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The map label for this gene is cobQ [H]

Identifier: 148824918

GI number: 148824918

Start: 4171228

End: 4171923

Strand: Direct

Name: cobQ [H]

Synonym: TBFG_13745

Alternate gene names: 148824918

Gene position: 4171228-4171923 (Clockwise)

Preceding gene: 148824917

Following gene: 148824922

Centisome position: 94.28

GC content: 69.4

Gene sequence:

>696_bases
GTGGTGCGGATCGGGCTCGTGCTGCCCGACGTGATGGGCACCTACGGCGACGGCGGCAACGCCGTGGTGCTACGACAGCG
GCTGCTGCTGCGCGGCATCGCCGCCGAGATCGTCGAGATCACGCTGGCCGATCCAGTGCCGGATTCGCTGGACCTCTACA
CGCTGGGCGGAGCGGAGGACTACGCGCAGCGGCTGGCCACCCGGCACCTACGTCGATATCCGGGCCTGCAACGCGCGGCG
GGCCGGGGTGCTCCAGTATTGGCGATCTGCGCGGCCATCCAGGTGCTTGGGCACTGGTACGAGACGTCGTCGGGAGACCG
GGTCGACGGCGTGGGGTTGCTGGATGTGACCACGTCACCGCAGGATGCGCGCACCATCGGCGAGTTGGTCAGCAAGCCGT
TGCTGGCCGGTTTGACCCAACCCTTGACCGGTTTTGAGAACCACCGCGGCGGCACCGTCCTCGGGCCCGGAACGTCGCCC
TTGGGCGCGGTGGTCAAGGGAGCCGGCAACCGGGCCGGCGACGGTTTTGATGGCGCGGTTGCGGGCAGCGTGGTCGCGAC
CTACATGCACGGGCCGTGCCTGGCCCGCAACCCGGAGCTTGCCGACCTGCTGCTGAGCAAGGTGGTTGGTGAGCTGGCGC
CGCTGGATTTGCCCGAGGTGGACCTGCTGCGCCGCGAACGGCTATCCGCGCGTTAG

Upstream 100 bases:

>100_bases
GCCGCCATCGCCTCATGCCCACCCGGGCGGGTGGAGGTCGTCGCCAACTACACCGCGTTCCTGCAGCTGCAACGAGCATT
GGCGCGTCGTGGCTGATTCT

Downstream 100 bases:

>100_bases
GTGGGGCGTTAGGGCCGCCATCCCCTGGCCAGCAGAGCGGCACGCACGCGGTTCACCACGTCGTCGGGGTTGTCCTCGGC
GATCACGCGAATGACGATCC

Product: cobyric acid synthase cobQ2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MVRIGLVLPDVMGTYGDGGNAVVLRQRLLLRGIAAEIVEITLADPVPDSLDLYTLGGAEDYAQRLATRHLRRYPGLQRAA
GRGAPVLAICAAIQVLGHWYETSSGDRVDGVGLLDVTTSPQDARTIGELVSKPLLAGLTQPLTGFENHRGGTVLGPGTSP
LGAVVKGAGNRAGDGFDGAVAGSVVATYMHGPCLARNPELADLLLSKVVGELAPLDLPEVDLLRRERLSAR

Sequences:

>Translated_231_residues
MVRIGLVLPDVMGTYGDGGNAVVLRQRLLLRGIAAEIVEITLADPVPDSLDLYTLGGAEDYAQRLATRHLRRYPGLQRAA
GRGAPVLAICAAIQVLGHWYETSSGDRVDGVGLLDVTTSPQDARTIGELVSKPLLAGLTQPLTGFENHRGGTVLGPGTSP
LGAVVKGAGNRAGDGFDGAVAGSVVATYMHGPCLARNPELADLLLSKVVGELAPLDLPEVDLLRRERLSAR
>Mature_231_residues
MVRIGLVLPDVMGTYGDGGNAVVLRQRLLLRGIAAEIVEITLADPVPDSLDLYTLGGAEDYAQRLATRHLRRYPGLQRAA
GRGAPVLAICAAIQVLGHWYETSSGDRVDGVGLLDVTTSPQDARTIGELVSKPLLAGLTQPLTGFENHRGGTVLGPGTSP
LGAVVKGAGNRAGDGFDGAVAGSVVATYMHGPCLARNPELADLLLSKVVGELAPLDLPEVDLLRRERLSAR

Specific function: Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation [H]

COG id: COG3442

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GATase cobBQ-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR017929
- InterPro:   IPR004459
- InterPro:   IPR011698 [H]

Pfam domain/function: PF01656 CbiA; PF07685 GATase_3 [H]

EC number: NA

Molecular weight: Translated: 24158; Mature: 24158

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRIGLVLPDVMGTYGDGGNAVVLRQRLLLRGIAAEIVEITLADPVPDSLDLYTLGGAED
CEEECEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHH
YAQRLATRHLRRYPGLQRAAGRGAPVLAICAAIQVLGHWYETSSGDRVDGVGLLDVTTSP
HHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
QDARTIGELVSKPLLAGLTQPLTGFENHRGGTVLGPGTSPLGAVVKGAGNRAGDGFDGAV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCHHH
AGSVVATYMHGPCLARNPELADLLLSKVVGELAPLDLPEVDLLRRERLSAR
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MVRIGLVLPDVMGTYGDGGNAVVLRQRLLLRGIAAEIVEITLADPVPDSLDLYTLGGAED
CEEECEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHH
YAQRLATRHLRRYPGLQRAAGRGAPVLAICAAIQVLGHWYETSSGDRVDGVGLLDVTTSP
HHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
QDARTIGELVSKPLLAGLTQPLTGFENHRGGTVLGPGTSPLGAVVKGAGNRAGDGFDGAV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCHHH
AGSVVATYMHGPCLARNPELADLLLSKVVGELAPLDLPEVDLLRRERLSAR
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]