALAMVDKH ADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYT AFLQLQRALARRG >Mature_413_residues MVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTLGAVA TNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAV VVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILLAKNPAGWQEALAMVDKH ADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYT AFLQLQRALARRG
Specific function: Unknown
COG id: COG0769
COG function: function code M; UDP-N-acetylmuramyl tripeptide synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43422; Mature: 43422
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN CCCCCCEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA CCCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV CCCEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHEECCCCCCCCE VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG EEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR CCEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEECCEEE ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGER EEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEHHHHHHCCEEEEEECCC GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG CCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCC >Mature Secondary Structure MVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN CCCCCCEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA CCCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV CCCEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHEECCCCCCCCE VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG EEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR CCEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEECCEEE ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGER EEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEHHHHHHCCEEEEEECCC GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG CCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA